BLASTX nr result
ID: Cheilocostus21_contig00035210
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00035210
(604 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 113 2e-25
ref|XP_009416391.1| PREDICTED: exosome complex component RRP41 h... 96 7e-21
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 96 3e-19
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 96 3e-19
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 95 6e-19
ref|XP_008360807.1| PREDICTED: exosome complex component RRP41 h... 89 6e-19
dbj|GAV67216.1| RNase_PH domain-containing protein/RNase_PH_C do... 91 8e-19
dbj|GAV87381.1| RNase_PH domain-containing protein/RNase_PH_C do... 91 1e-18
gb|ATZ69530.1| ORF3 polyprotein [Cacao Bacilliform SriLanka Virus] 94 2e-18
ref|XP_009366927.2| PREDICTED: exosome complex component RRP41 h... 87 3e-18
ref|XP_008347227.1| PREDICTED: exosome complex component RRP41 h... 87 4e-18
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 92 4e-18
ref|XP_011016717.1| PREDICTED: exosome complex component RRP41-l... 86 5e-18
dbj|BAU03181.1| hypothetical protein VIGAN_UM034000 [Vigna angul... 84 5e-18
ref|XP_009344088.1| PREDICTED: exosome complex component RRP41 h... 89 6e-18
ref|XP_008343793.1| PREDICTED: exosome complex component RRP41 h... 89 6e-18
ref|XP_020269060.1| exosome complex component RRP41 homolog isof... 89 6e-18
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 92 7e-18
ref|XP_020106196.1| exosome complex component RRP41 homolog isof... 87 8e-18
ref|XP_020106195.1| exosome complex component RRP41 homolog isof... 87 1e-17
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 113 bits (282), Expect = 2e-25
Identities = 56/95 (58%), Positives = 69/95 (72%)
Frame = +3
Query: 3 IISFFGKIANNKPSRVRWLLLTDYITGTGIPIHFEHINGKDNQLADALSRLTSCLIFLEW 182
IISFF K A NKPSRVRWL TDYITG G+PI+FEHI GKDN LAD LSRL S L L W
Sbjct: 1653 IISFFNKSAQNKPSRVRWLSFTDYITGVGVPINFEHIEGKDNLLADNLSRLVSTLC-LGW 1711
Query: 183 PKEEKLEQLELISAAL*EVQEKPSKEVQSQMTQAL 287
EK +QL+ + A+ EV++KP+K++ Q+ Q +
Sbjct: 1712 STPEKEQQLQFLETAMEEVRQKPNKDISLQLNQTI 1746
>ref|XP_009416391.1| PREDICTED: exosome complex component RRP41 homolog [Musa acuminata
subsp. malaccensis]
Length = 242
Score = 96.3 bits (238), Expect = 7e-21
Identities = 45/50 (90%), Positives = 50/50 (100%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRG 453
K+TLLQMDAKLP+DIFENVMQLA+EGCKAIAQYIRGVLL+NTK+LECRRG
Sbjct: 192 KVTLLQMDAKLPMDIFENVMQLAIEGCKAIAQYIRGVLLENTKQLECRRG 241
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 95.5 bits (236), Expect = 3e-19
Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 4/132 (3%)
Frame = +3
Query: 3 IISFFGKIANNKPSRVRWLLLTDYITGTGIPIHFEHINGKDNQLADALSRLTSCLIFLEW 182
IISFF K NKPSRVRW+ TD++TG GIP++ EHI+GK+N LADALSRL + +F E
Sbjct: 1775 IISFFNKSNVNKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEP 1834
Query: 183 PKEEKL-EQLELISAAL*EVQEKPS---KEVQSQMTQALLTLCLSLENTNGCLNNFIIGC 350
++K + L + AAL E +E P +E S +T++ + LSL + + I C
Sbjct: 1835 QCQDKFQDDLGKLEAALLEKKEAPQAMHEEYVSLLTRSADRITLSLYSMRDSSPSRIYSC 1894
Query: 351 NSSKASPSKSIM 386
S K P K+++
Sbjct: 1895 RSGK-EPMKALI 1905
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 95.5 bits (236), Expect = 3e-19
Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 4/132 (3%)
Frame = +3
Query: 3 IISFFGKIANNKPSRVRWLLLTDYITGTGIPIHFEHINGKDNQLADALSRLTSCLIFLEW 182
IISFF K NKPSRVRW+ TD++TG GIP++ EHI+GK+N LADALSRL + +F E
Sbjct: 1778 IISFFNKSNVNKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEP 1837
Query: 183 PKEEKL-EQLELISAAL*EVQEKPS---KEVQSQMTQALLTLCLSLENTNGCLNNFIIGC 350
++K + L + AAL E +E P +E S +T++ + LSL + + I C
Sbjct: 1838 QCQDKFQDDLGKLEAALLEKKEAPQAMHEEYVSLLTRSADRITLSLYSMRDSSPSRIYSC 1897
Query: 351 NSSKASPSKSIM 386
S K P K+++
Sbjct: 1898 RSGK-EPMKALI 1908
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 94.7 bits (234), Expect = 6e-19
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Frame = +3
Query: 3 IISFFGKIANNKPSRVRWLLLTDYITGTGIPIHFEHINGKDNQLADALSRLTSCLIFLEW 182
IISFF K NKPSRVRW+ TD++TG GIP++ EHI+GK+N LADALSRL + +F E
Sbjct: 1766 IISFFNKSNVNKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEP 1825
Query: 183 PKEEKL-EQLELISAAL*EVQEKPS---KEVQSQMTQALLTLCLSLENTNGCLNNFIIGC 350
++K + L + AAL E +E P E S +T++ + LSL +T G + C
Sbjct: 1826 QCQDKFQDDLGKLEAALQEKKEAPQAMHAEYVSLLTKSADRITLSLCSTRGSSLSRTYSC 1885
Query: 351 NSSKASPSKSIM 386
K P K+++
Sbjct: 1886 RPGK-EPMKALI 1896
>ref|XP_008360807.1| PREDICTED: exosome complex component RRP41 homolog [Malus
domestica]
Length = 140
Score = 88.6 bits (218), Expect = 6e-19
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRGT 450
K+TLLQMDAKLP+DIFENVMQLA+EGCKA+A YIR VLL+NTK+LE RRGT
Sbjct: 90 KVTLLQMDAKLPLDIFENVMQLAIEGCKAVATYIREVLLENTKQLEYRRGT 140
>dbj|GAV67216.1| RNase_PH domain-containing protein/RNase_PH_C domain-containing
protein, partial [Cephalotus follicularis]
Length = 223
Score = 90.5 bits (223), Expect = 8e-19
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRG 453
K+TLLQMDAKLP+DIFENVM+LA EGCKAIA YIR VLL+NTKELECRRG
Sbjct: 173 KVTLLQMDAKLPMDIFENVMELATEGCKAIANYIREVLLENTKELECRRG 222
>dbj|GAV87381.1| RNase_PH domain-containing protein/RNase_PH_C domain-containing
protein, partial [Cephalotus follicularis]
Length = 241
Score = 90.5 bits (223), Expect = 1e-18
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRG 453
K+TLLQMDAKLP+DIFENVM+LA EGCKAIA YIR VLL+NTKELECRRG
Sbjct: 191 KVTLLQMDAKLPMDIFENVMELATEGCKAIANYIREVLLENTKELECRRG 240
>gb|ATZ69530.1| ORF3 polyprotein [Cacao Bacilliform SriLanka Virus]
Length = 1772
Score = 93.6 bits (231), Expect = 2e-18
Identities = 54/101 (53%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Frame = +3
Query: 3 IISFFGKIANNKPSRVRWLLLTDYITGTGIPIHFEHINGKDNQLADALSRLTSCLIFLEW 182
IISF+ K A NKPSRVRWL D++TGTG+ ++ EHI GK N LAD LSRL L+
Sbjct: 1598 IISFYNKSAQNKPSRVRWLKFVDFLTGTGVEVNIEHITGKLNNLADHLSRLVLLLVSRGE 1657
Query: 183 PKEE-KLEQLELISAAL*EVQEKPSKEVQSQMTQALLTLCL 302
P+E+ KL QLE + + EV +KP+KE Q QMTQ L+++ L
Sbjct: 1658 PEEDSKLCQLEEV---IQEVVQKPTKEAQ-QMTQTLVSVLL 1694
>ref|XP_009366927.2| PREDICTED: exosome complex component RRP41 homolog, partial [Pyrus
x bretschneideri]
Length = 156
Score = 87.4 bits (215), Expect = 3e-18
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRGT 450
KITLLQMDAKLP+DIFENV+QLA+EGCKA+A YIR VLL+NTK+LE RRGT
Sbjct: 106 KITLLQMDAKLPLDIFENVVQLAIEGCKAVATYIREVLLENTKQLEYRRGT 156
>ref|XP_008347227.1| PREDICTED: exosome complex component RRP41 homolog [Malus
domestica]
Length = 155
Score = 87.0 bits (214), Expect = 4e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRGT 450
K+TLLQMDAKLP+DIFENVMQLA+EGCKA+A YIR VLL+NTK+LE R+GT
Sbjct: 105 KVTLLQMDAKLPLDIFENVMQLAIEGCKAVATYIREVLLENTKQLEYRQGT 155
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 92.4 bits (228), Expect = 4e-18
Identities = 58/144 (40%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Frame = +3
Query: 3 IISFFGKIANNKPSRVRWLLLTDYITGTGIPIHFEHINGKDNQLADALSRLTSCLIFLEW 182
IISFF K NKPSRVRW+ TD++TG GIP++ EHI+GK+N LADALSRL + +F E
Sbjct: 1289 IISFFNKSNVNKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEP 1348
Query: 183 PKEEKL-EQLELISAAL*EVQEKPS---KEVQSQMTQALLTLCLSLENTNGCLNNFIIGC 350
++K + L + AAL E +E P +E S + ++ + LSL + N C
Sbjct: 1349 QCQDKFQDDLGKLEAALQEKKEAPQAMHEEYVSLLIRSADRITLSLCSMRDSSRNRTYSC 1408
Query: 351 NSSKASPSKSIMM*ADSVTNCNSK 422
K P+K+++ +C SK
Sbjct: 1409 RPGK-EPTKALIC---EQKSCQSK 1428
>ref|XP_011016717.1| PREDICTED: exosome complex component RRP41-like [Populus
euphratica]
Length = 140
Score = 86.3 bits (212), Expect = 5e-18
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRG 453
K+TLLQMDAKLPID FENVMQLA+EGCKAIA YIR VLL+NTK+LE RRG
Sbjct: 90 KVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREVLLENTKQLEYRRG 139
>dbj|BAU03181.1| hypothetical protein VIGAN_UM034000 [Vigna angularis var.
angularis]
Length = 77
Score = 84.3 bits (207), Expect = 5e-18
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRG 453
K+TLLQMD+KLPIDI ENVMQLA+EGCKAIA YIR +LL+NTK+LE RRG
Sbjct: 27 KVTLLQMDSKLPIDILENVMQLAIEGCKAIANYIREILLENTKQLEYRRG 76
>ref|XP_009344088.1| PREDICTED: exosome complex component RRP41 homolog [Pyrus x
bretschneideri]
Length = 241
Score = 88.6 bits (218), Expect = 6e-18
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRGT 450
K+TLLQMDAKLP+DIFENVMQLA+EGCKA+A YIR VLL+NTK+LE RRGT
Sbjct: 191 KVTLLQMDAKLPLDIFENVMQLAIEGCKAVATYIREVLLENTKQLEYRRGT 241
>ref|XP_008343793.1| PREDICTED: exosome complex component RRP41 homolog [Malus
domestica]
ref|XP_008343794.1| PREDICTED: exosome complex component RRP41 homolog [Malus
domestica]
Length = 241
Score = 88.6 bits (218), Expect = 6e-18
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRGT 450
K+TLLQMDAKLP+DIFENVMQLA+EGCKA+A YIR VLL+NTK+LE RRGT
Sbjct: 191 KVTLLQMDAKLPLDIFENVMQLAIEGCKAVATYIRQVLLENTKQLEYRRGT 241
>ref|XP_020269060.1| exosome complex component RRP41 homolog isoform X2 [Asparagus
officinalis]
ref|XP_020269061.1| exosome complex component RRP41 homolog isoform X2 [Asparagus
officinalis]
Length = 242
Score = 88.6 bits (218), Expect = 6e-18
Identities = 41/50 (82%), Positives = 48/50 (96%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRG 453
K+TLLQMDAKLP+DIFENVMQLA+EGCKAIA YIR VLL++TK+LECR+G
Sbjct: 192 KVTLLQMDAKLPMDIFENVMQLAIEGCKAIAHYIRDVLLEHTKQLECRKG 241
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 91.7 bits (226), Expect = 7e-18
Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Frame = +3
Query: 3 IISFFGKIANNKPSRVRWLLLTDYITGTGIPIHFEHINGKDNQLADALSRLTSCLIFLEW 182
IISFF K NKPSRVRW+ TD++TG GIP++ EHI+GK+N LADALSRL + +F E
Sbjct: 1767 IISFFNKSNVNKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEP 1826
Query: 183 PKEEKL-EQLELISAAL*EVQEKPS---KEVQSQMTQALLTLCLSLENTNGCLNNFIIGC 350
++K + L + AAL E +E P E S + ++ + LSL + N C
Sbjct: 1827 QCQDKFQDDLGRLEAALQEKKEAPQAMHAEYVSLLIRSADRITLSLCSMRDSSRNRTYSC 1886
Query: 351 NSSKASPSKSIMM*ADSVTNCNSK 422
K P+K+++ +C SK
Sbjct: 1887 RPGK-EPTKALIC---EQKSCQSK 1906
>ref|XP_020106196.1| exosome complex component RRP41 homolog isoform X3 [Ananas comosus]
Length = 202
Score = 87.4 bits (215), Expect = 8e-18
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRG 453
K+TLLQMDAKLP+DIFENVMQLA+EGCKAIA YIR VLL+NTK+LE RRG
Sbjct: 152 KVTLLQMDAKLPMDIFENVMQLAIEGCKAIANYIREVLLENTKQLESRRG 201
>ref|XP_020106195.1| exosome complex component RRP41 homolog isoform X2 [Ananas comosus]
Length = 214
Score = 87.4 bits (215), Expect = 1e-17
Identities = 42/50 (84%), Positives = 47/50 (94%)
Frame = -3
Query: 602 KITLLQMDAKLPIDIFENVMQLAMEGCKAIAQYIRGVLLDNTKELECRRG 453
K+TLLQMDAKLP+DIFENVMQLA+EGCKAIA YIR VLL+NTK+LE RRG
Sbjct: 164 KVTLLQMDAKLPMDIFENVMQLAIEGCKAIANYIREVLLENTKQLESRRG 213