BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00035834
         (3786 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY74722.1| putative ribonuclease H protein [Ananas comosus]        53   2e-07
ref|XP_020096969.1| uncharacterized protein LOC109716078, partia...    52   5e-07

>gb|OAY74722.1| putative ribonuclease H protein [Ananas comosus]
          Length = 851

 Score = 52.8 bits (125), Expect(2) = 2e-07
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
 Frame = +1

Query: 265 KYTENLNKYSCQS---TNGIHMLNWNTIISHANFGSLSMKDFTLFRIAIQYKCILDLLNH 435
           K T+ + K+  +      G+H++ W+ I      G LS ++    R A   +  L LLN+
Sbjct: 310 KITQIIRKFLWEKHGGKKGMHLIAWDNITKPLTEGGLSFRNLRKSREAFMARNALKLLNN 369

Query: 436 KPTIWISLVMAKYGIPNPR*ITWFRHMSWSWRGFT-RFEFLESGTPELC*EWQDTSILNH 612
               W+ ++  KYG  +P         SW+WR      + ++ G      +  +T+ L H
Sbjct: 370 INLPWVRIMKGKYGELDPWKNPKLTTTSWAWRALNYTVQAIKLGLQISISDGLNTNFLEH 429

Query: 613 A*CLDLPIYCKPTFISTD 666
                 P   KPTFI+T+
Sbjct: 430 PWLFTTPFSKKPTFIATN 447



 Score = 34.3 bits (77), Expect(2) = 2e-07
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +2

Query: 155 LGSWWGNFISQASRAALVNSTIITSPIHALISTWLPESTL 274
           L SW  N +S A RA L+ +T+   P + + ++W+P+S +
Sbjct: 269 LTSWKKNALSLAGRAILIRATLTAIPNYWMTASWIPDSVV 308


>ref|XP_020096969.1| uncharacterized protein LOC109716078, partial [Ananas comosus]
          Length = 1220

 Score = 51.6 bits (122), Expect(2) = 5e-07
 Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
 Frame = +1

Query: 265  KYTENLNKYSCQS---TNGIHMLNWNTIISHANFGSLSMKDFTLFRIAIQYKCILDLLNH 435
            K T+ + K+  +      G+H++ W+ I      G L+ ++    R A   +  L LLN+
Sbjct: 837  KITQIIRKFLWEKHGGKKGMHLIAWDNITKPLTEGGLNFRNLRKSREAFMARNALKLLNN 896

Query: 436  KPTIWISLVMAKYGIPNPR*ITWFRHMSWSWRGFT-RFEFLESGTPELC*EWQDTSILNH 612
                W+ ++  KYG  +P         SW+WR      + ++ G      +  +T+ L H
Sbjct: 897  INLPWVRIMKGKYGELDPWKNPKLTTTSWAWRALNYTVQAIKLGLQISISDGLNTNFLEH 956

Query: 613  A*CLDLPIYCKPTFISTD 666
                  P   KPTFI+T+
Sbjct: 957  PWLFTTPFSKKPTFIATN 974



 Score = 34.3 bits (77), Expect(2) = 5e-07
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +2

Query: 155 LGSWWGNFISQASRAALVNSTIITSPIHALISTWLPESTL 274
           L SW  N +S A RA L+ +T+   P + + ++W+P+S +
Sbjct: 796 LTSWKKNALSLAGRAILIRATLTAIPNYWMTASWIPDSVV 835