BLASTX nr result

ID: Cheilocostus21_contig00035453 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00035453
         (673 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK76605.1| uncharacterized protein A4U43_C03F30040 [Asparagu...    66   6e-11
ref|XP_009408682.1| PREDICTED: mitochondrial outer membrane prot...    62   6e-08

>gb|ONK76605.1| uncharacterized protein A4U43_C03F30040 [Asparagus officinalis]
          Length = 245

 Score = 65.9 bits (159), Expect(2) = 6e-11
 Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 14/90 (15%)
 Frame = -2

Query: 354 MVITGSRTKNNDLIFGEIQSQIKKNNIRIDVKTTSDSNVKLQYLHD*ALD*LTVLLSISL 175
           + IT S T+ N++IFGEIQSQ+K  N+ +DVK  SDSNV+LQY H+ A     V  SI L
Sbjct: 37  VAITASSTRKNEMIFGEIQSQLKNKNVTVDVKANSDSNVELQYFHEYA----GVNASIGL 92

Query: 174 K--------------TAAVADDVAFHTASG 127
                            AV  DV+F TA+G
Sbjct: 93  TANPVVNLAGVFGSGALAVGADVSFDTATG 122



 Score = 29.6 bits (65), Expect(2) = 6e-11
 Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 41/82 (50%)
 Frame = -3

Query: 125 SGNSTKFNAG*SINNADLIIAALTL------------------------------FAS-- 42
           +GN TK+NAG S+ N+DL +AAL L                              F+S  
Sbjct: 121 TGNFTKYNAGLSLINSDL-VAALNLNNKGDSLSASYYHVVSPLTSTAVGAEMTHSFSSNE 179

Query: 41  ---------ALDPSTTVKARFN 3
                    ALDP TTVKARF+
Sbjct: 180 NTLTFGTQHALDPLTTVKARFD 201


>ref|XP_009408682.1| PREDICTED: mitochondrial outer membrane protein porin 1-like [Musa
           acuminata subsp. malaccensis]
          Length = 275

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 45/116 (38%), Positives = 55/116 (47%), Gaps = 40/116 (34%)
 Frame = -2

Query: 354 MVITGSRTKNNDLIFGEIQSQIKKNNIRIDVKTTSDSN---------------------- 241
           + IT S T+ ND+IFGEIQSQIK NNI  DVKT SDSN                      
Sbjct: 37  VAITASGTRKNDIIFGEIQSQIKNNNITFDVKTNSDSNVTTTVTINELATPGLKTIFSFV 96

Query: 240 --------VKLQYLHD*ALD*LTVLLS----------ISLKTAAVADDVAFHTASG 127
                   V+L YLHD A    ++ L+          +  KT +V  DVAF TA+G
Sbjct: 97  IPDQRSGKVELHYLHDYAGVNASIGLTANPVVNFSGVVGSKTVSVGADVAFDTATG 152


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