BLASTX nr result

ID: Cheilocostus21_contig00035686 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00035686
         (406 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONM60405.1| F-box protein SKIP5 [Zea mays] >gi|1142861922|gb|...    54   3e-06
ref|XP_009387040.1| PREDICTED: F-box protein SKIP5 [Musa acumina...    55   5e-06
gb|PIA48187.1| hypothetical protein AQUCO_01400632v1 [Aquilegia ...    54   6e-06
gb|PIA48186.1| hypothetical protein AQUCO_01400632v1, partial [A...    54   8e-06

>gb|ONM60405.1| F-box protein SKIP5 [Zea mays]
 gb|ONM60406.1| F-box protein SKIP5 [Zea mays]
          Length = 135

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -1

Query: 406 PGDTILIAPGGDHIACNIQINKPLCLVS 323
           PGDTILIA GG H+ACNIQI KP+C+VS
Sbjct: 89  PGDTILIAAGGSHVACNIQIKKPICIVS 116


>ref|XP_009387040.1| PREDICTED: F-box protein SKIP5 [Musa acuminata subsp. malaccensis]
          Length = 279

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 406 PGDTILIAPGGDHIACNIQINKPLCLV 326
           PGDTILIAPG DH+ACNIQI KPLCL+
Sbjct: 119 PGDTILIAPGLDHVACNIQIKKPLCLI 145


>gb|PIA48187.1| hypothetical protein AQUCO_01400632v1 [Aquilegia coerulea]
          Length = 217

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 406 PGDTILIAPGGDHIACNIQINKPLCLV 326
           PGDTILIA GG+HIACNIQI KPLCL+
Sbjct: 56  PGDTILIAAGGNHIACNIQIKKPLCLI 82


>gb|PIA48186.1| hypothetical protein AQUCO_01400632v1, partial [Aquilegia coerulea]
          Length = 266

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 406 PGDTILIAPGGDHIACNIQINKPLCLV 326
           PGDTILIA GG+HIACNIQI KPLCL+
Sbjct: 105 PGDTILIAAGGNHIACNIQIKKPLCLI 131


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