BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00035609
         (2479 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95227.1| retrotransposon protein, putative, unclassified [...    51   3e-09
dbj|BAC15618.2| unnamed protein product [Oryza sativa Japonica G...    51   4e-09
gb|ABA91325.1| retrotransposon protein, putative, unclassified [...    51   4e-09
gb|ABF95298.1| retrotransposon protein, putative, unclassified [...    44   3e-07

>gb|ABA95227.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2776

 Score = 50.8 bits (120), Expect(2) = 3e-09
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = +3

Query: 1341 WINSTLQSSKSFVHQNGYQGK*FY*KRDHK*SNPLSPYLFILVADVFSKSL 1493
            WI S LQ+SKS V  NG  GK    K+  +  +PLSPYLFILVADV  + L
Sbjct: 2117 WIKSLLQTSKSAVLLNGIPGKWINCKKGLRQGDPLSPYLFILVADVLQRLL 2167



 Score = 41.6 bits (96), Expect(2) = 3e-09
 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
 Frame = +2

Query: 1571 EDFTLFSEASIEEFNNLKSLLSPLNCARDFVSTSKTLVSVISLVIQSKILASVLACKAAK 1750
            ED  L   +++ +F+    L   +N A+       T++S+     +   L+ +L CK   
Sbjct: 2200 EDDVLALRSTLLQFSKATGL--QINFAKS------TMISLHIDRSKESSLSELLQCKLES 2251

Query: 1751 FPLQ*LNLSLQIEKLVKAYWYLILIKMDA*LHH*KQNFSPGVED*CHQRIILLDQIL--- 1921
             P+  L L L + KL       I++K+D+ L   + +     E     R+IL++ +L   
Sbjct: 2252 LPMSYLGLPLSLHKLTNNDLQPIVVKVDSFLTGWEASLLSQAE-----RLILVNAVLSSV 2306

Query: 1922 -VHFSSAKMC---CIKASDKRRRILLFHNGDKQCSCLKCYVS 2035
             V+  SA       I+A DKRRR   F  GD  CS  KC V+
Sbjct: 2307 PVYAMSAFKLPPKVIEAIDKRRR-AFFWTGDDTCSGAKCLVA 2347


>dbj|BAC15618.2| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1197

 Score = 50.8 bits (120), Expect(2) = 4e-09
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = +3

Query: 1341 WINSTLQSSKSFVHQNGYQGK*FY*KRDHK*SNPLSPYLFILVADVFSKSL 1493
            WI S LQ+SKS V  NG  GK    K+  +  +PLSPYLFILVADV  + L
Sbjct: 615  WIKSLLQTSKSAVLLNGIPGKWINCKKGLRQGDPLSPYLFILVADVLQRLL 665



 Score = 41.6 bits (96), Expect(2) = 4e-09
 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
 Frame = +2

Query: 1571 EDFTLFSEASIEEFNNLKSLLSPLNCARDFVSTSKTLVSVISLVIQSKILASVLACKAAK 1750
            ED  L   +++ +F+    L   +N A+       T++S+     +   L+ +L CK   
Sbjct: 698  EDDVLALRSTLLQFSKATGL--QINFAKS------TMISLHIDRSKESSLSELLQCKLES 749

Query: 1751 FPLQ*LNLSLQIEKLVKAYWYLILIKMDA*LHH*KQNFSPGVED*CHQRIILLDQIL--- 1921
             P+  L L L + KL       I++K+D+ L   + +     E     R+IL++ +L   
Sbjct: 750  LPMSYLGLPLSLHKLTNNDLQPIVVKVDSFLTGWEASLLSQAE-----RLILVNAVLSSV 804

Query: 1922 -VHFSSAKMC---CIKASDKRRRILLFHNGDKQCSCLKCYVS 2035
             V+  SA       I+A DKRRR   F  GD  CS  KC V+
Sbjct: 805  PVYAMSAFKLPPKVIEAIDKRRR-AFFWTGDDTCSGAKCLVA 845


>gb|ABA91325.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 658

 Score = 50.8 bits (120), Expect(2) = 4e-09
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = +3

Query: 1341 WINSTLQSSKSFVHQNGYQGK*FY*KRDHK*SNPLSPYLFILVADVFSKSL 1493
            WI S LQ+SKS V  NG  GK    K+  +  +PLSPYLFILVADV  + L
Sbjct: 126  WIKSLLQTSKSAVLLNGIPGKWINCKKGLRQGDPLSPYLFILVADVLQRLL 176



 Score = 41.6 bits (96), Expect(2) = 4e-09
 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
 Frame = +2

Query: 1571 EDFTLFSEASIEEFNNLKSLLSPLNCARDFVSTSKTLVSVISLVIQSKILASVLACKAAK 1750
            ED  L   +++ +F+    L   +N A+       T++S+     +   L+ +L CK   
Sbjct: 209  EDDVLALRSTLLQFSKATGL--QINFAKS------TMISLHIDRSKESSLSELLQCKLES 260

Query: 1751 FPLQ*LNLSLQIEKLVKAYWYLILIKMDA*LHH*KQNFSPGVED*CHQRIILLDQIL--- 1921
             P+  L L L + KL       I++K+D+ L   + +     E     R+IL++ +L   
Sbjct: 261  LPMSYLGLPLSLHKLTNNDLQPIVVKVDSFLTGWEASLLSQAE-----RLILVNAVLSSV 315

Query: 1922 -VHFSSAKMC---CIKASDKRRRILLFHNGDKQCSCLKCYVS 2035
             V+  SA       I+A DKRRR   F  GD  CS  KC V+
Sbjct: 316  PVYAMSAFKLPPKVIEAIDKRRR-AFFWTGDDTCSGAKCLVA 356


>gb|ABF95298.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 835

 Score = 43.9 bits (102), Expect(2) = 3e-07
 Identities = 23/51 (45%), Positives = 31/51 (60%)
 Frame = +3

Query: 1341 WINSTLQSSKSFVHQNGYQGK*FY*KRDHK*SNPLSPYLFILVADVFSKSL 1493
            WI + L+SSKS V  NG  G+     +  +  +PLSPYLFILVAD   + +
Sbjct: 323  WIQALLESSKSAVLLNGIPGRWINCSQGLRQGDPLSPYLFILVADTLQQMI 373



 Score = 42.0 bits (97), Expect(2) = 3e-07
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
 Frame = +2

Query: 1571 EDFTLFSEASIEEFNNLKSLLSPLNCARDFVS--TSKTLVSVISLVIQSKILASVLACKA 1744
            +D  +  +A   +   LK++L+    A       T  T+V++ +    S+ LA +L CK 
Sbjct: 396  DDTLIICQAEASQLRALKAILNSFAQATGLKINFTKSTMVTLHTSPEHSQELAGILQCKL 455

Query: 1745 AKFPLQ*LNLSLQIEKLVKAYWYLILIKMDA*LHH*KQ---NFSPGVED*CHQRIILLDQ 1915
              FP   L L L   KL  A +  ++ K+D  L   +    N++         R IL++ 
Sbjct: 456  ETFPQTYLGLPLSATKLPLAAFQPLIAKVDKYLAGWQAPLLNYA--------GRTILVNS 507

Query: 1916 ILVHFSSAKMCC-------IKASDKRRRILLFHNGDKQCSCLKCYVS 2035
            +L    +  M         ++A DKRRR  L+  G++ C   KC ++
Sbjct: 508  VLDSLPTYAMAALLIPKGTLEAMDKRRRAFLW-TGEESCHGSKCLIA 553