BLASTX nr result
ID: Cheilocostus21_contig00035247
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00035247
(1760 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009404871.1| PREDICTED: pentatricopeptide repeat-containi... 362 e-121
gb|KMZ64819.1| hypothetical protein ZOSMA_34G00990 [Zostera marina] 169 3e-43
gb|PKU81970.1| Pentatricopeptide repeat-containing protein [Dend... 145 3e-35
ref|XP_020679684.1| putative pentatricopeptide repeat-containing... 145 4e-35
ref|XP_020573708.1| pentatricopeptide repeat-containing protein ... 144 8e-35
gb|PKA62528.1| Pentatricopeptide repeat-containing protein [Apos... 126 7e-28
ref|XP_008811886.1| PREDICTED: pentatricopeptide repeat-containi... 102 2e-21
ref|XP_010919368.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-20
pdb|5I9F|A Chain A, Crystal Structure Of Designed Pentatricopept... 77 2e-20
ref|XP_010105593.2| pentatricopeptide repeat-containing protein ... 84 2e-19
ref|XP_012477925.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-19
gb|EXC05160.1| hypothetical protein L484_003966 [Morus notabilis] 84 2e-19
pdb|5I9H|A Chain A, Crystal Structure Of Designed Pentatricopept... 73 4e-19
pdb|5I9G|C Chain C, Crystal Structure Of Designed Pentatricopept... 74 5e-19
ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selag... 86 6e-19
ref|XP_020865810.1| pentatricopeptide repeat-containing protein ... 77 7e-19
ref|XP_021994343.1| pentatricopeptide repeat-containing protein ... 89 9e-19
ref|XP_020245530.1| pentatricopeptide repeat-containing protein ... 98 9e-19
ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Sela... 77 1e-18
gb|OAY71696.1| Pentatricopeptide repeat-containing protein [Anan... 81 1e-18
>ref|XP_009404871.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like
[Musa acuminata subsp. malaccensis]
Length = 413
Score = 362 bits (928), Expect(2) = e-121
Identities = 200/299 (66%), Positives = 221/299 (73%), Gaps = 5/299 (1%)
Frame = -2
Query: 1756 EPLRLRQYTASPSRADLSWLXXXXXXXXXXXXXXXXXXPFLSNAAVFRAVTTAHATPRQI 1577
E LR TASPSR DL WL FLSNAAV RAV A A PRQI
Sbjct: 5 ELLRRPPPTASPSRTDLPWLPTLSRRNPRSPGEAGKPSHFLSNAAVLRAVKAAGAIPRQI 64
Query: 1576 LAVYSAAARQPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLR 1397
L+VYSAAA QPGFRHDLPTY+ALT ALALRRRFRAVELLLARMPRDGLRPGPALVLPLLR
Sbjct: 65 LSVYSAAAGQPGFRHDLPTYQALTYALALRRRFRAVELLLARMPRDGLRPGPALVLPLLR 124
Query: 1396 AYSCAGCPAHFLLRACPRPLTDRLFSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHY 1217
AYS AG P LLR+CP PL+DRLFS+ I L+ S+DL IA S+LLS A+LGFP+K+RHY
Sbjct: 125 AYSAAGRPPDALLRSCPLPLSDRLFSALIQDLLRSDDLDIAGSLLLSGANLGFPLKSRHY 184
Query: 1216 FSLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICR----ESVDAAFELVEQ 1049
LVRA V SAI+FLDLLA RG +PDV FYGS IRDICR ++VDAAFE+V+Q
Sbjct: 185 SGLVRAHCDRGAVWSAIEFLDLLATRGSVPDVFFYGSLIRDICRAGGSDAVDAAFEVVDQ 244
Query: 1048 MKRCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERK-STAVIADAGTYNVLIAGNP 875
MKR G EPDVVIWNTLVHGC +AGQ RA VVA++ERK S A DAGTYN LI+ P
Sbjct: 245 MKRNGREPDVVIWNTLVHGCAKAGQWGRAEGVVAEMERKGSGAAATDAGTYNALISAIP 303
Score = 106 bits (264), Expect(2) = e-121
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -3
Query: 888 LRAIPDYQMIREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGI 709
+ AIP QM+++GIL F M+E ++PDV+TFSMLIGGLGRAGRV E N +L KMVR GI
Sbjct: 299 ISAIPHRQMVQDGILAFRRMMEKGVSPDVVTFSMLIGGLGRAGRVWECNTLLGKMVRLGI 358
Query: 708 PLDITCYRVLLDVYRINEMVDDTTS 634
P DI CY++LL VYR N M DD ++
Sbjct: 359 PPDIACYKILLGVYRSNAMSDDASA 383
>gb|KMZ64819.1| hypothetical protein ZOSMA_34G00990 [Zostera marina]
Length = 409
Score = 169 bits (429), Expect = 3e-43
Identities = 107/264 (40%), Positives = 159/264 (60%), Gaps = 13/264 (4%)
Frame = -2
Query: 1633 SNAAVFRAVTTA-HATPRQILAVYSAAARQPGFRHDLPTYKALTSALALRR-RFRAVELL 1460
+NA++ +++TT + +P+Q+L +YS A +QPGFRHD PTYK L LA +R +V LL
Sbjct: 59 TNASILKSITTVGNKSPKQLLTIYSLAGKQPGFRHDYPTYKILILILAQKRHNLPSVLLL 118
Query: 1459 LARMPR-DGLRPGPALVLPLLRAY-SCAGCPAHFLLRA--CPRPLTDRLFSSFIHSLVLS 1292
L RM R D + GPAL+LPLL Y S + LL P+ +++FS ++ L+ +
Sbjct: 119 LDRMRRVDFIPIGPALLLPLLDVYVSHSDLSDESLLGKLFLSAPIHEKVFSKLVNLLIST 178
Query: 1291 NDLKIARSVLLSA--ADLGFPVKARHYFSLVRAFYHHRGVKSAIDFLDLLAERGFLPDVI 1118
+ ++IAR++ A + GF +K RHY L+RA+ +S + LD++AERG P+V
Sbjct: 179 DRIRIARTLFSDAIISKFGFDIKVRHYVDLLRAYCDKGEYQSIHEVLDVMAERGSAPNVF 238
Query: 1117 FYGSFIRDICR----ESVDAAFELVEQMKR-CGLEPDVVIWNTLVHGCVRAGQLSRAVQV 953
+G+ I CR +D F LVEQM+R PDVVIWNTL+ GCVR G++ RA V
Sbjct: 239 CFGALIDKACRRDGVNGLDFGFGLVEQMRRKWDRNPDVVIWNTLLTGCVRNGEMERAEGV 298
Query: 952 VADLERKSTAVIADAGTYNVLIAG 881
+ +E + ++ D TYN +I G
Sbjct: 299 LKMMEDNN--IVKDVWTYNTVIVG 320
>gb|PKU81970.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 346
Score = 145 bits (367), Expect = 3e-35
Identities = 101/288 (35%), Positives = 148/288 (51%), Gaps = 8/288 (2%)
Frame = -2
Query: 1726 SPSRADLSWLXXXXXXXXXXXXXXXXXXPFLSNAAVFRAVTTAHATPRQILAVYSAAARQ 1547
S SRA L WL +SNA++ RA+ ++ P+++L++++AA RQ
Sbjct: 9 SSSRARLPWLLPYSPRPKPGGGHQR-----ISNASILRAIANPNSNPKKVLSLFTAAVRQ 63
Query: 1546 PGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCP-- 1373
GFRH+LPTY +L L R RA E+LL R+P GL PG +L+LPL + AG P
Sbjct: 64 RGFRHELPTYVSLLPFLVRHHRIRATEILLRRLPLTGLCPGSSLLLPLASSALTAGIPSD 123
Query: 1372 --AHFLLRACPRPLTDRLFSSFIHSLVLSNDLKIARSVLLSAA--DLGFPVKARHYFSLV 1205
A LL A P + FSS + ++ S+ L +ARS++L A LGFP+K RH+ LV
Sbjct: 124 SAARLLLSASP---SASAFSSLLGFIIRSDHLSLARSLILFAVPDKLGFPLKIRHFAGLV 180
Query: 1204 RAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDIC-RESVDAAFELVEQMKRCGLE 1028
R + V+ A + + + G D + S I +C SVD F L +M G+
Sbjct: 181 RKYCRRGDVEEAEELVAQMGRSGVSADAETWNSLIVTVCDHRSVDGGFRLFLEMVDMGVL 240
Query: 1027 PDVVIWNTLVHGCVRAGQLSRAVQVVADLERKST-AVIADAGTYNVLI 887
PDV+ ++TL+ R G + + A R V+ D G Y +LI
Sbjct: 241 PDVITFSTLMG---RMGMEGKVLGCNALFGRMLVMGVLPDLGFYRILI 285
Score = 74.7 bits (182), Expect = 1e-10
Identities = 39/101 (38%), Positives = 60/101 (59%)
Frame = -3
Query: 894 SSLRAIPDYQMIREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRS 715
S + + D++ + G F MV+M + PDVITFS L+G +G G+V NA+ +M+
Sbjct: 213 SLIVTVCDHRSVDGGFRLFLEMVDMGVLPDVITFSTLMGRMGMEGKVLGCNALFGRMLVM 272
Query: 714 GIPLDITCYRVLLDVYRINEMVDDTTSILEAMRADGFLIHG 592
G+ D+ YR+L+ VY N ++ D +L AM+ DGFL G
Sbjct: 273 GVLPDLGFYRILIGVYCKNRLLSDVVRVLRAMKIDGFLDDG 313
>ref|XP_020679684.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679685.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679686.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679687.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679688.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679689.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679690.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679691.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679692.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679693.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679694.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679696.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679697.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679698.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679699.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679700.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679701.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679702.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679703.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679704.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679705.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
ref|XP_020679706.1| putative pentatricopeptide repeat-containing protein At1g09680
[Dendrobium catenatum]
Length = 353
Score = 145 bits (367), Expect = 4e-35
Identities = 101/288 (35%), Positives = 148/288 (51%), Gaps = 8/288 (2%)
Frame = -2
Query: 1726 SPSRADLSWLXXXXXXXXXXXXXXXXXXPFLSNAAVFRAVTTAHATPRQILAVYSAAARQ 1547
S SRA L WL +SNA++ RA+ ++ P+++L++++AA RQ
Sbjct: 16 SSSRARLPWLLPYSPRPKPGGGHQR-----ISNASILRAIANPNSNPKKVLSLFTAAVRQ 70
Query: 1546 PGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCP-- 1373
GFRH+LPTY +L L R RA E+LL R+P GL PG +L+LPL + AG P
Sbjct: 71 RGFRHELPTYVSLLPFLVRHHRIRATEILLRRLPLTGLCPGSSLLLPLASSALTAGIPSD 130
Query: 1372 --AHFLLRACPRPLTDRLFSSFIHSLVLSNDLKIARSVLLSAA--DLGFPVKARHYFSLV 1205
A LL A P + FSS + ++ S+ L +ARS++L A LGFP+K RH+ LV
Sbjct: 131 SAARLLLSASP---SASAFSSLLGFIIRSDHLSLARSLILFAVPDKLGFPLKIRHFAGLV 187
Query: 1204 RAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDIC-RESVDAAFELVEQMKRCGLE 1028
R + V+ A + + + G D + S I +C SVD F L +M G+
Sbjct: 188 RKYCRRGDVEEAEELVAQMGRSGVSADAETWNSLIVTVCDHRSVDGGFRLFLEMVDMGVL 247
Query: 1027 PDVVIWNTLVHGCVRAGQLSRAVQVVADLERKST-AVIADAGTYNVLI 887
PDV+ ++TL+ R G + + A R V+ D G Y +LI
Sbjct: 248 PDVITFSTLMG---RMGMEGKVLGCNALFGRMLVMGVLPDLGFYRILI 292
Score = 74.7 bits (182), Expect = 1e-10
Identities = 39/101 (38%), Positives = 60/101 (59%)
Frame = -3
Query: 894 SSLRAIPDYQMIREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRS 715
S + + D++ + G F MV+M + PDVITFS L+G +G G+V NA+ +M+
Sbjct: 220 SLIVTVCDHRSVDGGFRLFLEMVDMGVLPDVITFSTLMGRMGMEGKVLGCNALFGRMLVM 279
Query: 714 GIPLDITCYRVLLDVYRINEMVDDTTSILEAMRADGFLIHG 592
G+ D+ YR+L+ VY N ++ D +L AM+ DGFL G
Sbjct: 280 GVLPDLGFYRILIGVYCKNRLLSDVVRVLRAMKIDGFLDDG 320
>ref|XP_020573708.1| pentatricopeptide repeat-containing protein At1g63130,
mitochondrial-like [Phalaenopsis equestris]
Length = 344
Score = 144 bits (364), Expect = 8e-35
Identities = 87/220 (39%), Positives = 127/220 (57%), Gaps = 7/220 (3%)
Frame = -2
Query: 1636 LSNAAVFRAVTTAHATPRQILAVYSAAARQPGFRHDLPTYKALTSALALRRRFRAVELLL 1457
L NA++ RA ++ P+Q+L+++++A RQ GFRH+LPTY +L L R R ELLL
Sbjct: 29 LPNASIIRATADPNSNPKQVLSLFTSAVRQRGFRHELPTYVSLLPYLVHHGRIRETELLL 88
Query: 1456 ARMPRDGLRPGPALVLPLLRAYSCAGCP----AHFLLRACPRPLTDRLFSSFIHSLVLSN 1289
R+P GL PGP+L+ PL + AG P A LL A P + FSS I ++ SN
Sbjct: 89 RRLPVAGLSPGPSLLFPLASSALAAGIPPDSAARLLLSASP---SASAFSSLIGFIIRSN 145
Query: 1288 DLKIARSVLLSAA--DLGFPVKARHYFSLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIF 1115
L +ARS+LL AA +LGF +K RH+ L+R F V+ A + + + RG L DV
Sbjct: 146 HLSLARSLLLFAAPDNLGFRIKNRHFAGLIRRFCRRGYVEEAEELVAEMGRRGVLADVEI 205
Query: 1114 YGSFIRDIC-RESVDAAFELVEQMKRCGLEPDVVIWNTLV 998
+ + +C SVD F++ M G+ PDV+ ++TL+
Sbjct: 206 WNFLLLTVCDNRSVDDGFQVYLAMTEMGVLPDVISFSTLM 245
Score = 71.2 bits (173), Expect = 1e-09
Identities = 37/107 (34%), Positives = 61/107 (57%)
Frame = -3
Query: 888 LRAIPDYQMIREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGI 709
L + D + + +G + M EM + PDVI+FS L+G +G G+V N++ +M+ G+
Sbjct: 210 LLTVCDNRSVDDGFQVYLAMTEMGVLPDVISFSTLMGRMGMEGKVFGCNSLFGRMLVMGV 269
Query: 708 PLDITCYRVLLDVYRINEMVDDTTSILEAMRADGFLIHGEKRVQN*W 568
D+ YR+L+ +Y N ++ D +L AM+ DGFL G +N W
Sbjct: 270 LPDLVFYRLLIRIYCNNCLLGDAVRVLRAMKIDGFLEDGGVGKKNVW 316
>gb|PKA62528.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 387
Score = 126 bits (316), Expect = 7e-28
Identities = 75/220 (34%), Positives = 127/220 (57%), Gaps = 7/220 (3%)
Frame = -2
Query: 1636 LSNAAVFRAVTTAHATPRQILAVYSAAARQPGFRHDLPTYKALTSALALRRRFRAVELLL 1457
+SNA++ RA+ ++P+QIL+++SAA R GFR ++ TY +L L RR RA EL++
Sbjct: 79 VSNASIVRAIKNPDSSPQQILSLFSAAVRNRGFRLNIRTYASLLPFLVFHRRLRAAELIV 138
Query: 1456 ARMPRDGLRPGPALVLPLLRAYSCAGCP----AHFLLRACPRPLTDRLFSSFIHSLVLSN 1289
++P GP+++LP+ + AG P A LL A P +D FSS + ++
Sbjct: 139 RQVPLS----GPSILLPIASSAISAGIPASATARLLLSASP---SDSAFSSLLRHVLQLG 191
Query: 1288 DLKIARSVLLSA--ADLGFPVKARHYFSLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIF 1115
+ +ARS+LL A ADLGF ++ RH+ +VR + V+ A + + + ++G D
Sbjct: 192 QVNLARSLLLFACPADLGFQLRVRHFAGVVREYCRRGMVEEAEELVAKMGQKGVAADCEI 251
Query: 1114 YGSFIRDIC-RESVDAAFELVEQMKRCGLEPDVVIWNTLV 998
Y + + +IC R VD ++ +M+ G+ PDV+ ++TL+
Sbjct: 252 YNTMLTEICDRCCVDDGIGVLREMEEMGISPDVITFSTLM 291
Score = 69.7 bits (169), Expect = 6e-09
Identities = 38/95 (40%), Positives = 53/95 (55%)
Frame = -3
Query: 888 LRAIPDYQMIREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGI 709
L I D + +GI M EM ++PDVITFS L+G +G GR+ NA+ +M+ GI
Sbjct: 256 LTEICDRCCVDDGIGVLREMEEMGISPDVITFSTLMGRIGMEGRILGCNALFGRMLVMGI 315
Query: 708 PLDITCYRVLLDVYRINEMVDDTTSILEAMRADGF 604
D CYR+L VY N ++ D +L M+ D F
Sbjct: 316 SPDWPCYRILFAVYCRNRLLSDALRVLRVMKLDEF 350
>ref|XP_008811886.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Phoenix dactylifera]
Length = 481
Score = 102 bits (253), Expect(2) = 2e-21
Identities = 84/256 (32%), Positives = 122/256 (47%), Gaps = 16/256 (6%)
Frame = -2
Query: 1600 AHATPRQILAVY-SAAARQP-GFRHDLPTYKALTSALALRRRFRAVELLLARMPRD-GLR 1430
A PR+ L ++ SA A P GFRHDLPT+ + + LA F A E LL R+P D G
Sbjct: 25 AEPDPRKALLIFDSATAEYPSGFRHDLPTFSLMATRLAAAGLFPAAESLLERVPSDLGGP 84
Query: 1429 PGPALVLPLLRAYSCAGCP--AHFLLRACPRPL----TDRLFSSFIHSLVLSNDLKIARS 1268
P A L LLRAY A P A L R P + R +++ + LV N L +AR
Sbjct: 85 PSEASFLALLRAYGRAHRPLDALRLFRQAPTRFRLHPSHRSYTALLAVLVAENRLALARG 144
Query: 1267 VLLSAADLGFPVKARHYFSLVRAFYHHR------GVKSAIDFLDLLAERGFLPDVIFYGS 1106
+ + G P Y L++A V +A+ + +RG PD Y +
Sbjct: 145 LYNHMREAGVPPTVASYNVLLKALCSAATSAAAGSVDAALRVFRRMPDRGCPPDSCSYNT 204
Query: 1105 FIRDICR-ESVDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKS 929
I +C+ VD A EL +QM G P VV + L+HG R+ +L A+ + ++ ++
Sbjct: 205 LIDGLCKIGRVDEARELFQQMDSNGCSPTVVTFTALIHGLCRSDRLDEALNMFGEMSQR- 263
Query: 928 TAVIADAGTYNVLIAG 881
V + TY+ L+ G
Sbjct: 264 -GVDPNIITYSSLVDG 278
Score = 31.6 bits (70), Expect(2) = 2e-21
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 810 PDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLLDVYRINEMVDDTTSI 631
P+ IT+S +I GL + GR+RE +L +M G D Y L+ + + +
Sbjct: 302 PNTITYSSIINGLCKEGRLREGLEVLDRMRLQGRKPDAGLYGKLIKGLCASGRFQEAANY 361
Query: 630 LEAMRADG 607
L+ M G
Sbjct: 362 LDEMVLSG 369
>ref|XP_010919368.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Elaeis guineensis]
Length = 484
Score = 101 bits (252), Expect(2) = 1e-20
Identities = 83/259 (32%), Positives = 122/259 (47%), Gaps = 19/259 (7%)
Frame = -2
Query: 1600 AHATPRQILAVY-SAAARQP-GFRHDLPTYKALTSALALRRRFRAVELLLARMPRD-GLR 1430
A PR+ L ++ SA A P GFRHDLPT+ + + LA F A E LL R+P + G
Sbjct: 25 AEPDPRKALLIFDSATAEYPSGFRHDLPTFSLMATRLAAAGLFSAAESLLERVPSEIGRP 84
Query: 1429 PGPALVLPLLRAYSCAGCPAHFLLRACPRPL------TDRLFSSFIHSLVLSNDLKIARS 1268
P A L LLRAY A P L P + R +++ + LV N L +AR
Sbjct: 85 PSEAPFLVLLRAYGRAHRPLDALRLFHQAPTRFHLHPSHRSYTALLAVLVAENRLALARG 144
Query: 1267 VLLSAADLGFPVKARHYFSLVRAFYH---------HRGVKSAIDFLDLLAERGFLPDVIF 1115
+ + G P Y L++A R + +AI +A+RG PD
Sbjct: 145 LYNHMREAGVPPTVASYNVLLKALCSATTSSGSAAARSIDAAIRVFGRMADRGCPPDSCS 204
Query: 1114 YGSFIRDICR-ESVDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLE 938
Y + I +C+ V+ A EL QM G P VV + TL+HG R +L A+++ ++
Sbjct: 205 YNTLIDGLCKIGRVEEARELFRQMDSNGCSPTVVTYTTLIHGLCRTDRLEEALKMFDEMG 264
Query: 937 RKSTAVIADAGTYNVLIAG 881
++ V + TY+ L+ G
Sbjct: 265 QR--GVDPNIITYSSLVDG 281
Score = 28.9 bits (63), Expect(2) = 1e-20
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 810 PDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
P+ IT+S +I GL GR+RE +L +M G D Y L+
Sbjct: 305 PNTITYSSIIHGLCTEGRLREAVEVLDRMRLHGRKPDAGLYGKLI 349
>pdb|5I9F|A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U10 In Complex With Its Target Rna U10
Length = 460
Score = 76.6 bits (187), Expect(2) = 2e-20
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Frame = -2
Query: 1546 PGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPAH 1367
PG R D+ Y + AL+ R+ L A + R G+ P L+ AG
Sbjct: 10 PGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAG-KLD 68
Query: 1366 FLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLV 1205
L+ + + +++ I L + L A + + G Y +L+
Sbjct: 69 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 128
Query: 1204 RAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGLE 1028
+ A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G++
Sbjct: 129 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIK 188
Query: 1027 PDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
PDVV +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 189 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 235
Score = 53.1 bits (126), Expect(2) = 2e-20
Identities = 40/122 (32%), Positives = 57/122 (46%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI D+ Y L+
Sbjct: 244 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 303
Query: 675 DVYRINEMVDDTTSILEAMRADGFLIHGEKRVQN*WCWMKG*ILIVGLCNMVCLDRGGLK 496
D +D+ + E M G I + N LI GLC LD LK
Sbjct: 304 DGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYN--------TLIDGLCKAGKLDE-ALK 352
Query: 495 IF 490
+F
Sbjct: 353 LF 354
Score = 72.4 bits (176), Expect(2) = 7e-19
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 79 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG-KL 137
Query: 1369 HFLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSL 1208
L+ + + +++ I L + L A + + G Y +L
Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 197
Query: 1207 VRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGL 1031
+ + A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G+
Sbjct: 198 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 257
Query: 1030 EPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
+PDVV +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 258 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 305
Score = 71.6 bits (174), Expect(2) = 7e-19
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Frame = -2
Query: 1363 LLRACPRPLTDRL----FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAF 1196
LL P P RL +++ +H+L + + A + G Y +L+
Sbjct: 2 LLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGL 61
Query: 1195 YHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGLEPDV 1019
+ A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G++PDV
Sbjct: 62 CKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDV 121
Query: 1018 VIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
V +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 122 VTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 165
Score = 53.1 bits (126), Expect(2) = 7e-19
Identities = 40/122 (32%), Positives = 57/122 (46%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI D+ Y L+
Sbjct: 174 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 233
Query: 675 DVYRINEMVDDTTSILEAMRADGFLIHGEKRVQN*WCWMKG*ILIVGLCNMVCLDRGGLK 496
D +D+ + E M G I + N LI GLC LD LK
Sbjct: 234 DGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYN--------TLIDGLCKAGKLDE-ALK 282
Query: 495 IF 490
+F
Sbjct: 283 LF 284
Score = 52.4 bits (124), Expect(2) = 7e-19
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI D+ Y L+
Sbjct: 314 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 373
Query: 675 DVYRINEMVDDTTSILEAMRADG 607
D +D+ + E M G
Sbjct: 374 DGLCKAGKLDEALKLFEEMVEKG 396
Score = 70.9 bits (172), Expect(2) = 1e-18
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 13/258 (5%)
Frame = -2
Query: 1615 RAVTTA-HATPR-----QILAVYSAAARQPGFRHDLPTYKALTSALALRRRFRAVELLLA 1454
RA TT HA R + L +++ RQ G + TY L L + L
Sbjct: 17 RAYTTVLHALSRAGRYERALELFAELRRQ-GVAPTVVTYNTLIDGLCKAGKLDEALKLFE 75
Query: 1453 RMPRDGLRPGPALVLPLLRAYSCAGCPAHFLLRACPRPLTDRL------FSSFIHSLVLS 1292
M G++P L+ AG L+ + + +++ I L +
Sbjct: 76 EMVEKGIKPDVVTYNTLIDGLCKAG-KLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 134
Query: 1291 NDLKIARSVLLSAADLGFPVKARHYFSLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIFY 1112
L A + + G Y +L+ + A+ + + E+G PDV+ Y
Sbjct: 135 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 194
Query: 1111 GSFIRDICRES-VDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLER 935
+ I +C+ +D A +L E+M G++PDVV +NTL+ G +AG+L A+++ ++
Sbjct: 195 NTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE 254
Query: 934 KSTAVIADAGTYNVLIAG 881
K + D TYN LI G
Sbjct: 255 K--GIKPDVVTYNTLIDG 270
Score = 53.1 bits (126), Expect(2) = 1e-18
Identities = 40/122 (32%), Positives = 57/122 (46%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI D+ Y L+
Sbjct: 279 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 338
Query: 675 DVYRINEMVDDTTSILEAMRADGFLIHGEKRVQN*WCWMKG*ILIVGLCNMVCLDRGGLK 496
D +D+ + E M G I + N LI GLC LD LK
Sbjct: 339 DGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYN--------TLIDGLCKAGKLDE-ALK 387
Query: 495 IF 490
+F
Sbjct: 388 LF 389
Score = 72.4 bits (176), Expect(2) = 2e-17
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG-KL 172
Query: 1369 HFLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSL 1208
L+ + + +++ I L + L A + + G Y +L
Sbjct: 173 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 232
Query: 1207 VRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGL 1031
+ + A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G+
Sbjct: 233 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 292
Query: 1030 EPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
+PDVV +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 293 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 340
Score = 47.4 bits (111), Expect(2) = 2e-17
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI D YR ++
Sbjct: 349 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVV 408
Query: 675 DVY 667
+ Y
Sbjct: 409 ESY 411
Score = 72.4 bits (176), Expect(2) = 1e-11
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 149 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG-KL 207
Query: 1369 HFLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSL 1208
L+ + + +++ I L + L A + + G Y +L
Sbjct: 208 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 267
Query: 1207 VRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGL 1031
+ + A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G+
Sbjct: 268 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 327
Query: 1030 EPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
+PDVV +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 328 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 375
Score = 28.1 bits (61), Expect(2) = 1e-11
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLD 700
E + F MVE + PD +T+ ++ RA R E L ++ + + D
Sbjct: 384 EALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Score = 65.5 bits (158), Expect = 2e-07
Identities = 63/278 (22%), Positives = 109/278 (39%), Gaps = 22/278 (7%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 184 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG-KL 242
Query: 1369 HFLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSL 1208
L+ + + +++ I L + L A + + G Y +L
Sbjct: 243 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 302
Query: 1207 VRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGL 1031
+ + A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G+
Sbjct: 303 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 362
Query: 1030 EPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLI----------AG 881
+PDVV +NTL+ G +AG+L A+++ ++ K + D TY ++
Sbjct: 363 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDELTYRRVVESYCRAKRFEEA 420
Query: 880 NP*LSNDQRRDLD-----VPCYGGDGDDARRDHILHAH 782
LS DLD + Y D R +H H H
Sbjct: 421 RGFLSEVSETDLDFDKKALEAYIEDAQFGRLEHHHHHH 458
>ref|XP_010105593.2| pentatricopeptide repeat-containing protein At5g46100 [Morus
notabilis]
Length = 499
Score = 84.0 bits (206), Expect(2) = 2e-19
Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 11/263 (4%)
Frame = -2
Query: 1636 LSNAAVFRAVTTAHATPRQILAVYSAAARQP-GFRHDLPTYKALTSALALRRRFRAVELL 1460
++ A V + + + IL SA A GFRHD T+ + S L +FR+ E L
Sbjct: 34 VTTAQVEKLIRAEKDVGKAILIFDSATAEYANGFRHDHSTFSLMISKLVSANQFRSAEAL 93
Query: 1459 LARMPRDGLRPGPALVLPLLRAYSCAGCPAHFL--------LRACPRPLTDRLFSSFIHS 1304
L RM + + + L L R Y P + L+ P T + + + +
Sbjct: 94 LGRMKEEKCKIIEDIFLSLCRGYGRVHRPLDAIRVFQKMEDLQCKP---TSKSYITILSI 150
Query: 1303 LVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYH-HRGVKSAIDFLDLLAERGFLP 1127
LV N LK A ++G P+ L++A V +A+D + R F P
Sbjct: 151 LVEENQLKEAFRFYRYMKEMGIPLILTSLNILLKALCKMSETVDAALDMFREMPSRSFTP 210
Query: 1126 DVIFYGSFIRDICR-ESVDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLSRAVQVV 950
D YG+ I +CR V A EL ++M+ G P VV + +L+HG ++ L AV++
Sbjct: 211 DSYTYGTLINGLCRFGKVGDAKELFKEMETRGCSPTVVTYTSLIHGLCQSNNLDEAVELF 270
Query: 949 ADLERKSTAVIADAGTYNVLIAG 881
++ K + + TY+ L+ G
Sbjct: 271 EEMTSK--GISPNVFTYSSLMDG 291
Score = 42.4 bits (98), Expect(2) = 2e-19
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = -3
Query: 840 FHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLLDVYRI 661
FH+M+ +P+++T+S LI GL + G++RE +L +M G+ D YR ++ +
Sbjct: 305 FHMMISKGHSPNMVTYSTLIHGLCKEGKLRESMEILDRMKLQGLKPDAGLYRKIITGFCD 364
Query: 660 NEMVDDTTSILEAMRADG 607
+ + ++ M +G
Sbjct: 365 VGKFQEAANFIDEMVLEG 382
>ref|XP_012477925.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
isoform X2 [Gossypium raimondii]
Length = 490
Score = 81.3 bits (199), Expect(2) = 2e-19
Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 14/248 (5%)
Frame = -2
Query: 1588 PRQILAVYSAAARQPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVL 1409
P++ L +++ +RQ GF H+ TY + LA ++F+AV+ LL +M + R + L
Sbjct: 72 PQRALQIFNKVSRQKGFTHNSATYGTILHKLAQSKKFQAVDSLLRQMSYETCRFHEGIFL 131
Query: 1408 PLLRAYSC------AGCPAHFLLRACP----RPLTDRLFSSFIHSLVLSNDLKIARSVL- 1262
L++ +S FLL + RP T +F+ + + DL+ A V+
Sbjct: 132 NLMKHFSRFSLHDKVDLARDFLLNSKKSLRLRPNTC-IFNILVKHHCNNGDLESASEVVK 190
Query: 1261 -LSAADLGFPVKARHYFSLVRAFYHHRGVKSAID-FLDLLAERGFLPDVIFYGSFIRDIC 1088
+ + + +P Y +L+ R +K AI+ F +++ + LPD + Y I C
Sbjct: 191 EMKKSKVSYPSLIT-YSTLIGGLCESRRLKEAIELFEEMVGKDQILPDALTYNLLINGFC 249
Query: 1087 RE-SVDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIAD 911
RE VD A +++E MK G P++ ++ L++G + G A Q+ +E KST + D
Sbjct: 250 REGKVDRARKIIEFMKNNGCSPNLFNYSALMNGLCKEGSWEEAKQLF--VEMKSTGLKPD 307
Query: 910 AGTYNVLI 887
Y L+
Sbjct: 308 TIVYTTLM 315
Score = 45.1 bits (105), Expect(2) = 2e-19
Identities = 27/89 (30%), Positives = 43/89 (48%)
Frame = -3
Query: 861 IREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRV 682
I E + M E + DV+T ++L+GGL R R E ML K+ G+ L+ YR+
Sbjct: 324 IDEAMSLLKEMKENKCEADVVTLNVLLGGLCRESRFHEVLQMLEKLPYEGVYLNKASYRI 383
Query: 681 LLDVYRINEMVDDTTSILEAMRADGFLIH 595
+L+ + ++ +L M GF H
Sbjct: 384 VLNALCQKDEMEKAAKLLGLMLDRGFFPH 412
>gb|EXC05160.1| hypothetical protein L484_003966 [Morus notabilis]
Length = 479
Score = 84.0 bits (206), Expect(2) = 2e-19
Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 11/263 (4%)
Frame = -2
Query: 1636 LSNAAVFRAVTTAHATPRQILAVYSAAARQP-GFRHDLPTYKALTSALALRRRFRAVELL 1460
++ A V + + + IL SA A GFRHD T+ + S L +FR+ E L
Sbjct: 14 VTTAQVEKLIRAEKDVGKAILIFDSATAEYANGFRHDHSTFSLMISKLVSANQFRSAEAL 73
Query: 1459 LARMPRDGLRPGPALVLPLLRAYSCAGCPAHFL--------LRACPRPLTDRLFSSFIHS 1304
L RM + + + L L R Y P + L+ P T + + + +
Sbjct: 74 LGRMKEEKCKIIEDIFLSLCRGYGRVHRPLDAIRVFQKMEDLQCKP---TSKSYITILSI 130
Query: 1303 LVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYH-HRGVKSAIDFLDLLAERGFLP 1127
LV N LK A ++G P+ L++A V +A+D + R F P
Sbjct: 131 LVEENQLKEAFRFYRYMKEMGIPLILTSLNILLKALCKMSETVDAALDMFREMPSRSFTP 190
Query: 1126 DVIFYGSFIRDICR-ESVDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLSRAVQVV 950
D YG+ I +CR V A EL ++M+ G P VV + +L+HG ++ L AV++
Sbjct: 191 DSYTYGTLINGLCRFGKVGDAKELFKEMETRGCSPTVVTYTSLIHGLCQSNNLDEAVELF 250
Query: 949 ADLERKSTAVIADAGTYNVLIAG 881
++ K + + TY+ L+ G
Sbjct: 251 EEMTSK--GISPNVFTYSSLMDG 271
Score = 42.4 bits (98), Expect(2) = 2e-19
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = -3
Query: 840 FHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLLDVYRI 661
FH+M+ +P+++T+S LI GL + G++RE +L +M G+ D YR ++ +
Sbjct: 285 FHMMISKGHSPNMVTYSTLIHGLCKEGKLRESMEILDRMKLQGLKPDAGLYRKIITGFCD 344
Query: 660 NEMVDDTTSILEAMRADG 607
+ + ++ M +G
Sbjct: 345 VGKFQEAANFIDEMVLEG 362
>pdb|5I9H|A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
Length = 460
Score = 72.4 bits (176), Expect(2) = 4e-19
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 1/223 (0%)
Frame = -2
Query: 1546 PGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPAH 1367
PG R D+ Y + AL+ R+ L A + R G+ P
Sbjct: 10 PGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAP-------------------- 49
Query: 1366 FLLRACPRPLTDRLFSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYHH 1187
T +++ I L + L A + + G Y +L+
Sbjct: 50 ----------TVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 99
Query: 1186 RGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGLEPDVVIW 1010
+ A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G++PDVV +
Sbjct: 100 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 159
Query: 1009 NTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
NTL+ G +AG+L A+++ ++ K + D TY LI G
Sbjct: 160 NTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYTTLIDG 200
Score = 53.1 bits (126), Expect(2) = 4e-19
Identities = 40/122 (32%), Positives = 57/122 (46%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI D+ Y L+
Sbjct: 209 EALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 268
Query: 675 DVYRINEMVDDTTSILEAMRADGFLIHGEKRVQN*WCWMKG*ILIVGLCNMVCLDRGGLK 496
D +D+ + E M G I + N LI GLC LD LK
Sbjct: 269 DGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYN--------TLIDGLCKAGKLDE-ALK 317
Query: 495 IF 490
+F
Sbjct: 318 LF 319
Score = 72.0 bits (175), Expect(2) = 9e-19
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 79 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG-KL 137
Query: 1369 HFLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSL 1208
L+ + + +++ I L + L A + + G Y +L
Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTL 197
Query: 1207 VRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGL 1031
+ + A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G+
Sbjct: 198 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGI 257
Query: 1030 EPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
+PDVV +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 258 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 305
Score = 71.6 bits (174), Expect(2) = 9e-19
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Frame = -2
Query: 1363 LLRACPRPLTDRL----FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAF 1196
LL P P RL +++ +H+L + + A + G Y +L+
Sbjct: 2 LLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGL 61
Query: 1195 YHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGLEPDV 1019
+ A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G++PDV
Sbjct: 62 CKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDV 121
Query: 1018 VIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
V +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 122 VTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 165
Score = 52.8 bits (125), Expect(2) = 9e-19
Identities = 40/122 (32%), Positives = 57/122 (46%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI D+ Y L+
Sbjct: 174 EALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLI 233
Query: 675 DVYRINEMVDDTTSILEAMRADGFLIHGEKRVQN*WCWMKG*ILIVGLCNMVCLDRGGLK 496
D +D+ + E M G I + N LI GLC LD LK
Sbjct: 234 DGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYN--------TLIDGLCKAGKLDE-ALK 282
Query: 495 IF 490
+F
Sbjct: 283 LF 284
Score = 52.4 bits (124), Expect(2) = 9e-19
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI D+ Y L+
Sbjct: 314 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 373
Query: 675 DVYRINEMVDDTTSILEAMRADG 607
D +D+ + E M G
Sbjct: 374 DGLCKAGKLDEALKLFEEMVEKG 396
Score = 72.8 bits (177), Expect(2) = 2e-17
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG-KL 172
Query: 1369 HFLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSL 1208
L+ + + +++ I L + L A + + G Y +L
Sbjct: 173 DEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTL 232
Query: 1207 VRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGL 1031
+ + A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G+
Sbjct: 233 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 292
Query: 1030 EPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
+PDVV +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 293 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 340
Score = 47.4 bits (111), Expect(2) = 2e-17
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI D YR ++
Sbjct: 349 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVV 408
Query: 675 DVY 667
+ Y
Sbjct: 409 ESY 411
Score = 73.2 bits (178), Expect(2) = 6e-12
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 149 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAG-KL 207
Query: 1369 HFLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSL 1208
L+ + + +++ I L + L A + + G Y +L
Sbjct: 208 DEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 267
Query: 1207 VRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGL 1031
+ + A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G+
Sbjct: 268 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 327
Query: 1030 EPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
+PDVV +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 328 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 375
Score = 28.1 bits (61), Expect(2) = 6e-12
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLD 700
E + F MVE + PD +T+ ++ RA R E L ++ + + D
Sbjct: 384 EALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Score = 65.9 bits (159), Expect = 1e-07
Identities = 63/278 (22%), Positives = 109/278 (39%), Gaps = 22/278 (7%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 184 EKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAG-KL 242
Query: 1369 HFLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSL 1208
L+ + + +++ I L + L A + + G Y +L
Sbjct: 243 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 302
Query: 1207 VRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGL 1031
+ + A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G+
Sbjct: 303 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 362
Query: 1030 EPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLI----------AG 881
+PDVV +NTL+ G +AG+L A+++ ++ K + D TY ++
Sbjct: 363 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDELTYRRVVESYCRAKRFEEA 420
Query: 880 NP*LSNDQRRDLD-----VPCYGGDGDDARRDHILHAH 782
LS DLD + Y D R +H H H
Sbjct: 421 RGFLSEVSETDLDFDKKALEAYIEDAQFGRLEHHHHHH 458
>pdb|5I9G|C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
Length = 460
Score = 74.3 bits (181), Expect(2) = 5e-19
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 7/229 (3%)
Frame = -2
Query: 1546 PGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPAH 1367
PG R D+ Y + AL+ R+ L A + R G+ P L+ AG
Sbjct: 10 PGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAG-KLD 68
Query: 1366 FLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLV 1205
L+ + + +++ I L + L A + + G Y +L+
Sbjct: 69 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 128
Query: 1204 RAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGLE 1028
+ A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G++
Sbjct: 129 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIK 188
Query: 1027 PDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
PDVV +NTL+ G +AG+L A+++ ++ K + TYN LI G
Sbjct: 189 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPSVVTYNTLIDG 235
Score = 50.8 bits (120), Expect(2) = 5e-19
Identities = 39/122 (31%), Positives = 56/122 (45%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + P V+T++ LI GL +AG++ E + +MV GI D+ Y L+
Sbjct: 244 EALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 303
Query: 675 DVYRINEMVDDTTSILEAMRADGFLIHGEKRVQN*WCWMKG*ILIVGLCNMVCLDRGGLK 496
D +D+ + E M G I + N LI GLC LD LK
Sbjct: 304 DGLCKAGKLDEALKLFEEMVEKG--IKPDVVTYN--------TLIDGLCKAGKLDE-ALK 352
Query: 495 IF 490
+F
Sbjct: 353 LF 354
Score = 71.6 bits (174), Expect(2) = 5e-18
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Frame = -2
Query: 1363 LLRACPRPLTDRL----FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAF 1196
LL P P RL +++ +H+L + + A + G Y +L+
Sbjct: 2 LLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGL 61
Query: 1195 YHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGLEPDV 1019
+ A+ + + E+G PDV+ Y + I +C+ +D A +L E+M G++PDV
Sbjct: 62 CKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDV 121
Query: 1018 VIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
V +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 122 VTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 165
Score = 50.1 bits (118), Expect(2) = 5e-18
Identities = 27/83 (32%), Positives = 42/83 (50%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI + Y L+
Sbjct: 174 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLI 233
Query: 675 DVYRINEMVDDTTSILEAMRADG 607
D +D+ + E M G
Sbjct: 234 DGLCKAGKLDEALKLFEEMVEKG 256
Score = 70.5 bits (171), Expect(2) = 7e-17
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 7/230 (3%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG-KL 172
Query: 1369 HFLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSL 1208
L+ + + +++ I L + L A + + G Y +L
Sbjct: 173 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTL 232
Query: 1207 VRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGL 1031
+ + A+ + + E+G P V+ Y + I +C+ +D A +L E+M G+
Sbjct: 233 IDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 292
Query: 1030 EPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
+PDVV +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 293 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 340
Score = 47.4 bits (111), Expect(2) = 7e-17
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLL 676
E + F MVE + PDV+T++ LI GL +AG++ E + +MV GI D YR ++
Sbjct: 349 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVV 408
Query: 675 DVY 667
+ Y
Sbjct: 409 ESY 411
Score = 72.8 bits (177), Expect(2) = 8e-12
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 9/232 (3%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 149 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLD 208
Query: 1369 HFLLR--------ACPRPLTDRLFSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYF 1214
L P +T +++ I L + L A + + G Y
Sbjct: 209 EALKLFEEMVEKGIKPSVVT---YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYN 265
Query: 1213 SLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRC 1037
+L+ + A+ + + E+G PDV+ Y + I +C+ +D A +L E+M
Sbjct: 266 TLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK 325
Query: 1036 GLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
G++PDVV +NTL+ G +AG+L A+++ ++ K + D TYN LI G
Sbjct: 326 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDVVTYNTLIDG 375
Score = 28.1 bits (61), Expect(2) = 8e-12
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -3
Query: 855 EGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLD 700
E + F MVE + PD +T+ ++ RA R E L ++ + + D
Sbjct: 384 EALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Score = 65.9 bits (159), Expect = 1e-07
Identities = 65/280 (23%), Positives = 109/280 (38%), Gaps = 24/280 (8%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPA 1370
+ G + D+ TY L L + L M G++P L+ AG
Sbjct: 184 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLD 243
Query: 1369 HFLLR--------ACPRPLTDRLFSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYF 1214
L P +T +++ I L + L A + + G Y
Sbjct: 244 EALKLFEEMVEKGIKPSVVT---YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYN 300
Query: 1213 SLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRC 1037
+L+ + A+ + + E+G PDV+ Y + I +C+ +D A +L E+M
Sbjct: 301 TLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK 360
Query: 1036 GLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLI---------- 887
G++PDVV +NTL+ G +AG+L A+++ ++ K + D TY ++
Sbjct: 361 GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK--GIKPDELTYRRVVESYCRAKRFE 418
Query: 886 AGNP*LSNDQRRDLD-----VPCYGGDGDDARRDHILHAH 782
LS DLD + Y D R +H H H
Sbjct: 419 EARGFLSEVSETDLDFDKKALEAYIEDAQFGRLEHHHHHH 458
>ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 85.5 bits (210), Expect(2) = 6e-19
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Frame = -2
Query: 1324 FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYHHRGVKSAIDFLDLLA 1145
F + I L + ++ AR +L +LG P Y +LV ++ A FL+ +
Sbjct: 605 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 664
Query: 1144 ERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLS 968
G +PD I YGS + +CR S D A +LV ++K G +PD V +N LV G ++GQ
Sbjct: 665 SSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTE 724
Query: 967 RAVQVVADLERKSTAVIADAGTYNVLIAGNP*LSNDQRRDLDVPCYGGDGDDARRDH 797
+A+ V+ ++ K D TYN LI D C GD ++ARR H
Sbjct: 725 QAITVLEEMVGKGHH--PDVVTYNTLI--------------DSLCKAGDLEEARRLH 765
Score = 39.3 bits (90), Expect(2) = 6e-19
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = -3
Query: 810 PDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPL--DITCYRVLLDVYRINEMVDDTT 637
P+V+T+S+LI GL + GR+ E ++++M+R + +I Y LD M+ +
Sbjct: 778 PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEAC 837
Query: 636 SILEAMRADGFL 601
++ ++R DG L
Sbjct: 838 ELMRSLR-DGSL 848
Score = 54.7 bits (130), Expect(2) = 6e-12
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Frame = -2
Query: 1324 FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYHHRGVKSAIDFLDLLA 1145
+++ ++ L ++ ++ A +++ S D G Y LV AF V A++ L +A
Sbjct: 398 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 457
Query: 1144 ERGFLPDVIFYGSFIRDICR-ESVDAAFELVEQMK-RCGLEPDVVIWNTLVHGCVRAGQL 971
RG P+V+ + S I +C+ + AF++ + M + GL PD + + TL+ G R G+
Sbjct: 458 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRA 517
Query: 970 SRA 962
+A
Sbjct: 518 GQA 520
Score = 46.6 bits (109), Expect(2) = 6e-12
Identities = 22/81 (27%), Positives = 43/81 (53%)
Frame = -3
Query: 861 IREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRV 682
+ + ++ M+E+E+ PD +TF++LI G +AG + +A+ +MV + D+ +
Sbjct: 548 VSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607
Query: 681 LLDVYRINEMVDDTTSILEAM 619
L+D V+ IL+ M
Sbjct: 608 LIDGLCKAGQVEAARDILDLM 628
Score = 55.8 bits (133), Expect(2) = 1e-09
Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 17/234 (7%)
Frame = -2
Query: 1531 DLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPAHFLLRA 1352
D+ T+ AL L + A +L M G+ P L+ C + + A
Sbjct: 601 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL----CKSGRIEEA 656
Query: 1351 C------------PRPLTDRLFSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSL 1208
C P +T + S +++L ++ A ++ G+ Y L
Sbjct: 657 CQFLEEMVSSGCVPDSIT---YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNIL 713
Query: 1207 VRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICR-----ESVDAAFELVEQMK 1043
V + + AI L+ + +G PDV+ Y + I +C+ E+ ++ ++
Sbjct: 714 VDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVS 773
Query: 1042 RCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
RC + P+VV ++ L++G + G++ A +++ ++ RKS V+ + TYN + G
Sbjct: 774 RCCV-PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDG 826
Score = 37.4 bits (85), Expect(2) = 1e-09
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = -3
Query: 822 MEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLLDVYRINEMVDD 643
+ ++PD +TFS LI GL + G+ E + M+ G ++ Y VL++ + ++
Sbjct: 848 LRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMER 907
Query: 642 TTSILEAM 619
+++E+M
Sbjct: 908 AHAMIESM 915
Score = 52.0 bits (123), Expect(2) = 1e-08
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 14/213 (6%)
Frame = -2
Query: 1477 RAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPAHFLLRACP--RPLTDR-------L 1325
RA+E+ M RDG+ P ++ C ++ L L +R
Sbjct: 198 RALEIFRGEMARDGVAPTIVTYNTIINGL----CKSNELGAGMELFEELVERGHHPDVVT 253
Query: 1324 FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYHHRGVKSAIDFLDLLA 1145
+++ I SL + DL+ AR + + Y L+ + A + + +
Sbjct: 254 YNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMT 313
Query: 1144 ERG--FLPDVIFYGSFIRDICRESVDA-AFELVEQMKRCGLE--PDVVIWNTLVHGCVRA 980
+ LP++I Y SF+ +C++S+ A A EL+ ++ L PD V ++TL+ G +
Sbjct: 314 RKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC 373
Query: 979 GQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
GQ+ A V D+ + + + TYN L+ G
Sbjct: 374 GQIDEACSVFDDM--IAGGYVPNVITYNALVNG 404
Score = 37.7 bits (86), Expect(2) = 1e-08
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = -3
Query: 831 MVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLLD 673
MV+ +TPDVIT+S+L+ +A RV E +L M G ++ + ++D
Sbjct: 421 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473
Score = 67.0 bits (162), Expect = 1e-07
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 9/238 (3%)
Frame = -2
Query: 1567 YSAAARQPGFRHDLPTY-KALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRA- 1394
Y AA PGF+H + ++ K L + +A++L +R+P RP LLRA
Sbjct: 98 YDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLP-PRCRPNHFTYSTLLRAT 156
Query: 1393 YSCAGCPAHFL-----LRACPRPLTDRLFSSFIHSLVLSNDLKIARSVLLSA-ADLGFPV 1232
Y G L +R+ R + D ++ + SL + + A + A G
Sbjct: 157 YKAGGDVERTLGFFRRIRSSSRSVAD--YNIVLQSLCRAGETARALEIFRGEMARDGVAP 214
Query: 1231 KARHYFSLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELV 1055
Y +++ + + ++ + L ERG PDV+ Y + I +C+ ++ A L
Sbjct: 215 TIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLH 274
Query: 1054 EQMKRCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
M P+VV ++ L++G + G++ A +++ ++ RKS V+ + TYN + G
Sbjct: 275 GDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDG 332
Score = 48.5 bits (114), Expect(2) = 5e-07
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = -2
Query: 1132 LPDVIFYGSFIRDICRESVDA-AFELVEQMKRCGLE--PDVVIWNTLVHGCVRAGQLSRA 962
LP++I Y SF+ +C++S+ A A EL+ ++ L PD V ++TL+ G + GQ A
Sbjct: 814 LPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA 873
Query: 961 VQVVADLERKSTAVIADAGTYNVLIAG 881
V D+ + + + TYNVL+ G
Sbjct: 874 CNVFDDM--IAGGYVPNVVTYNVLMNG 898
Score = 35.8 bits (81), Expect(2) = 5e-07
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -3
Query: 831 MVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLLD 673
MV+ +TPDVIT+S+L+ +A V E +L M G ++ + ++D
Sbjct: 915 MVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIID 967
>ref|XP_020865810.1| pentatricopeptide repeat-containing protein At1g63130,
mitochondrial-like [Arabidopsis lyrata subsp. lyrata]
Length = 618
Score = 76.6 bits (187), Expect(2) = 7e-19
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 1/221 (0%)
Frame = -2
Query: 1543 GFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGCPAHF 1364
G HDL TY L ++ R + LL +M + G P + LL + C G
Sbjct: 99 GIAHDLYTYNILINSFCRRSQLSLALSLLGKMIKLGYEPDLVTLNSLLNGF-CHG----- 152
Query: 1363 LLRACPRPLTDRLFSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYHHR 1184
N + A +++ ++G+ + +L+ + H
Sbjct: 153 ------------------------NKISDAVALVHQMVEMGYQPDLFTFNTLIHGLFLHN 188
Query: 1183 GVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRE-SVDAAFELVEQMKRCGLEPDVVIWN 1007
A+ +D + +GF PD++ YG+ + +C++ D A L+++M++ +E DVVI+N
Sbjct: 189 KASQAVALVDWMVVKGFQPDLVTYGTVVNGLCKKGDTDLALSLLKKMEKGNIEADVVIYN 248
Query: 1006 TLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIA 884
T++ G + ++ A+ + ++E K T D +YN LI+
Sbjct: 249 TVIDGLCKYKHVNDALDLFNEMENKGTR--PDVYSYNSLIS 287
Score = 48.1 bits (113), Expect(2) = 7e-19
Identities = 19/71 (26%), Positives = 43/71 (60%)
Frame = -3
Query: 831 MVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLLDVYRINEM 652
M+E E+ PD++TF+ LI + G++ E + + ++M++ I D Y L++ + ++++
Sbjct: 305 MIEREINPDIVTFNALIDAFAKEGKLIEADKLYKEMIKRSIDPDAITYNSLINGFCMHDL 364
Query: 651 VDDTTSILEAM 619
+D+ + E M
Sbjct: 365 LDEAKHMFEFM 375
>ref|XP_021994343.1| pentatricopeptide repeat-containing protein At5g46100 [Helianthus
annuus]
gb|OTG08860.1| putative pentatricopeptide repeat (PPR) superfamily protein
[Helianthus annuus]
Length = 477
Score = 89.4 bits (220), Expect(2) = 9e-19
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 9/261 (3%)
Frame = -2
Query: 1636 LSNAAVFRAVTTAHATPRQILAVYSAAARQP-GFRHDLPTYKALTSALALRRRFRAVELL 1460
++ + V + + + ++ SA+A GFRHD TY + S L +F+ E
Sbjct: 15 VTTSLVEQLIKAERNVEKAVIVFDSASAEYANGFRHDHKTYGLIVSKLLSANQFKRAEDF 74
Query: 1459 LARMPRDGLRPGPALVLPLLRAYSCAGCPAHFLLRACPRPL------TDRLFSSFIHSLV 1298
+ RM +D R ++L + RAY P H ++R + T + + + LV
Sbjct: 75 VDRMRQDDCRVTEDILLSICRAYGRVHKP-HDVMRVFQKMKEYECEPTLKSYVTVFSILV 133
Query: 1297 LSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYHHRG-VKSAIDFLDLLAERGFLPDV 1121
N LK+A LGFP L++A + G + SAI + + G PD+
Sbjct: 134 DENQLKVAFKFYRYMRQLGFPPNVPSLNVLIKALCKNSGTIDSAIRIFREMPKHGCTPDM 193
Query: 1120 IFYGSFIRDICR-ESVDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVAD 944
YG+ I +CR + V+ A EL+++M+ G P VV + +L+HG + L A+ +
Sbjct: 194 YTYGTLINGLCRIKKVNEAKELLKEMEINGCSPSVVTYTSLIHGLSESNNLDEAMAFLEQ 253
Query: 943 LERKSTAVIADAGTYNVLIAG 881
+E K V + TY+ +I G
Sbjct: 254 MEAK--RVDPNVYTYSSIING 272
Score = 35.0 bits (79), Expect(2) = 9e-19
Identities = 21/99 (21%), Positives = 44/99 (44%)
Frame = -3
Query: 894 SSLRAIPDYQMIREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRS 715
S + + Y + + VMV P+++T+S L+ GL + +R+ + +M
Sbjct: 268 SIINGLCKYGRSSDAMELLKVMVSKHHKPNMVTYSTLLHGLCKEKNLRDALIIFDRMKLQ 327
Query: 714 GIPLDITCYRVLLDVYRINEMVDDTTSILEAMRADGFLI 598
G+ D Y ++D++ + + L+ M +G I
Sbjct: 328 GLKPDAGLYWKIIDLFCDGRKFQEAANFLDEMVFEGIPI 366
>ref|XP_020245530.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245531.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245533.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245534.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245535.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245536.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245537.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245538.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245539.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245540.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245541.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
ref|XP_020245542.1| pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Asparagus officinalis]
gb|ONK58037.1| uncharacterized protein A4U43_C09F7290 [Asparagus officinalis]
Length = 295
Score = 97.8 bits (242), Expect = 9e-19
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 2/233 (0%)
Frame = -2
Query: 1633 SNAAVFRAVTTAHATPRQILAVYSAAARQPGFRHDLPTYKALTSALALRRRFRAVELLLA 1454
S + + + +T +QIL +S+A+R P F H+ TY+ L LA RR+F +L
Sbjct: 33 SPSKILHTIKDPSSTLKQILTAFSSASRHPNFHHNYETYQTLIPLLARRRQFTVAGAVLN 92
Query: 1453 RMPR-DGLRPGPALVLPLLRAYSCAGCPAHFLLRACPRPLTDRLFSSFIHSLVLSNDLKI 1277
M R DGL PGP +++PL+++Y G + ++R+FS + +LV +L +
Sbjct: 93 VMRRRDGLAPGPTVLIPLVKSYCDDGRYVDAVDVFLKFSSSNRVFSFLLKTLVDDGELDV 152
Query: 1276 ARSVLLSAADLGFPVKARHYFSLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIR 1097
A + AADLGF ++ R+Y + ++ H + I + PDVI + + I
Sbjct: 153 AEVLFRKAADLGFQIQVRYYNAFIKGLCDHLMIDDGIRVFKGMLSSAVSPDVITFSTLIS 212
Query: 1096 DICRES-VDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADL 941
+ +E V + + +M G+ PD + L R +S V ++ L
Sbjct: 213 HLGKEGRVLGSNAMFGKMLMMGVLPDSACYKILFRMYWRNQMVSEGVGILRGL 265
Score = 80.5 bits (197), Expect = 7e-13
Identities = 42/100 (42%), Positives = 59/100 (59%)
Frame = -3
Query: 888 LRAIPDYQMIREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGI 709
++ + D+ MI +GI F M+ ++PDVITFS LI LG+ GRV NAM KM+ G+
Sbjct: 176 IKGLCDHLMIDDGIRVFKGMLSSAVSPDVITFSTLISHLGKEGRVLGSNAMFGKMLMMGV 235
Query: 708 PLDITCYRVLLDVYRINEMVDDTTSILEAMRADGFLIHGE 589
D CY++L +Y N+MV + IL + DG L GE
Sbjct: 236 LPDSACYKILFRMYWRNQMVSEGVGILRGLVMDGLLNEGE 275
>ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 76.6 bits (187), Expect(2) = 1e-18
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 5/217 (2%)
Frame = -2
Query: 1531 DLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLR----AYSCAGCPAHF 1364
D TY L S + L M R GL+ + +LR A C+ HF
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHF 219
Query: 1363 LLRACPRPLTDRLFSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYHHR 1184
+ P +++ I+ L S+ L A +L D GF Y +++ F
Sbjct: 220 REMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 279
Query: 1183 GVKSAIDFLDLLAERGFLPDVIFYGSFIRDICR-ESVDAAFELVEQMKRCGLEPDVVIWN 1007
V++A+ L+ + RG PDV+ Y + I +C+ + VD A ++++M + G +P+V+ +
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339
Query: 1006 TLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYN 896
TLV G R G L AV++V + + +A TYN
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYR--PNAITYN 374
Score = 47.4 bits (111), Expect(2) = 1e-18
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = -3
Query: 834 VMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLLDVYRINE 655
+M++ PD I +S +I G +AG++RE + +L +M+R G D+ C L+D
Sbjct: 395 MMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAA 454
Query: 654 MVDDTTSIL 628
+D +L
Sbjct: 455 AIDSAQELL 463
Score = 72.8 bits (177), Expect(2) = 6e-15
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 9/232 (3%)
Frame = -2
Query: 1549 QPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLRAYSCAGC-- 1376
Q G D Y + S + R LL +M R G RP A + L+ A A
Sbjct: 398 QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAID 457
Query: 1375 PAHFLLRA-----CPRPLTDRLFSSFIHSLVLSNDLKIARSVL-LSAADLGFPVKARHYF 1214
A LLR C + +S IH+L + L A S L + + +P Y
Sbjct: 458 SAQELLRMSIGMDCAPDVV--AYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT-YN 514
Query: 1213 SLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRC 1037
S+V R + A D + G +PDV+ Y I C+++ +D+AF+++E+MK
Sbjct: 515 SVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEA 574
Query: 1036 GLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
PDVV ++ L++G +AG + +A V E + TYN LI G
Sbjct: 575 KCVPDVVTYSALINGLCKAGTVDKAFDVFQ--EMLGCGCAPNLVTYNTLIDG 624
Score = 38.5 bits (88), Expect(2) = 6e-15
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = -3
Query: 834 VMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLLDVYRINE 655
+M + TPD IT++ LI GL A R+ E +LR+M G D Y LL +
Sbjct: 640 IMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTN 699
Query: 654 MVDDTTSILEAMRA 613
++ +L+ M A
Sbjct: 700 NLELVEQLLKEMEA 713
Score = 59.3 bits (142), Expect(2) = 2e-08
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Frame = -2
Query: 1324 FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYHHRGVKSAIDFLDLLA 1145
+++ +H ND++ A VL G P A +Y +++ F ++ A D L+ +
Sbjct: 373 YNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMI 432
Query: 1144 ERGFLPDVIFYGSFIRDICR-ESVDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLS 968
RG PDV + I +C+ ++D+A EL+ PDVV ++ L+H +A +L
Sbjct: 433 RRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLP 492
Query: 967 RAVQVVADLERKSTAVIADAGTYNVLIAG 881
A + D+ K+ D TYN ++ G
Sbjct: 493 EA-ESWLDVMVKNRC-YPDVVTYNSVVDG 519
Score = 30.0 bits (66), Expect(2) = 2e-08
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = -3
Query: 861 IREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRV 682
I + L F M + PDV+T+S++I + + ML +M + D+ Y
Sbjct: 526 INDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585
Query: 681 LLDVYRINEMVDDTTSILEAMRADG 607
L++ VD + + M G
Sbjct: 586 LINGLCKAGTVDKAFDVFQEMLGCG 610
Score = 54.7 bits (130), Expect(2) = 5e-08
Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Frame = -2
Query: 1324 FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYFSLVRAFYHHRGVKSAIDFLDLLA 1145
++S + ++++ A +L S G Y +++ V + L+ +
Sbjct: 1091 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150
Query: 1144 ERGFLPDVIFYGSFIRDICRE-SVDAAFELVEQMKRCGLEPDVVIWNTLVHGCVRAGQLS 968
+PD++ + + I +C+ VD A+EL ++ G P++V +N+LVHG ++ +
Sbjct: 1151 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 1210
Query: 967 RAVQVVADLERKSTAVIADAGTYNVLIAG 881
+A ++ ++ RK D TYN +I G
Sbjct: 1211 QAEYLLREMTRKQ-GCSPDIITYNTVIDG 1238
Score = 33.1 bits (74), Expect(2) = 5e-08
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -3
Query: 840 FHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRVLLDVYRI 661
F M+ + PD +T+S++I L + + E N +L M+++G Y L+D +
Sbjct: 1252 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 1311
Query: 660 NEMVDDTTSILEAMRADG 607
+D IL+ + + G
Sbjct: 1312 TGNLDKALEILQLLLSKG 1329
Score = 64.3 bits (155), Expect = 7e-07
Identities = 33/114 (28%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = -2
Query: 1219 YFSLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRE-SVDAAFELVEQMK 1043
Y ++ +F + SA L+ + E +PDV+ Y + I +C+ +VD AF++ ++M
Sbjct: 548 YSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML 607
Query: 1042 RCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAG 881
CG P++V +NTL+ G + ++ +A +++ + ++S D+ TY LI G
Sbjct: 608 GCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCT--PDSITYTCLING 659
Score = 63.5 bits (153), Expect = 1e-06
Identities = 60/235 (25%), Positives = 96/235 (40%), Gaps = 2/235 (0%)
Frame = -2
Query: 1576 LAVYSAAARQPGFRHDLPTYKALTSALALRRRFRAVELLLARMPRDGLRPGPALVLPLLR 1397
L + A Q G+ HD T L AL +R P+D L+ + R
Sbjct: 828 LGFFDWATSQEGYNHDTYTCNCLLQALLRLKR-----------PKDALQ--------VYR 868
Query: 1396 AYSCAGCPAHFLLRACPRPLTDRLFSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHY 1217
C P T F+ IH L + D+ A +L G P +
Sbjct: 869 NKLCCS----------PNMFT---FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILH 915
Query: 1216 FSLVRAFYHHRGVKSAIDFLDLLAERGFLP-DVIFYGSFIRDICRES-VDAAFELVEQMK 1043
+++ R + SA++ + E G P DV Y + + + + VD A LVE M
Sbjct: 916 NVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMV 975
Query: 1042 RCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLIAGN 878
G P+VV +++L+HG +AG+L A ++ + R + + TYN +I G+
Sbjct: 976 SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS--PNIVTYNTIIDGH 1028
Score = 63.5 bits (153), Expect = 1e-06
Identities = 65/230 (28%), Positives = 95/230 (41%), Gaps = 8/230 (3%)
Frame = -2
Query: 1552 RQPGFRHDLPTYKALTSALALRRRFRAVELLLARMPR-DGLRPGPALVLPLLRAYSCAGC 1376
++ G +L TY +L L RRF E LL M R G P ++ C
Sbjct: 1185 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL-CKSK 1243
Query: 1375 PAHFLLRACPRPLTDRL------FSSFIHSLVLSNDLKIARSVLLSAADLGFPVKARHYF 1214
+ + L+D L +S I SL + A +VL GF A Y
Sbjct: 1244 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYG 1303
Query: 1213 SLVRAFYHHRGVKSAIDFLDLLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMKRC 1037
+L+ F + A++ L LL +G PDV+ + FI + + + A EL+E M R
Sbjct: 1304 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 1363
Query: 1036 GLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLI 887
GL PD V +NTL+ G A AV + + + D TY L+
Sbjct: 1364 GLVPDTVTYNTLLKGFCDASLTEDAVDLFEVM--RQCGCEPDNATYTTLV 1411
>gb|OAY71696.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 513
Score = 80.9 bits (198), Expect(2) = 1e-18
Identities = 81/292 (27%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Frame = -2
Query: 1639 FLSNAAVFRAVTTAHATPRQILAVYSAAARQPGFRHDLPTYKALTSALALRRRFRAVELL 1460
F+S+AA R + +A P++ L V+++ A Q GF H+ TY AL LA R+ RAV+ L
Sbjct: 62 FVSHAAAVRLINSAQ-DPQRALDVFNSVALQRGFAHNDATYSALLLRLARARKLRAVDAL 120
Query: 1459 LARMPRDG---LRPGPALVLPLLRAYSCAGCPAHFLLRACP----RPLTDRLFSSFIHSL 1301
L RM R+ RP P L LL A + R+ P R + R ++ ++ L
Sbjct: 121 LRRMRREPCRFTRPPPLLASLLLSRRLAPPEAALRIFRSIPAIVRRRPSPRAVAATLNLL 180
Query: 1300 VLSNDLKIARSVL------------------LSAADLG--------------FPVKARHY 1217
V + +AR +L A DLG P Y
Sbjct: 181 VDAGRFDLARDLLSRVEHPNSCVRNIVVKLHCKAGDLGAALRVLDEMRASKTAPPNLITY 240
Query: 1216 FSLVRAFYHHRGVKSAIDFLD-LLAERGFLPDVIFYGSFIRDICRES-VDAAFELVEQMK 1043
+L++ +K A D ++ E PD + Y I CR+ +D A ++ M+
Sbjct: 241 STLMKGLCKQGRLKDAFHLFDKMIDEDRIAPDPLTYNVLIDGFCRQGRLDKASAVLSFMR 300
Query: 1042 RCGLEPDVVIWNTLVHGCVRAGQLSRAVQVVADLERKSTAVIADAGTYNVLI 887
EP+V ++TL++G + G++ A +V E +S+ + DA +Y LI
Sbjct: 301 NNNCEPNVFNYSTLMNGYCKEGKVEEAKKVFD--EMRSSGLAPDAVSYTTLI 350
Score = 43.1 bits (100), Expect(2) = 1e-18
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = -3
Query: 861 IREGILTFHVMVEMEMTPDVITFSMLIGGLGRAGRVRERNAMLRKMVRSGIPLDITCYRV 682
+ EGI M E DV+ ++++I GL + GRV E +L + G+ L+ + YR+
Sbjct: 359 VDEGIELAREMREKGCKADVVAYNVVIEGLTKGGRVGEAMGLLESLPHEGVRLNASSYRI 418
Query: 681 LLDVYRINEMVDDTTSILEAMRADGFLIH 595
+++ ++ +L M GF H
Sbjct: 419 VMNRLCARGEMERAVGLLGLMLGRGFAPH 447