BLASTX nr result

ID: Cheilocostus21_contig00035574 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00035574
         (499 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020087303.1| protein SLOW GREEN 1, chloroplastic-like [An...    45   2e-07
ref|XP_008788995.1| PREDICTED: protein SLOW GREEN 1, chloroplast...    42   1e-06
ref|XP_009409535.1| PREDICTED: protein SLOW GREEN 1, chloroplast...    42   5e-06

>ref|XP_020087303.1| protein SLOW GREEN 1, chloroplastic-like [Ananas comosus]
          Length = 339

 Score = 45.1 bits (105), Expect(2) = 2e-07
 Identities = 19/37 (51%), Positives = 30/37 (81%)
 Frame = +1

Query: 310 VQPQHLPSTQDPETISDPDQDRVLEERLAAFPDDVHS 420
           V+P  LPS++D ET++D +++R+L+E LA+ PDDV S
Sbjct: 96  VEPDTLPSSKDSETLTDAEKERLLQENLASNPDDVKS 132



 Score = 37.4 bits (85), Expect(2) = 2e-07
 Identities = 16/27 (59%), Positives = 23/27 (85%)
 Frame = +2

Query: 419 LKVKAGKIDEAIGIVDRMISVEPGDTD 499
           +KVK+ K+ EAIGIVDR+I++EP + D
Sbjct: 139 VKVKSHKLPEAIGIVDRLIALEPDEND 165


>ref|XP_008788995.1| PREDICTED: protein SLOW GREEN 1, chloroplastic-like [Phoenix
           dactylifera]
          Length = 342

 Score = 42.4 bits (98), Expect(2) = 1e-06
 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
 Frame = +1

Query: 292 SRLRREVQPQHLPSTQ---DPETISDPDQDRVLEERLAAFPDDVHS 420
           S L   VQP+ LPS+    DPET+++ +++R LEE L + PDDV S
Sbjct: 89  SPLPAAVQPETLPSSPASADPETLAEAEEERTLEEYLDSHPDDVRS 134



 Score = 37.7 bits (86), Expect(2) = 1e-06
 Identities = 16/27 (59%), Positives = 23/27 (85%)
 Frame = +2

Query: 419 LKVKAGKIDEAIGIVDRMISVEPGDTD 499
           LKVK+ K+ EAI IVDR++++EPG+ D
Sbjct: 141 LKVKSQKLPEAIDIVDRLVALEPGEKD 167


>ref|XP_009409535.1| PREDICTED: protein SLOW GREEN 1, chloroplastic [Musa acuminata
           subsp. malaccensis]
          Length = 346

 Score = 42.4 bits (98), Expect(2) = 5e-06
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +2

Query: 419 LKVKAGKIDEAIGIVDRMISVEPGDTD 499
           LKVKAGK+ EAIGIVDR+I++EP + D
Sbjct: 146 LKVKAGKLAEAIGIVDRLIALEPAEKD 172



 Score = 35.4 bits (80), Expect(2) = 5e-06
 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +1

Query: 310 VQPQHLPSTQDPET--ISDPDQDRVLEERLAAFPDDVHS 420
           VQ   LPS    ET  +++ +++R+LEERL + PDDV S
Sbjct: 101 VQSDALPSDASSETTPLTEAEKERILEERLDSHPDDVRS 139


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