BLASTX nr result

ID: Cheilocostus21_contig00034518 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00034518
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009401608.1| PREDICTED: protein SCARECROW 2-like [Musa ac...    73   4e-12
ref|XP_009384356.1| PREDICTED: protein SCARECROW 2-like [Musa ac...    55   8e-06

>ref|XP_009401608.1| PREDICTED: protein SCARECROW 2-like [Musa acuminata subsp.
           malaccensis]
          Length = 802

 Score = 73.2 bits (178), Expect = 4e-12
 Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -2

Query: 265 RQEQDKMVRKRLASELELPKDASYXXXXXXXXXXXXXXXXXXGNPALLGDI-PGQHSALF 89
           ++EQDKMVRKRLASEL+L  D+ Y                   NP  LGD+ PGQ S LF
Sbjct: 89  QEEQDKMVRKRLASELDLQSDSPYGPARLSRRTTTGASSSSSANPTFLGDVLPGQPSPLF 148

Query: 88  HPPSTVPVDVDQQQSATPGLV 26
           +PPST+PVDV QQ +A   L+
Sbjct: 149 NPPSTLPVDVGQQSAAASVLL 169


>ref|XP_009384356.1| PREDICTED: protein SCARECROW 2-like [Musa acuminata subsp.
           malaccensis]
          Length = 783

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
 Frame = -2

Query: 271 HDRQEQDKMVRKRLASELELPKDASYXXXXXXXXXXXXXXXXXXGNPALLGDIPGQHSAL 92
           H ++EQDKMV+KRLASEL+L    S                     PA  GD+ GQ S L
Sbjct: 80  HQQEEQDKMVKKRLASELDLQSGPS--SYSAARLPRRGVSTGSSATPAFPGDLSGQPSLL 137

Query: 91  FHPPSTVPVDVDQQQ-----------SATPGLVAPASAAP 5
           F+P ST  VDV Q             S+TP +  P+  AP
Sbjct: 138 FNPSSTPSVDVGQHNAAASVLLPVTTSSTPPVPLPSLPAP 177


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