BLASTX nr result

ID: Cheilocostus21_contig00034817 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00034817
         (423 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009387866.1| PREDICTED: zinc finger CCCH domain-containin...    68   2e-10

>ref|XP_009387866.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Musa
           acuminata subsp. malaccensis]
          Length = 1689

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 52/149 (34%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
 Frame = -2

Query: 422 DHSVVEQLPPPLSLPEDDGNNLVRVEDYDVDDSHLIGFAFSDASAFXXXXXXXXXXXXXX 243
           D +VV++ PPP   P+D        E+ D  D+ + G    D S                
Sbjct: 18  DDAVVQRTPPPPVSPDD--------EEADQGDAQVAGAYEMDDS---------------- 53

Query: 242 XXXXXXXXXAHLRTSPIADAPSFEPSESTIEG--------TAGMVLEVTPLGPVKRKRGR 87
                      L +SP A +P+FEPS+    G         A  V  V   GPVKRKRGR
Sbjct: 54  ----------QLVSSPFALSPAFEPSQEDAAGEEALPMSEAAAAVAAVEASGPVKRKRGR 103

Query: 86  PPKGQSAGRKP-PVTXXXXXEVCFICFDG 3
           PPK    GR P P       EVCFICFDG
Sbjct: 104 PPKAHGPGRAPVPKKKKEEEEVCFICFDG 132


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