BLASTX nr result
ID: Cheilocostus21_contig00035868
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00035868
(1711 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009384758.2| PREDICTED: pentatricopeptide repeat-containi... 92 5e-16
ref|XP_020241462.1| pentatricopeptide repeat-containing protein ... 87 1e-14
ref|XP_020113856.1| pentatricopeptide repeat-containing protein ... 83 4e-13
ref|XP_020111386.1| pentatricopeptide repeat-containing protein ... 83 4e-13
ref|XP_008803027.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 79 7e-12
ref|XP_010278398.1| PREDICTED: pentatricopeptide repeat-containi... 77 1e-11
ref|XP_020184992.1| pentatricopeptide repeat-containing protein ... 77 1e-11
ref|NP_001143211.1| uncharacterized protein LOC100275714 [Zea ma... 77 2e-11
gb|OQU78200.1| hypothetical protein SORBI_3009G176300 [Sorghum b... 75 2e-11
ref|XP_019055866.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-11
gb|OQU78198.1| hypothetical protein SORBI_3009G176300 [Sorghum b... 75 2e-11
ref|XP_010278397.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-11
ref|XP_008647638.1| uncharacterized protein LOC100275714 isoform... 77 3e-11
gb|ACR38556.1| unknown [Zea mays] >gi|1142828701|gb|AQK86788.1| ... 77 3e-11
gb|OQU78199.1| hypothetical protein SORBI_3009G176300 [Sorghum b... 75 3e-11
gb|PKU85432.1| Pentatricopeptide repeat-containing protein [Dend... 75 5e-11
gb|OQU78201.1| hypothetical protein SORBI_3009G176300 [Sorghum b... 75 5e-11
ref|XP_002439972.1| pentatricopeptide repeat-containing protein ... 75 7e-11
gb|OMO98801.1| hypothetical protein COLO4_13684 [Corchorus olito... 69 8e-11
ref|XP_009351444.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-10
>ref|XP_009384758.2| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
[Musa acuminata subsp. malaccensis]
Length = 520
Score = 92.4 bits (228), Expect = 5e-16
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G+VEDA FEEMK+ Q PSVY YRS++S+LKRAGKFELA LS+EMN +TTKLAGPEDF
Sbjct: 447 GHVEDALGTFEEMKKSQHPSVYAYRSVISDLKRAGKFELALRLSAEMNSSTTKLAGPEDF 506
Query: 183 KE 188
K+
Sbjct: 507 KQ 508
>ref|XP_020241462.1| pentatricopeptide repeat-containing protein At1g11900-like
[Asparagus officinalis]
gb|ONK61751.1| uncharacterized protein A4U43_C08F33200 [Asparagus officinalis]
Length = 423
Score = 87.4 bits (215), Expect = 1e-14
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G+V DA RLF+EMK Q PSVYVYR+++SNLK+AG+FELA +LS EMN ++ KL GPEDF
Sbjct: 347 GHVNDAMRLFDEMKRSQIPSVYVYRAMISNLKKAGRFELALNLSEEMNSSSMKLIGPEDF 406
Query: 183 K 185
K
Sbjct: 407 K 407
>ref|XP_020113856.1| pentatricopeptide repeat-containing protein At1g11900-like [Ananas
comosus]
Length = 414
Score = 82.8 bits (203), Expect = 4e-13
Identities = 37/61 (60%), Positives = 51/61 (83%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G+VE+A +F EMK+ Q PS+Y+YR+++S+LKRAGKFELA +LS EMN ++KL GP+DF
Sbjct: 346 GHVEEALNMFSEMKKSQQPSIYIYRALISDLKRAGKFELALNLSEEMNSTSSKLIGPKDF 405
Query: 183 K 185
K
Sbjct: 406 K 406
>ref|XP_020111386.1| pentatricopeptide repeat-containing protein At1g11900-like [Ananas
comosus]
gb|OAY67276.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 414
Score = 82.8 bits (203), Expect = 4e-13
Identities = 37/61 (60%), Positives = 51/61 (83%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G+VE+A +F EMK+ Q PS+Y+YR+++S+LKRAGKFELA +LS EMN ++KL GP+DF
Sbjct: 346 GHVEEALNMFSEMKKSQQPSIYIYRALISDLKRAGKFELALNLSEEMNSTSSKLIGPKDF 405
Query: 183 K 185
K
Sbjct: 406 K 406
>ref|XP_008803027.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11900 [Phoenix dactylifera]
Length = 436
Score = 79.0 bits (193), Expect = 7e-12
Identities = 35/61 (57%), Positives = 49/61 (80%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G+ EDA +F EMK+ PS+YVYR++++NLK+AGKFE A +L +EMN +T+KL GPEDF
Sbjct: 359 GHAEDALNIFHEMKKSLHPSIYVYRALINNLKKAGKFECALNLYAEMNSSTSKLVGPEDF 418
Query: 183 K 185
+
Sbjct: 419 R 419
>ref|XP_010278398.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
isoform X3 [Nelumbo nucifera]
Length = 309
Score = 77.0 bits (188), Expect = 1e-11
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQ-CPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPED 179
G VE++ RLF +MK CPS+YVYRS++SNLK+AGK ELA +LS+EMN + L GP+D
Sbjct: 245 GNVEESLRLFTDMKRRSICPSIYVYRSLISNLKKAGKLELAINLSAEMNSRASDLVGPKD 304
Query: 180 FK 185
FK
Sbjct: 305 FK 306
>ref|XP_020184992.1| pentatricopeptide repeat-containing protein At1g11900 [Aegilops
tauschii subsp. tauschii]
Length = 363
Score = 77.4 bits (189), Expect = 1e-11
Identities = 33/62 (53%), Positives = 48/62 (77%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G++ DA FE+MK+ PS+YVYR+++S++K+AG+FELA L+ EMN + + L GPEDF
Sbjct: 290 GHIADALEAFEQMKKSHQPSIYVYRALISDMKKAGRFELAQKLTDEMNSSASDLLGPEDF 349
Query: 183 KE 188
KE
Sbjct: 350 KE 351
>ref|NP_001143211.1| uncharacterized protein LOC100275714 [Zea mays]
gb|ACG29752.1| hypothetical protein [Zea mays]
Length = 377
Score = 77.4 bits (189), Expect = 2e-11
Identities = 34/63 (53%), Positives = 48/63 (76%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G++ +A +F EMK+ PSVYVYR++ SNLK+AG+FELA L+ +MN + ++L GPEDF
Sbjct: 305 GHITEALEMFHEMKKSHQPSVYVYRALTSNLKKAGQFELAQKLTEDMNSSASELIGPEDF 364
Query: 183 KEN 191
K N
Sbjct: 365 KAN 367
>gb|OQU78200.1| hypothetical protein SORBI_3009G176300 [Sorghum bicolor]
Length = 250
Score = 75.5 bits (184), Expect = 2e-11
Identities = 32/61 (52%), Positives = 49/61 (80%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G++ DA +F++MK+ PSVYVYR+++SNLK+AG+FELA L+ +M+ + ++L GPEDF
Sbjct: 178 GHITDALEMFQKMKKSHQPSVYVYRALISNLKKAGQFELAEKLTEDMSSSASELIGPEDF 237
Query: 183 K 185
K
Sbjct: 238 K 238
>ref|XP_019055866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
isoform X2 [Nelumbo nucifera]
Length = 357
Score = 77.0 bits (188), Expect = 2e-11
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQ-CPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPED 179
G VE++ RLF +MK CPS+YVYRS++SNLK+AGK ELA +LS+EMN + L GP+D
Sbjct: 293 GNVEESLRLFTDMKRRSICPSIYVYRSLISNLKKAGKLELAINLSAEMNSRASDLVGPKD 352
Query: 180 FK 185
FK
Sbjct: 353 FK 354
>gb|OQU78198.1| hypothetical protein SORBI_3009G176300 [Sorghum bicolor]
Length = 261
Score = 75.5 bits (184), Expect = 2e-11
Identities = 32/61 (52%), Positives = 49/61 (80%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G++ DA +F++MK+ PSVYVYR+++SNLK+AG+FELA L+ +M+ + ++L GPEDF
Sbjct: 189 GHITDALEMFQKMKKSHQPSVYVYRALISNLKKAGQFELAEKLTEDMSSSASELIGPEDF 248
Query: 183 K 185
K
Sbjct: 249 K 249
>ref|XP_010278397.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
isoform X1 [Nelumbo nucifera]
Length = 379
Score = 77.0 bits (188), Expect = 2e-11
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQ-CPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPED 179
G VE++ RLF +MK CPS+YVYRS++SNLK+AGK ELA +LS+EMN + L GP+D
Sbjct: 315 GNVEESLRLFTDMKRRSICPSIYVYRSLISNLKKAGKLELAINLSAEMNSRASDLVGPKD 374
Query: 180 FK 185
FK
Sbjct: 375 FK 376
>ref|XP_008647638.1| uncharacterized protein LOC100275714 isoform X1 [Zea mays]
Length = 366
Score = 76.6 bits (187), Expect = 3e-11
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G++ +A +F EMK+ PSVYVYR++ SNLK+AG FELA L+ +MN + ++L GPEDF
Sbjct: 294 GHITEALEMFHEMKKSHQPSVYVYRALTSNLKKAGHFELAQKLTEDMNSSASELIGPEDF 353
Query: 183 KEN 191
K N
Sbjct: 354 KPN 356
>gb|ACR38556.1| unknown [Zea mays]
gb|AQK86788.1| Pentatricopeptide repeat-containing protein [Zea mays]
Length = 377
Score = 76.6 bits (187), Expect = 3e-11
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G++ +A +F EMK+ PSVYVYR++ SNLK+AG FELA L+ +MN + ++L GPEDF
Sbjct: 305 GHITEALEMFHEMKKSHQPSVYVYRALTSNLKKAGHFELAQKLTEDMNSSASELIGPEDF 364
Query: 183 KEN 191
K N
Sbjct: 365 KPN 367
>gb|OQU78199.1| hypothetical protein SORBI_3009G176300 [Sorghum bicolor]
Length = 290
Score = 75.5 bits (184), Expect = 3e-11
Identities = 32/61 (52%), Positives = 49/61 (80%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G++ DA +F++MK+ PSVYVYR+++SNLK+AG+FELA L+ +M+ + ++L GPEDF
Sbjct: 218 GHITDALEMFQKMKKSHQPSVYVYRALISNLKKAGQFELAEKLTEDMSSSASELIGPEDF 277
Query: 183 K 185
K
Sbjct: 278 K 278
>gb|PKU85432.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 290
Score = 74.7 bits (182), Expect = 5e-11
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G+V DA LF EMK+ PS+YVYRS++SNLK+ GK E A L EMN +T+KL GPEDF
Sbjct: 222 GHVNDAVILFGEMKKCHRPSIYVYRSMISNLKKFGKIEEAMDLLKEMNSSTSKLVGPEDF 281
Query: 183 KE 188
++
Sbjct: 282 RK 283
>gb|OQU78201.1| hypothetical protein SORBI_3009G176300 [Sorghum bicolor]
Length = 351
Score = 75.5 bits (184), Expect = 5e-11
Identities = 32/61 (52%), Positives = 49/61 (80%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G++ DA +F++MK+ PSVYVYR+++SNLK+AG+FELA L+ +M+ + ++L GPEDF
Sbjct: 279 GHITDALEMFQKMKKSHQPSVYVYRALISNLKKAGQFELAEKLTEDMSSSASELIGPEDF 338
Query: 183 K 185
K
Sbjct: 339 K 339
>ref|XP_002439972.1| pentatricopeptide repeat-containing protein At1g11900 [Sorghum
bicolor]
gb|EES18402.1| hypothetical protein SORBI_3009G176300 [Sorghum bicolor]
Length = 377
Score = 75.5 bits (184), Expect = 7e-11
Identities = 32/61 (52%), Positives = 49/61 (80%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQCPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPEDF 182
G++ DA +F++MK+ PSVYVYR+++SNLK+AG+FELA L+ +M+ + ++L GPEDF
Sbjct: 305 GHITDALEMFQKMKKSHQPSVYVYRALISNLKKAGQFELAEKLTEDMSSSASELIGPEDF 364
Query: 183 K 185
K
Sbjct: 365 K 365
>gb|OMO98801.1| hypothetical protein COLO4_13684 [Corchorus olitorius]
Length = 75
Score = 68.6 bits (166), Expect = 8e-11
Identities = 35/63 (55%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQC-PSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNT-TKLAGPE 176
G +A RLF EMK+ Q PS++ YRS+++NLK+AGK +LA+SL EMN ++ + LAGPE
Sbjct: 9 GNTNEALRLFSEMKQRQIRPSIHTYRSLINNLKKAGKLDLANSLLEEMNSSSPSDLAGPE 68
Query: 177 DFK 185
DFK
Sbjct: 69 DFK 71
>ref|XP_009351444.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
[Pyrus x bretschneideri]
Length = 360
Score = 74.7 bits (182), Expect = 1e-10
Identities = 37/64 (57%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 GYVEDAFRLFEEMKELQ-CPSVYVYRSIVSNLKRAGKFELAHSLSSEMNLNTTKLAGPED 179
G VE+A R F+EMK CPS+YVYRS+++NLK+ GK +LA SL+ EMN ++LAGP D
Sbjct: 294 GNVEEALRFFDEMKARHICPSLYVYRSLITNLKKMGKVDLALSLTEEMNSCDSELAGPMD 353
Query: 180 FKEN 191
FK N
Sbjct: 354 FKRN 357