BLASTX nr result

ID: Cheilocostus21_contig00034743 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00034743
         (968 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009385660.1| PREDICTED: THO complex subunit 1 isoform X2 ...   114   1e-24
ref|XP_009385659.1| PREDICTED: THO complex subunit 1 isoform X1 ...   114   2e-24
ref|XP_010933275.1| PREDICTED: THO complex subunit 1 [Elaeis gui...    91   2e-16
ref|XP_008797925.1| PREDICTED: THO complex subunit 1 isoform X1 ...    86   8e-15
ref|XP_008797926.1| PREDICTED: THO complex subunit 1 isoform X2 ...    86   9e-15
ref|XP_020579044.1| THO complex subunit 1 [Phalaenopsis equestris]     67   2e-08
gb|ONK57198.1| uncharacterized protein A4U43_C10F17610 [Asparagu...    66   4e-08
ref|XP_020248097.1| THO complex subunit 1 isoform X2 [Asparagus ...    66   4e-08
ref|XP_020248096.1| THO complex subunit 1 isoform X1 [Asparagus ...    66   4e-08
gb|PKA48241.1| Rhodanese-like domain-containing protein 8, chlor...    62   8e-07
ref|XP_006649251.1| PREDICTED: THO complex subunit 1 [Oryza brac...    59   5e-06

>ref|XP_009385660.1| PREDICTED: THO complex subunit 1 isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 563

 Score =  114 bits (285), Expect = 1e-24
 Identities = 61/87 (70%), Positives = 67/87 (77%), Gaps = 5/87 (5%)
 Frame = -3

Query: 966 VASAAAENDGVGSGAELEDGAAPMDSDAVTG-IQKQSPDVDSIHEAGQSEAEGEVEANAK 790
           VASAA E DGVGSGAELEDG APMDSDA  G +QKQSPD+DS HEAGQSEAEGE E +AK
Sbjct: 469 VASAAVETDGVGSGAELEDGVAPMDSDATAGEVQKQSPDMDSGHEAGQSEAEGEAEGDAK 528

Query: 789 AD----IEAADHDNINPKEEANSTSID 721
            D    +EAA HD  +PKE+ N TS D
Sbjct: 529 TDVKMEVEAAVHDETSPKEDGNPTSRD 555


>ref|XP_009385659.1| PREDICTED: THO complex subunit 1 isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 653

 Score =  114 bits (285), Expect = 2e-24
 Identities = 61/87 (70%), Positives = 67/87 (77%), Gaps = 5/87 (5%)
 Frame = -3

Query: 966 VASAAAENDGVGSGAELEDGAAPMDSDAVTG-IQKQSPDVDSIHEAGQSEAEGEVEANAK 790
           VASAA E DGVGSGAELEDG APMDSDA  G +QKQSPD+DS HEAGQSEAEGE E +AK
Sbjct: 559 VASAAVETDGVGSGAELEDGVAPMDSDATAGEVQKQSPDMDSGHEAGQSEAEGEAEGDAK 618

Query: 789 AD----IEAADHDNINPKEEANSTSID 721
            D    +EAA HD  +PKE+ N TS D
Sbjct: 619 TDVKMEVEAAVHDETSPKEDGNPTSRD 645


>ref|XP_010933275.1| PREDICTED: THO complex subunit 1 [Elaeis guineensis]
          Length = 652

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 6/96 (6%)
 Frame = -3

Query: 966 VASAAAENDGVGSGAELEDGAAPMDSD--AVTGIQKQSPDVDSIHEAGQSEAEGEVEANA 793
           VA+ A E DG G+G ELEDG APMDSD  AV   QKQSP++DS HEAGQSEAE E EA  
Sbjct: 556 VATPAVETDGGGNGTELEDGVAPMDSDAAAVEESQKQSPEMDSGHEAGQSEAETEAEAEN 615

Query: 792 KADIE----AADHDNINPKEEANSTSIDAHIGDAES 697
           ++DI+          +NP  + NS S D+H GD E+
Sbjct: 616 RSDIKVDAVTGVAREVNPDTDPNSLSKDSHGGDREN 651


>ref|XP_008797925.1| PREDICTED: THO complex subunit 1 isoform X1 [Phoenix dactylifera]
          Length = 583

 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 50/96 (52%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
 Frame = -3

Query: 966 VASAAAENDGVGSGAELEDGAAPMDSDA--VTGIQKQSPDVDSIHEAGQSEAEGEVEANA 793
           VA   AE DG G+G ELEDG APMDSDA  V   QKQSP++DS HEAGQSEAE E EA  
Sbjct: 487 VAMPVAETDGGGNGTELEDGVAPMDSDAAAVEESQKQSPEMDSGHEAGQSEAETEAEAEN 546

Query: 792 KADIE----AADHDNINPKEEANSTSIDAHIGDAES 697
           ++DI+          ++P  + N  S D+H GD E+
Sbjct: 547 RSDIKVEAVTGAVREVDPDTDPNPLSKDSHGGDREN 582


>ref|XP_008797926.1| PREDICTED: THO complex subunit 1 isoform X2 [Phoenix dactylifera]
          Length = 651

 Score = 85.9 bits (211), Expect = 9e-15
 Identities = 50/96 (52%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
 Frame = -3

Query: 966 VASAAAENDGVGSGAELEDGAAPMDSDA--VTGIQKQSPDVDSIHEAGQSEAEGEVEANA 793
           VA   AE DG G+G ELEDG APMDSDA  V   QKQSP++DS HEAGQSEAE E EA  
Sbjct: 555 VAMPVAETDGGGNGTELEDGVAPMDSDAAAVEESQKQSPEMDSGHEAGQSEAETEAEAEN 614

Query: 792 KADIE----AADHDNINPKEEANSTSIDAHIGDAES 697
           ++DI+          ++P  + N  S D+H GD E+
Sbjct: 615 RSDIKVEAVTGAVREVDPDTDPNPLSKDSHGGDREN 650


>ref|XP_020579044.1| THO complex subunit 1 [Phalaenopsis equestris]
          Length = 632

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 13/72 (18%)
 Frame = -3

Query: 966 VASAAAENDGVGSGAELEDGAAPMDSDAVTGI------------QKQSPD-VDSIHEAGQ 826
           VA+  A+ +G GSGAE++DGAAPMDSDA T              +KQSPD V +  EAGQ
Sbjct: 560 VAATGADAEGGGSGAEMDDGAAPMDSDAATAASSHGGVASPEDGEKQSPDIVVASQEAGQ 619

Query: 825 SEAEGEVEANAK 790
           SEAEGE+EA+ K
Sbjct: 620 SEAEGELEADVK 631


>gb|ONK57198.1| uncharacterized protein A4U43_C10F17610 [Asparagus officinalis]
          Length = 653

 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
 Frame = -3

Query: 966 VASAAAENDGVGSGAELEDGAAPMDSDAV------------TGIQKQSPDVDSIHEAGQS 823
           VA+ A E DG GSGAELE+GA PM+SDA                 KQSPD+D   EA  S
Sbjct: 549 VATPATETDG-GSGAELEEGAIPMESDAAGLNIAQGGDTTPEDATKQSPDIDMGQEAVHS 607

Query: 822 EAEGEVEANAKADIEAADHDNINPKEEANSTS 727
           EAE E EA+A+AD EA       P  + ++ S
Sbjct: 608 EAEAEAEADAEADAEAEAEAEAKPDIKGDTES 639


>ref|XP_020248097.1| THO complex subunit 1 isoform X2 [Asparagus officinalis]
          Length = 662

 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
 Frame = -3

Query: 966 VASAAAENDGVGSGAELEDGAAPMDSDAV------------TGIQKQSPDVDSIHEAGQS 823
           VA+ A E DG GSGAELE+GA PM+SDA                 KQSPD+D   EA  S
Sbjct: 558 VATPATETDG-GSGAELEEGAIPMESDAAGLNIAQGGDTTPEDATKQSPDIDMGQEAVHS 616

Query: 822 EAEGEVEANAKADIEAADHDNINPKEEANSTS 727
           EAE E EA+A+AD EA       P  + ++ S
Sbjct: 617 EAEAEAEADAEADAEAEAEAEAKPDIKGDTES 648


>ref|XP_020248096.1| THO complex subunit 1 isoform X1 [Asparagus officinalis]
          Length = 663

 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
 Frame = -3

Query: 966 VASAAAENDGVGSGAELEDGAAPMDSDAV------------TGIQKQSPDVDSIHEAGQS 823
           VA+ A E DG GSGAELE+GA PM+SDA                 KQSPD+D   EA  S
Sbjct: 559 VATPATETDG-GSGAELEEGAIPMESDAAGLNIAQGGDTTPEDATKQSPDIDMGQEAVHS 617

Query: 822 EAEGEVEANAKADIEAADHDNINPKEEANSTS 727
           EAE E EA+A+AD EA       P  + ++ S
Sbjct: 618 EAEAEAEADAEADAEAEAEAEAKPDIKGDTES 649


>gb|PKA48241.1| Rhodanese-like domain-containing protein 8, chloroplastic
           [Apostasia shenzhenica]
          Length = 915

 Score = 62.0 bits (149), Expect = 8e-07
 Identities = 38/72 (52%), Positives = 39/72 (54%), Gaps = 12/72 (16%)
 Frame = -3

Query: 963 ASAAAENDGVGSGAELEDGAAPMDSDAVTGI------------QKQSPDVDSIHEAGQSE 820
           ASA  E DG G G EL+D AAPMDSDA                QKQSPD D   EA QSE
Sbjct: 433 ASAGVETDGGGCGTELDDAAAPMDSDAAILASSHCPAISPEEGQKQSPDTDLGQEAVQSE 492

Query: 819 AEGEVEANAKAD 784
            E EVE   KAD
Sbjct: 493 PEAEVETEIKAD 504


>ref|XP_006649251.1| PREDICTED: THO complex subunit 1 [Oryza brachyantha]
          Length = 644

 Score = 59.3 bits (142), Expect = 5e-06
 Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
 Frame = -3

Query: 966 VASAAAENDGVGSGAELEDGAAPMDSD--AVTGIQKQSPDVDSIHEAGQSEAEGEVEANA 793
           VASA  E DG GSGAE E+GA PMDSD  A+   +KQSP+  S  E+GQ EAE + E N 
Sbjct: 571 VASATPETDGGGSGAEPEEGAVPMDSDNAAIDEGRKQSPEEVSGPESGQCEAEADGEDNM 630

Query: 792 K 790
           K
Sbjct: 631 K 631


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