BLASTX nr result

ID: Cheilocostus21_contig00034578 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00034578
         (955 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009402338.1| PREDICTED: protein UPSTREAM OF FLC-like [Mus...    87   3e-15
ref|XP_010920698.1| PREDICTED: protein UPSTREAM OF FLC-like [Ela...    81   3e-13
ref|XP_010937705.1| PREDICTED: protein UPSTREAM OF FLC [Elaeis g...    78   3e-12
ref|XP_018675671.1| PREDICTED: protein UPSTREAM OF FLC-like isof...    68   5e-09
ref|XP_009384890.1| PREDICTED: protein UPSTREAM OF FLC-like isof...    68   5e-09
ref|XP_010253296.1| PREDICTED: protein UPSTREAM OF FLC [Nelumbo ...    62   5e-07

>ref|XP_009402338.1| PREDICTED: protein UPSTREAM OF FLC-like [Musa acuminata subsp.
           malaccensis]
          Length = 435

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 45/56 (80%), Positives = 48/56 (85%)
 Frame = +2

Query: 293 NACRSSKLELAEKEIEGVRAKCIPLMLKATERREANPPISRSTHGSKRIDNEPQEE 460
           NA R SKLELAEKEIEGVRAKCIP   KA ERREAN PISRST GSKRI++EPQ+E
Sbjct: 380 NADRCSKLELAEKEIEGVRAKCIPRKHKAVERREANAPISRSTLGSKRINDEPQDE 435


>ref|XP_010920698.1| PREDICTED: protein UPSTREAM OF FLC-like [Elaeis guineensis]
          Length = 430

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 41/56 (73%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
 Frame = +2

Query: 293 NACRSSKLELAEKEI-EGVRAKCIPLMLKATERREANPPISRSTHGSKRIDNEPQE 457
           NA RSSK+E+ EKEI EGVRAKCIP   +AT R+EANPPISRSTHGSKRI++EP +
Sbjct: 372 NADRSSKVEVVEKEIDEGVRAKCIPRKPRATTRKEANPPISRSTHGSKRINDEPSQ 427


>ref|XP_010937705.1| PREDICTED: protein UPSTREAM OF FLC [Elaeis guineensis]
          Length = 428

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 39/53 (73%), Positives = 44/53 (83%)
 Frame = +2

Query: 293 NACRSSKLELAEKEIEGVRAKCIPLMLKATERREANPPISRSTHGSKRIDNEP 451
           NA RSSKLELAEKEIEGVRAKCIP   +AT R+E  PPIS S HGS+RI++EP
Sbjct: 373 NADRSSKLELAEKEIEGVRAKCIPRKPRATARKETIPPISGSNHGSRRINDEP 425


>ref|XP_018675671.1| PREDICTED: protein UPSTREAM OF FLC-like isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 482

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 39/57 (68%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = +2

Query: 293 NACRSSKLELAEKEIEGVRAKCIP-LMLKATERREANPPISRSTHGSKRIDNEPQEE 460
           NACRSSKLE  EKEIEGVRAKCIP      TERREA  PISR   G  RI++EP EE
Sbjct: 429 NACRSSKLEPTEKEIEGVRAKCIPRKRTNPTERREATVPISR---GCARIEDEPHEE 482


>ref|XP_009384890.1| PREDICTED: protein UPSTREAM OF FLC-like isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 484

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 39/57 (68%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = +2

Query: 293 NACRSSKLELAEKEIEGVRAKCIP-LMLKATERREANPPISRSTHGSKRIDNEPQEE 460
           NACRSSKLE  EKEIEGVRAKCIP      TERREA  PISR   G  RI++EP EE
Sbjct: 431 NACRSSKLEPTEKEIEGVRAKCIPRKRTNPTERREATVPISR---GCARIEDEPHEE 484


>ref|XP_010253296.1| PREDICTED: protein UPSTREAM OF FLC [Nelumbo nucifera]
          Length = 444

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = +2

Query: 293 NACRSSKLELAEKEIEGVRAKCIPLMLKATERREANPPISRSTHGSKRIDNEP 451
           NA RSSKL+LA+KEIEGVRAKCIP   K   ++E+N     S HGSKR  +EP
Sbjct: 386 NADRSSKLDLADKEIEGVRAKCIPRKPKTPGKKESNDVSRSSIHGSKRHGDEP 438


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