BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00035031
         (590 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA50781.1| Putative ribonuclease H protein [Apostasia shenzh...    51   4e-06
ref|XP_020686079.1| uncharacterized protein LOC110102200 [Dendro...    40   1e-05

>gb|PKA50781.1| Putative ribonuclease H protein [Apostasia shenzhenica]
          Length = 882

 Score = 51.2 bits (121), Expect(2) = 4e-06
 Identities = 23/74 (31%), Positives = 42/74 (56%)
 Frame = +3

Query: 321 GRITLVNSTILSSPIHTLISSWMSH*YTKRLNQITMHFVWADCSSAKSIHILNCHNVTSP 500
           GR+TL+NS + S PI+++  ++M       + Q+   F+W+   +  S+H +N +++  P
Sbjct: 307 GRLTLINSVLSSIPIYSMSHTFMPKSILASIEQLIRQFLWSGDMTRNSLHYVNWNSIAKP 366

Query: 501 KYFGALVSKTFSFF 542
           K FG L    FS +
Sbjct: 367 KAFGGLDIHRFSLW 380



 Score = 27.3 bits (59), Expect(2) = 4e-06
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +2

Query: 92  SGLNINLNKSRIYFPKSCNGQIKKGILQIFQAHEQLPIQYLCATISTKPPSAHNLQSCLS 271
           SG  IN  KS I+F        K+ ++ I   H+Q   +YL   +  + P   +  S +S
Sbjct: 230 SGQRINQAKSSIFFSNKTKRSRKRMLVNILGFHQQHQGKYLGIPLLFRKPKKDDYISMIS 289


>ref|XP_020686079.1| uncharacterized protein LOC110102200 [Dendrobium catenatum]
          Length = 1184

 Score = 39.7 bits (91), Expect(2) = 1e-05
 Identities = 20/73 (27%), Positives = 37/73 (50%)
 Frame = +3

Query: 300 RELFS*VGRITLVNSTILSSPIHTLISSWMSH*YTKRLNQITMHFVWADCSSAKSIHILN 479
           R+  S  G+I L+ S++LS P + + +S +       L ++  +F+W   +  + IH + 
Sbjct: 637 RKCLSLGGKIVLIESSLLSMPNYLITNSLIPKRVLLELEKLCRNFIWHKQNGDRGIHYVA 696

Query: 480 CHNVTSPKYFGAL 518
              +  PK FG L
Sbjct: 697 WDEICKPKKFGGL 709



 Score = 37.4 bits (85), Expect(2) = 1e-05
 Identities = 20/76 (26%), Positives = 38/76 (50%)
 Frame = +2

Query: 65  KNAQDFQNFSGLNINLNKSRIYFPKSCNGQIKKGILQIFQAHEQLPIQYLCATISTKPPS 244
           K  +DF N+SG  +NLNKS I F K+   +++K I+ +        + YL   ++ +   
Sbjct: 558 KIVEDFCNWSGQRVNLNKSHILFGKNVRKKMRKKIINLLGIKMAKEMIYLGVKMALRRLK 617

Query: 245 AHNLQSCLSSFINNQN 292
             + Q  + + ++  N
Sbjct: 618 IADFQELIGNVLDRLN 633