BLASTX nr result

ID: Cheilocostus21_contig00034758 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00034758
         (578 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY05306.1| ion peptidase N-terminal domain and RING finger p...    57   3e-07
dbj|GAU33044.1| hypothetical protein TSUD_151990 [Trifolium subt...    57   3e-06
ref|XP_013459406.1| zinc finger, C3HC4 type (RING finger) protei...    57   4e-06
ref|XP_013459405.1| zinc finger, C3HC4 type (RING finger) protei...    57   4e-06

>gb|PNY05306.1| ion peptidase N-terminal domain and RING finger protein 1
           [Trifolium pratense]
          Length = 125

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = -3

Query: 213 IWVEGRRQFRNFRSWDQAVYCAAEVEWIRDILPRKGPKKE 94
           I +EGRR+FRN RSWDQ  Y  AEVEWI+DI+P +G K++
Sbjct: 41  IEIEGRRRFRNLRSWDQDGYRVAEVEWIQDIMPPEGTKEK 80


>dbj|GAU33044.1| hypothetical protein TSUD_151990 [Trifolium subterraneum]
          Length = 444

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = -3

Query: 213 IWVEGRRQFRNFRSWDQAVYCAAEVEWIRDILPRKGPKKE 94
           I +EGRR+FRN RSWDQ  Y  AEVEWI+DI+P +G K++
Sbjct: 362 IEIEGRRRFRNLRSWDQDGYRVAEVEWIQDIMPPEGTKEK 401


>ref|XP_013459406.1| zinc finger, C3HC4 type (RING finger) protein [Medicago truncatula]
 gb|KEH33437.1| zinc finger, C3HC4 type (RING finger) protein [Medicago truncatula]
          Length = 433

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -3

Query: 213 IWVEGRRQFRNFRSWDQAVYCAAEVEWIRDILPRKGPKK 97
           I +EGRR+FRN RSWDQ  Y  AEVEWI+DI+P +G K+
Sbjct: 298 IEIEGRRRFRNLRSWDQDGYRVAEVEWIQDIMPPEGTKE 336


>ref|XP_013459405.1| zinc finger, C3HC4 type (RING finger) protein [Medicago truncatula]
 gb|KEH33436.1| zinc finger, C3HC4 type (RING finger) protein [Medicago truncatula]
          Length = 480

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -3

Query: 213 IWVEGRRQFRNFRSWDQAVYCAAEVEWIRDILPRKGPKK 97
           I +EGRR+FRN RSWDQ  Y  AEVEWI+DI+P +G K+
Sbjct: 345 IEIEGRRRFRNLRSWDQDGYRVAEVEWIQDIMPPEGTKE 383


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