BLASTX nr result
ID: Cheilocostus21_contig00035592
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00035592
(2979 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo... 80 2e-11
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 80 2e-11
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 80 3e-11
gb|KYP31293.1| Retrovirus-related Pol polyprotein from transposo... 76 2e-10
gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis] 76 4e-10
gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposo... 74 7e-10
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 75 8e-10
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 74 2e-09
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo... 73 2e-09
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 72 4e-09
gb|KYP47564.1| Retrovirus-related Pol polyprotein from transposo... 65 6e-09
emb|CAJ86192.1| H0306F03.15 [Oryza sativa] 72 8e-09
emb|CAJ86151.1| H0413E07.4 [Oryza sativa] 72 9e-09
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 71 1e-08
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 71 1e-08
gb|OMO83367.1| Integrase, catalytic core [Corchorus capsularis] 71 1e-08
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 71 1e-08
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa] 71 1e-08
gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposo... 67 2e-08
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 70 3e-08
>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
baccatum]
Length = 1526
Score = 80.1 bits (196), Expect = 2e-11
Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACY---------RDCKTSERV 1307
TPQ N V + MNRT+LEKV CM S L K+FW EA +CY DCK E V
Sbjct: 233 TPQQNGVAKRMNRTILEKVRCMLSHSTLGKEFWAEAASTSCYLINRSPNRSLDCKILEEV 292
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG 1382
+ +DY R+FGCP Y+HVN+G
Sbjct: 293 WSGNPIDYSNFRIFGCPAYSHVNEG 317
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 80.1 bits (196), Expect = 2e-11
Identities = 43/85 (50%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MNRT+LE+ CM S+ GL ++FW EA ACY + KT E V
Sbjct: 1096 TPQQNGVAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEV 1155
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG 1382
DY LRVFGCP YAHVN+G
Sbjct: 1156 WSGSPADYSGLRVFGCPAYAHVNEG 1180
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 80.1 bits (196), Expect = 3e-11
Identities = 43/85 (50%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MNRT+LE+ CM S+ GL ++FW EA ACY + KT E V
Sbjct: 1075 TPQQNGVAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEV 1134
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG 1382
DY LRVFGCP YAHVN+G
Sbjct: 1135 WSGSPADYSGLRVFGCPAYAHVNEG 1159
>gb|KYP31293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 569
Score = 76.3 bits (186), Expect = 2e-10
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MNRT+LE+ C+ S+ GL++ FW EA CY DCKTS V
Sbjct: 428 TPQQNGVAERMNRTLLERARCLLSNAGLSRSFWAEAVSTTCYLINRSPSTIIDCKTSIEV 487
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG 1382
+ +Y LRVFGC Y HVN+G
Sbjct: 488 WSNKPANYSLLRVFGCNAYYHVNEG 512
>gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1212
Score = 75.9 bits (185), Expect = 4e-10
Identities = 43/94 (45%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MN+T+L++ CM + GL+K FW EA IA Y D KT + V
Sbjct: 503 TPQQNGVAERMNQTVLQRARCMRLNAGLSKKFWAEAVNIAAYLANRSPSTAIDLKTPQEV 562
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
DY LR+FGCP Y HVNDG P I C
Sbjct: 563 WYDKPSDYSALRIFGCPAYVHVNDGKLEPRAIKC 596
>gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 507
Score = 74.3 bits (181), Expect = 7e-10
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MNRT+LE+ C+ S+ GL++ FW EA CY DCKT V
Sbjct: 200 TPQQNGVAERMNRTLLERARCLLSNAGLSRSFWAEAVSTTCYLINRSPSTIIDCKTPIEV 259
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG 1382
+ +Y LRVFGC Y HVN+G
Sbjct: 260 WSNKPANYSLLRVFGCNAYYHVNEG 284
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 75.1 bits (183), Expect = 8e-10
Identities = 44/94 (46%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ NDV E MNRT++ K CM S+ GL K FW EA ACY D KT V
Sbjct: 561 TPQQNDVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIEV 620
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
+Y LRVFGC YAHV++G P I C
Sbjct: 621 WSGSPTNYSDLRVFGCTAYAHVDNGKLEPRAIKC 654
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1032
Score = 73.9 bits (180), Expect = 2e-09
Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Frame = +3
Query: 1158 PQHNDVDE*MNRTMLEKVHCMFSSFGL--TKDFWVEAT*IACYR---------DCKTSER 1304
PQ N V E +NRT+LE+ CM S+ GL ++ WVEA ACY + K E
Sbjct: 279 PQQNGVAERLNRTILERARCMLSNAGLWHQRELWVEAASTACYLINRSPHSSLNFKIPEE 338
Query: 1305 V*LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
+ + +DY LR+FGCP YAHVNDG P I C
Sbjct: 339 IWSGNPIDYSNLRIFGCPAYAHVNDGKLAPRAIKC 373
>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 448
Score = 72.8 bits (177), Expect = 2e-09
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MN+T+LE+ C+ S+ GL++ FW EA CY DCKT V
Sbjct: 341 TPQQNGVAERMNKTLLERARCLLSNAGLSRSFWAEAISTTCYLINRSPSTVIDCKTPIEV 400
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG 1382
+ +Y LRVFGC Y HVN+G
Sbjct: 401 WSNKPANYSLLRVFGCNAYYHVNEG 425
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 690
Score = 72.4 bits (176), Expect = 4e-09
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 11/86 (12%)
Frame = +3
Query: 1158 PQHNDVDE*MNRTMLEKVHCMFSSFGL--TKDFWVEAT*IACYR---------DCKTSER 1304
PQ N V E +NRT+LE+ CM S+ GL ++ WVEA ACY + K E
Sbjct: 575 PQQNGVAERLNRTILERARCMLSNAGLWHQRELWVEAASTACYLINRSPHSSLNFKIPEE 634
Query: 1305 V*LSHLVDYL*LRVFGCPIYAHVNDG 1382
+ + +DY LR+FGCP YAHVNDG
Sbjct: 635 IWSGNPIDYSNLRIFGCPAYAHVNDG 660
>gb|KYP47564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 98
Score = 64.7 bits (156), Expect = 6e-09
Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Frame = +3
Query: 1185 MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV*LSHLVDYL* 1337
MNRT+LEK C+ S+ GLTK FW +A ACY CKT V + +Y
Sbjct: 1 MNRTLLEKARCLLSNAGLTKIFWAKAMNTACYLVNRSPSTTIGCKTPTEVWSTKPANYSI 60
Query: 1338 LRVFGCPIYAHVNDG 1382
LR+FGC Y HVN+G
Sbjct: 61 LRIFGCHAYYHVNEG 75
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
Length = 1037
Score = 71.6 bits (174), Expect = 8e-09
Identities = 42/94 (44%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MNRT++ K CM S+ GL K FW EA ACY D KT +V
Sbjct: 406 TPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKV 465
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
+Y L+VFGC YAHV++G P I C
Sbjct: 466 WSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKC 499
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
Length = 1205
Score = 71.6 bits (174), Expect = 9e-09
Identities = 42/94 (44%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MNRT++ K CM S+ GL K FW EA ACY D KT +V
Sbjct: 574 TPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKV 633
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
+Y L+VFGC YAHV++G P I C
Sbjct: 634 WSGSPANYSDLKVFGCTAYAHVDNGKLEPRTIKC 667
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gb|AAL75759.1| Putative pol polyprotein [Oryza sativa Japonica Group]
gb|AAP51772.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1005
Score = 71.2 bits (173), Expect = 1e-08
Identities = 42/94 (44%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACY---------RDCKTSERV 1307
TPQ N V E MNRT++ K HCM S+ + K FW EA ACY + KT V
Sbjct: 319 TPQQNGVAERMNRTIISKAHCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEV 378
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
DY LRVFGC YAHV++G P I C
Sbjct: 379 WSGMSADYSQLRVFGCTAYAHVDNGKLEPRAIKC 412
>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 71.2 bits (173), Expect = 1e-08
Identities = 42/94 (44%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MNRT++ K C+ S+ GL K FW EA ACY D KT V
Sbjct: 589 TPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEV 648
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
+Y LRVFGC YAHV++G P I C
Sbjct: 649 WSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKC 682
>gb|OMO83367.1| Integrase, catalytic core [Corchorus capsularis]
Length = 785
Score = 70.9 bits (172), Expect = 1e-08
Identities = 40/94 (42%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MN+T+L++ C+ + GL+K FW EA Y D KT + +
Sbjct: 555 TPQQNGVAERMNQTLLQRARCIRLNAGLSKKFWAEAVNTTAYLVNRSPSTAIDLKTPQDL 614
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
DY LR+FGCP YAHVNDG P I C
Sbjct: 615 WYDKPSDYSGLRIFGCPAYAHVNDGKLEPRAIKC 648
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 71.2 bits (173), Expect = 1e-08
Identities = 42/94 (44%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MNRT++ K C+ S+ GL K FW EA ACY D KT V
Sbjct: 796 TPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEV 855
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
+Y LRVFGC YAHV++G P I C
Sbjct: 856 WSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKC 889
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa]
Length = 1009
Score = 70.9 bits (172), Expect = 1e-08
Identities = 43/94 (45%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MNRT++ K CM S+ GL K FW EA ACY D KT V
Sbjct: 410 TPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEV 469
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
S Y LRVF C YAHV++G P I C
Sbjct: 470 WSSSPAKYSDLRVFSCTAYAHVDNGKLEPRAIKC 503
>gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 634
Score = 66.6 bits (161), Expect(2) = 2e-08
Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACY---------RDCKTSERV 1307
TPQ N + E NRT+LE+V CM + GL K FWVEA A Y + KT + V
Sbjct: 235 TPQKNGLAERFNRTILERVRCMLNHAGLPKSFWVEAVSSAVYCINRCPSTALEFKTPQEV 294
Query: 1308 *LSHLVDYL*LRVFGCPIYAHV 1373
VDY LRVFGC YAH+
Sbjct: 295 WSGRKVDYSELRVFGCIAYAHI 316
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 1091 FCDKEFSKF-KDEDIVRYFIVR 1153
FCD++FSKF ++ + R+ VR
Sbjct: 212 FCDEKFSKFCRENGVARHKTVR 233
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 70.1 bits (170), Expect = 3e-08
Identities = 42/94 (44%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Frame = +3
Query: 1155 TPQHNDVDE*MNRTMLEKVHCMFSSFGLTKDFWVEAT*IACYR---------DCKTSERV 1307
TPQ N V E MNRT++ K CM S+ GL K FW EA ACY D KT +V
Sbjct: 550 TPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIKV 609
Query: 1308 *LSHLVDYL*LRVFGCPIYAHVNDG--YPSCISC 1403
+Y LRVFGC YAHV++ P I C
Sbjct: 610 WSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKC 643