BLASTX nr result

ID: Cheilocostus21_contig00035298 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00035298
         (712 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009400756.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...    84   9e-15
ref|XP_010908490.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...    77   2e-12
ref|XP_017700113.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...    69   9e-10
ref|XP_020689676.1| E3 ubiquitin-protein ligase RNF14 isoform X2...    65   2e-08
gb|PKU82693.1| putative E3 ubiquitin-protein ligase ARI9 [Dendro...    65   2e-08
ref|XP_020689675.1| E3 ubiquitin-protein ligase RNF14 isoform X1...    65   2e-08

>ref|XP_009400756.1| PREDICTED: E3 ubiquitin-protein ligase RNF14 [Musa acuminata subsp.
           malaccensis]
          Length = 607

 Score = 83.6 bits (205), Expect = 9e-15
 Identities = 78/240 (32%), Positives = 111/240 (46%), Gaps = 10/240 (4%)
 Frame = -3

Query: 692 VRWVREPLHKTSEALSPISVHTSESTSNPT-DPVQAVGFDLTTAGGQIRHSIRIGYGGGA 516
           VRWV +P  +      P +  ++  TSNPT DPV           G ++ S RI  G   
Sbjct: 6   VRWVPKPRRE-----EPTATSSASETSNPTPDPV-----------GPVQES-RIAVGSDR 48

Query: 515 QIRDRRSAV*SQWSSRCEREFVN--------LRITXXXXXXXXXEIALNDQMQEEELVAV 360
           + +   S   S   +  + +++         LRI+         +I +NDQMQE+E++A+
Sbjct: 49  EHQRDESGDPSAMGATDDLKYLEAAIGRLDELRISGEEPELSEEQIRVNDQMQEDEVLAL 108

Query: 359 EAIYGHHVISFGRKESLINFQVCFTLLVYNGVIFENNFSIFCKYMCCMRFLMGSKCDAPS 180
           EAIYG +V+SF +KE L  FQV     + +           C  +  M     +K  + S
Sbjct: 109 EAIYGDNVLSFDKKEGLRFFQVRMEYDLPD-----------CINVSAMLQSSTTKVKSGS 157

Query: 179 IHLSQR*ICVGKPEWENRK**LPWHSVTFNVRNLPP-LLTCLLAQFYPSRHPPYFTIMVD 3
             L+ R       E+            TFNV+ LPP LLTCLL + YPS  PPYFTI VD
Sbjct: 158 RSLNGRTKSDDSHEF----------LYTFNVQYLPPLLLTCLLPKSYPSHRPPYFTITVD 207


>ref|XP_010908490.1| PREDICTED: E3 ubiquitin-protein ligase RNF14 [Elaeis guineensis]
          Length = 670

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 55/155 (35%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
 Frame = -3

Query: 446 LRITXXXXXXXXXEIALNDQMQEEELVAVEAIYGHHVISFGRKESLINFQVCFTLLVYNG 267
           LRI+         +I  NDQ+QE+E++A+EAIYG +VI+  RK  L +FQ+C    V   
Sbjct: 142 LRISGEEPELSEEQIRTNDQLQEDEVLALEAIYGDNVITLDRKRGLRSFQICIHYDV--- 198

Query: 266 VIFENNFSIFCKYMCCMRFLMG--------SKCDAPSIHLSQR*ICVGKPEWENRK**LP 111
               ++ SI  K     + L          ++CD     L                    
Sbjct: 199 ---PDDISISAKLHSSSKKLKSGVKGRDGRTECDESDEFL-------------------- 235

Query: 110 WHSVTFNVRNLPPL-LTCLLAQFYPSRHPPYFTIM 9
               TF+VR+LPP+ LTCLL + YPS HPPYFTIM
Sbjct: 236 ---YTFSVRHLPPIILTCLLPRSYPSHHPPYFTIM 267


>ref|XP_017700113.1| PREDICTED: E3 ubiquitin-protein ligase RNF14 [Phoenix dactylifera]
          Length = 635

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
 Frame = -3

Query: 404 IALNDQMQEEELVAVEAIYGHHVISFGRKESLINFQVCFTLLVYNGVIFENNFSIFCKYM 225
           I  NDQ+QE+E++A+EAIYG +VI+  RK  L +FQ+     V       ++ S+  K  
Sbjct: 122 IRTNDQLQEDEVLALEAIYGDNVITLDRKRGLRSFQIYICYEV------PDDISVSAK-- 173

Query: 224 CCMRFLMGSKCDAPSIHLSQR*ICVGKPEWENRK**LPWHSV--TFNVRNLPPL-LTCLL 54
                          +H S   +  G    + R     +     TF+VR LPP+ L CLL
Sbjct: 174 ---------------LHSSSEKLKSGVKGQDGRTECDEFDEFLCTFSVRYLPPIILACLL 218

Query: 53  AQFYPSRHPPYFTIM 9
            Q YPS HPPYFT+M
Sbjct: 219 PQSYPSHHPPYFTVM 233


>ref|XP_020689676.1| E3 ubiquitin-protein ligase RNF14 isoform X2 [Dendrobium catenatum]
          Length = 496

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
 Frame = -3

Query: 461 REFVNLRITXXXXXXXXXEIALNDQMQEEELVAVEAIYGHHVISFGRKESLINFQVCFTL 282
           R    LRI          EI+ NDQ QE+E++A++AIYG  V++  RK  L  FQ+   L
Sbjct: 65  RRLEELRIKGEEPQLSEEEISFNDQRQEDEMLALKAIYGDSVVTLDRKGGLRLFQI---L 121

Query: 281 LVYNGVIFENNFSIFCKYMCCMRFLMGSKCDAPSIHLSQR*ICVGKPEWENRK**LPWHS 102
           + Y      ++FS+  K        +   C+A            G  E EN    L    
Sbjct: 122 IHYE---VPDDFSVSAK--------LEGNCEA------------GYGEDENSDSFL---- 154

Query: 101 VTFNVRNLPP-LLTCLLAQFYPSRHPPYFTI 12
            TF V+ LPP +LTCLL   YPS H PYFT+
Sbjct: 155 YTFKVQYLPPVVLTCLLPVSYPSHHAPYFTV 185


>gb|PKU82693.1| putative E3 ubiquitin-protein ligase ARI9 [Dendrobium catenatum]
          Length = 497

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
 Frame = -3

Query: 461 REFVNLRITXXXXXXXXXEIALNDQMQEEELVAVEAIYGHHVISFGRKESLINFQVCFTL 282
           R    LRI          EI+ NDQ QE+E++A++AIYG  V++  RK  L  FQ+   L
Sbjct: 65  RRLEELRIKGEEPQLSEEEISFNDQRQEDEMLALKAIYGDSVVTLDRKGGLRLFQI---L 121

Query: 281 LVYNGVIFENNFSIFCKYMCCMRFLMGSKCDAPSIHLSQR*ICVGKPEWENRK**LPWHS 102
           + Y      ++FS+  K        +   C+A            G  E EN    L    
Sbjct: 122 IHYE---VPDDFSVSAK--------LEGNCEA------------GYGEDENSDSFL---- 154

Query: 101 VTFNVRNLPP-LLTCLLAQFYPSRHPPYFTI 12
            TF V+ LPP +LTCLL   YPS H PYFT+
Sbjct: 155 YTFKVQYLPPVVLTCLLPVSYPSHHAPYFTV 185


>ref|XP_020689675.1| E3 ubiquitin-protein ligase RNF14 isoform X1 [Dendrobium catenatum]
          Length = 585

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
 Frame = -3

Query: 461 REFVNLRITXXXXXXXXXEIALNDQMQEEELVAVEAIYGHHVISFGRKESLINFQVCFTL 282
           R    LRI          EI+ NDQ QE+E++A++AIYG  V++  RK  L  FQ+   L
Sbjct: 65  RRLEELRIKGEEPQLSEEEISFNDQRQEDEMLALKAIYGDSVVTLDRKGGLRLFQI---L 121

Query: 281 LVYNGVIFENNFSIFCKYMCCMRFLMGSKCDAPSIHLSQR*ICVGKPEWENRK**LPWHS 102
           + Y      ++FS+  K        +   C+A            G  E EN    L    
Sbjct: 122 IHYE---VPDDFSVSAK--------LEGNCEA------------GYGEDENSDSFL---- 154

Query: 101 VTFNVRNLPP-LLTCLLAQFYPSRHPPYFTI 12
            TF V+ LPP +LTCLL   YPS H PYFT+
Sbjct: 155 YTFKVQYLPPVVLTCLLPVSYPSHHAPYFTV 185


Top