BLASTX nr result
ID: Cheilocostus21_contig00035644
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00035644
(598 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP02690.1| unnamed protein product [Coffea canephora] 66 2e-09
ref|XP_009790414.1| PREDICTED: serine hydroxymethyltransferase, ... 65 2e-09
gb|AFR41476.1| serine hydroxymethyltransferase, partial [Populus... 61 3e-09
gb|AFR41477.1| serine hydroxymethyltransferase, partial [Populus... 61 4e-09
gb|AFR41475.1| serine hydroxymethyltransferase, partial [Populus... 61 4e-09
gb|AFR41462.1| serine hydroxymethyltransferase, partial [Populus... 61 4e-09
gb|AGW24497.1| serine hydroxymethyltransferase, mitochondrial, p... 61 6e-09
ref|XP_008357582.1| PREDICTED: serine hydroxymethyltransferase 1... 61 9e-09
ref|XP_016443054.1| PREDICTED: serine hydroxymethyltransferase, ... 65 1e-08
ref|XP_016446525.1| PREDICTED: serine hydroxymethyltransferase, ... 61 2e-08
ref|XP_008384294.1| PREDICTED: serine hydroxymethyltransferase, ... 62 2e-08
dbj|GAV79137.1| SHMT domain-containing protein [Cephalotus folli... 61 4e-08
gb|ACJ85724.1| unknown [Medicago truncatula] 61 4e-08
dbj|GAU45212.1| hypothetical protein TSUD_244170 [Trifolium subt... 60 4e-08
gb|PHU25295.1| Serine hydroxymethyltransferase, mitochondrial [C... 62 5e-08
ref|XP_018837045.1| PREDICTED: serine hydroxymethyltransferase 1... 62 8e-08
ref|XP_018837047.1| PREDICTED: serine hydroxymethyltransferase 1... 62 9e-08
ref|XP_021857255.1| serine hydroxymethyltransferase, mitochondri... 62 9e-08
ref|XP_009345858.1| PREDICTED: serine hydroxymethyltransferase, ... 62 9e-08
ref|XP_009364793.1| PREDICTED: serine hydroxymethyltransferase, ... 62 9e-08
>emb|CDP02690.1| unnamed protein product [Coffea canephora]
Length = 238
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/46 (73%), Positives = 35/46 (76%), Gaps = 4/46 (8%)
Frame = +1
Query: 217 LSTTATYDKEKSGVTWMKQQN----VVDPEITDIIELEKARQWKVL 342
L A YDKEKSGVTW KQ N VVDPE+TDIIELEKARQWK L
Sbjct: 33 LPNEAVYDKEKSGVTWPKQLNAPLHVVDPEVTDIIELEKARQWKGL 78
Score = 61.2 bits (147), Expect = 7e-08
Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 75 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 106
>ref|XP_009790414.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Nicotiana sylvestris]
Length = 197
Score = 64.7 bits (156), Expect = 2e-09
Identities = 46/131 (35%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Frame = +1
Query: 217 LSTTATYDKEKSGVTWMKQQN----VVDPEITDIIELEKARQWKVLYWAIDPFLGVVDSD 384
L A YDKEKSGVTW KQ N VVDPEI DIIELEKARQWK L
Sbjct: 33 LPNEAVYDKEKSGVTWPKQLNAPLEVVDPEIADIIELEKARQWKGL-------------- 78
Query: 385 PFRC*IYLAS*ICKISSHVDSVSVTDLCILRLIGRDLSSYHQRISRRQSCKL*DLS*LTN 564
+ S + T L +++ +G +++ +
Sbjct: 79 ----------------ELIPSENFTSLSVMQAVGSVMTNKY------------------- 103
Query: 565 TARGYPGARYY 597
+ GYPGARYY
Sbjct: 104 -SEGYPGARYY 113
>gb|AFR41476.1| serine hydroxymethyltransferase, partial [Populus alba]
Length = 69
Score = 61.2 bits (147), Expect = 3e-09
Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 28 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 59
>gb|AFR41477.1| serine hydroxymethyltransferase, partial [Populus alba]
gb|AFR41478.1| serine hydroxymethyltransferase, partial [Populus alba]
gb|AFR41479.1| serine hydroxymethyltransferase, partial [Populus fremontii]
gb|AFR41480.1| serine hydroxymethyltransferase, partial [Populus fremontii]
gb|AFR41481.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41482.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41483.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41484.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41485.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41486.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41487.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41488.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41489.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41490.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41491.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41492.1| serine hydroxymethyltransferase, partial [Populus nigra]
gb|AFR41493.1| serine hydroxymethyltransferase, partial [Populus nigra]
Length = 86
Score = 61.2 bits (147), Expect = 4e-09
Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 45 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 76
>gb|AFR41475.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
Length = 86
Score = 61.2 bits (147), Expect = 4e-09
Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 45 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 76
>gb|AFR41462.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41463.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41464.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41465.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41466.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41467.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41468.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41469.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41470.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41471.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41472.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41473.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
gb|AFR41474.1| serine hydroxymethyltransferase, partial [Populus trichocarpa]
Length = 86
Score = 61.2 bits (147), Expect = 4e-09
Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 45 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 76
>gb|AGW24497.1| serine hydroxymethyltransferase, mitochondrial, partial [Avicennia
marina subsp. marina]
Length = 98
Score = 61.2 bits (147), Expect = 6e-09
Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 55 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 86
>ref|XP_008357582.1| PREDICTED: serine hydroxymethyltransferase 1, mitochondrial-like
[Malus domestica]
Length = 115
Score = 61.2 bits (147), Expect = 9e-09
Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 73 WKGLELIPSENFTSLSVMQAVGSVMTNKYSEG 104
Score = 58.2 bits (139), Expect = 1e-07
Identities = 42/131 (32%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Frame = +1
Query: 217 LSTTATYDKEKSGVTWMKQQN----VVDPEITDIIELEKARQWKVLYWAIDPFLGVVDSD 384
L++ A DKEK+ TW+KQ N VVDPEI DIIELEKARQWK L
Sbjct: 31 LASQAAQDKEKARATWIKQLNEPLEVVDPEIADIIELEKARQWKGL-------------- 76
Query: 385 PFRC*IYLAS*ICKISSHVDSVSVTDLCILRLIGRDLSSYHQRISRRQSCKL*DLS*LTN 564
+ S + T L +++ +G +++ +
Sbjct: 77 ----------------ELIPSENFTSLSVMQAVGSVMTNKY------------------- 101
Query: 565 TARGYPGARYY 597
+ GYPGARYY
Sbjct: 102 -SEGYPGARYY 111
>ref|XP_016443054.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Nicotiana tabacum]
Length = 559
Score = 64.7 bits (156), Expect = 1e-08
Identities = 46/131 (35%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Frame = +1
Query: 217 LSTTATYDKEKSGVTWMKQQN----VVDPEITDIIELEKARQWKVLYWAIDPFLGVVDSD 384
L A YDKEKSGVTW KQ N VVDPEI DIIELEKARQWK L
Sbjct: 74 LPNEAVYDKEKSGVTWPKQLNAPLEVVDPEIADIIELEKARQWKGL-------------- 119
Query: 385 PFRC*IYLAS*ICKISSHVDSVSVTDLCILRLIGRDLSSYHQRISRRQSCKL*DLS*LTN 564
+ S + T L +++ +G +++ +
Sbjct: 120 ----------------ELIPSENFTSLSVMQAVGSVMTNKY------------------- 144
Query: 565 TARGYPGARYY 597
+ GYPGARYY
Sbjct: 145 -SEGYPGARYY 154
>ref|XP_016446525.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Nicotiana tabacum]
Length = 144
Score = 61.2 bits (147), Expect = 2e-08
Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 75 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 106
Score = 60.1 bits (144), Expect = 5e-08
Identities = 31/46 (67%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Frame = +1
Query: 217 LSTTATYDKEKSGVTWMKQQNV----VDPEITDIIELEKARQWKVL 342
L A Y+KEK+GVTW KQ N VDPEI DIIELEKARQWK L
Sbjct: 33 LPNEAVYEKEKNGVTWPKQLNAPLEEVDPEIADIIELEKARQWKGL 78
>ref|XP_008384294.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Malus domestica]
Length = 190
Score = 62.0 bits (149), Expect = 2e-08
Identities = 32/35 (91%), Positives = 32/35 (91%), Gaps = 1/35 (2%)
Frame = +3
Query: 474 TVDWKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
T WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 70 TRQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 104
>dbj|GAV79137.1| SHMT domain-containing protein [Cephalotus follicularis]
Length = 175
Score = 60.8 bits (146), Expect = 4e-08
Identities = 30/32 (93%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS SVMQA+GSVMTNKYSEG
Sbjct: 17 WKGLELIPSENFTSVSVMQAIGSVMTNKYSEG 48
>gb|ACJ85724.1| unknown [Medicago truncatula]
Length = 177
Score = 60.8 bits (146), Expect = 4e-08
Identities = 30/32 (93%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS SVMQAVGS+MTNKYSEG
Sbjct: 75 WKGLELIPSENFTSLSVMQAVGSIMTNKYSEG 106
Score = 55.1 bits (131), Expect = 6e-06
Identities = 41/131 (31%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Frame = +1
Query: 217 LSTTATYDKEKSGVTWMKQQNV----VDPEITDIIELEKARQWKVLYWAIDPFLGVVDSD 384
L A YDKE S V+W KQ N +DPEI DIIELEKARQWK L
Sbjct: 33 LPDEAVYDKENSRVSWPKQLNSSLEEIDPEIADIIELEKARQWKGL-------------- 78
Query: 385 PFRC*IYLAS*ICKISSHVDSVSVTDLCILRLIGRDLSSYHQRISRRQSCKL*DLS*LTN 564
+ S + T L +++ +G +++ +
Sbjct: 79 ----------------ELIPSENFTSLSVMQAVGSIMTNKY------------------- 103
Query: 565 TARGYPGARYY 597
+ GYPGARYY
Sbjct: 104 -SEGYPGARYY 113
>dbj|GAU45212.1| hypothetical protein TSUD_244170 [Trifolium subterraneum]
Length = 142
Score = 60.1 bits (144), Expect = 4e-08
Identities = 30/32 (93%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 483 WKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
WKGLELIPSENFTS +VMQAVGSVMTNKYSEG
Sbjct: 73 WKGLELIPSENFTSLAVMQAVGSVMTNKYSEG 104
>gb|PHU25295.1| Serine hydroxymethyltransferase, mitochondrial [Capsicum chinense]
Length = 316
Score = 62.4 bits (150), Expect = 5e-08
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 483 WKGLELIPSENFTSSVMQAVGSVMTNKYSEG 575
WKGLELIPSENF+ SVMQAVGSVMTNKYSEG
Sbjct: 39 WKGLELIPSENFSMSVMQAVGSVMTNKYSEG 69
>ref|XP_018837045.1| PREDICTED: serine hydroxymethyltransferase 1, mitochondrial
[Juglans regia]
Length = 415
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/35 (91%), Positives = 32/35 (91%), Gaps = 1/35 (2%)
Frame = +3
Query: 474 TVDWKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
T WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 72 TRQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 106
>ref|XP_018837047.1| PREDICTED: serine hydroxymethyltransferase 1, mitochondrial-like
[Juglans regia]
Length = 501
Score = 62.0 bits (149), Expect = 9e-08
Identities = 32/35 (91%), Positives = 32/35 (91%), Gaps = 1/35 (2%)
Frame = +3
Query: 474 TVDWKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
T WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 72 TRQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 106
>ref|XP_021857255.1| serine hydroxymethyltransferase, mitochondrial [Spinacia oleracea]
gb|KNA24003.1| hypothetical protein SOVF_019040 [Spinacia oleracea]
Length = 515
Score = 62.0 bits (149), Expect = 9e-08
Identities = 32/35 (91%), Positives = 32/35 (91%), Gaps = 1/35 (2%)
Frame = +3
Query: 474 TVDWKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
T WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 70 TRQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEG 104
>ref|XP_009345858.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Pyrus x
bretschneideri]
Length = 515
Score = 62.0 bits (149), Expect = 9e-08
Identities = 32/35 (91%), Positives = 32/35 (91%), Gaps = 1/35 (2%)
Frame = +3
Query: 474 TVDWKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
T WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 70 TRQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 104
>ref|XP_009364793.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Pyrus x
bretschneideri]
ref|XP_009371347.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Pyrus x
bretschneideri]
Length = 515
Score = 62.0 bits (149), Expect = 9e-08
Identities = 32/35 (91%), Positives = 32/35 (91%), Gaps = 1/35 (2%)
Frame = +3
Query: 474 TVDWKGLELIPSENFTS-SVMQAVGSVMTNKYSEG 575
T WKGLELIPSENFTS SVMQAVGSVMTNKYSEG
Sbjct: 70 TRQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEG 104