BLASTX nr result
ID: Cheilocostus21_contig00034048
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00034048
(1640 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KQL28110.1| hypothetical protein SETIT_020253mg [Setaria ital... 91 1e-17
ref|XP_009409355.1| PREDICTED: heterogeneous nuclear ribonucleop... 93 9e-17
ref|XP_009380446.1| PREDICTED: heterogeneous nuclear ribonucleop... 92 2e-16
ref|XP_020573784.1| heterogeneous nuclear ribonucleoprotein A1, ... 92 2e-16
gb|AQK59718.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 92 2e-16
ref|XP_010925454.1| PREDICTED: heterogeneous nuclear ribonucleop... 91 4e-16
dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein ... 91 4e-16
ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea ma... 91 4e-16
ref|XP_015689436.1| PREDICTED: glycine-rich RNA-binding protein ... 91 4e-16
gb|PAN04785.1| hypothetical protein PAHAL_A00871 [Panicum hallii... 91 5e-16
ref|XP_004951463.1| glycine-rich RNA-binding protein 3, mitochon... 91 5e-16
ref|XP_015626578.1| PREDICTED: glycine-rich RNA-binding protein ... 91 5e-16
gb|AQK59726.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 92 8e-16
ref|XP_008676544.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 90 8e-16
gb|PKA63629.1| Heterogeneous nuclear ribonucleoprotein 1 [Aposta... 90 9e-16
gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indi... 91 9e-16
gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japo... 91 1e-15
gb|PAN23658.1| hypothetical protein PAHAL_J01619 [Panicum hallii] 89 1e-15
gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea m... 90 1e-15
ref|NP_001131946.2| RNA-binding (RRM/RBD/RNP motifs) family prot... 90 1e-15
>gb|KQL28110.1| hypothetical protein SETIT_020253mg [Setaria italica]
Length = 184
Score = 91.3 bits (225), Expect = 1e-17
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE EH+IDGRT
Sbjct: 70 ETFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRT 124
>ref|XP_009409355.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Musa
acuminata subsp. malaccensis]
Length = 380
Score = 93.2 bits (230), Expect = 9e-17
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGR 1635
E F+ HF KYGEI D VIMKDKNT MPRGFGFVTFA PSVIDKVLE EH+IDGR
Sbjct: 111 ETFNEHFSKYGEITDSVIMKDKNTHMPRGFGFVTFADPSVIDKVLEDEHVIDGR 164
>ref|XP_009380446.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Musa
acuminata subsp. malaccensis]
Length = 374
Score = 92.4 bits (228), Expect = 2e-16
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
+ F+ HF KYGEIID VIMKDKNT MPRGFGFVTFA PSVID+V E EH+IDGRT
Sbjct: 106 DTFNKHFSKYGEIIDSVIMKDKNTHMPRGFGFVTFADPSVIDRVWEDEHVIDGRT 160
>ref|XP_020573784.1| heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Phalaenopsis equestris]
Length = 376
Score = 92.4 bits (228), Expect = 2e-16
Identities = 43/54 (79%), Positives = 47/54 (87%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGR 1635
E F+NHF KYGEI D VIMKDK+T+MPRGFGF+TFA PSVIDKVLE EH IDGR
Sbjct: 100 ETFTNHFAKYGEITDSVIMKDKHTQMPRGFGFITFADPSVIDKVLEEEHSIDGR 153
>gb|AQK59718.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
gb|AQK59725.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
Length = 359
Score = 91.7 bits (226), Expect = 2e-16
Identities = 44/63 (69%), Positives = 51/63 (80%)
Frame = +1
Query: 1450 FMCHLIVAERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIID 1629
F+C + E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE +H+ID
Sbjct: 38 FIC--LYVESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVID 95
Query: 1630 GRT 1638
GRT
Sbjct: 96 GRT 98
>ref|XP_010925454.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Elaeis
guineensis]
ref|XP_010925455.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Elaeis
guineensis]
Length = 372
Score = 91.3 bits (225), Expect = 4e-16
Identities = 44/55 (80%), Positives = 46/55 (83%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E F+ HF KYGEI D VIMKDK+T MPRGFGFVTFA PSVIDKVLE EH IDGRT
Sbjct: 105 ETFTRHFEKYGEITDSVIMKDKHTHMPRGFGFVTFADPSVIDKVLEDEHAIDGRT 159
>dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 91.3 bits (225), Expect = 4e-16
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE EH+IDGRT
Sbjct: 80 ESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRT 134
>ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gb|ACN30574.1| unknown [Zea mays]
gb|AQK70523.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
gb|AQK70524.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
gb|AQK70526.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
gb|AQK70527.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
Length = 384
Score = 91.3 bits (225), Expect = 4e-16
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE EH+IDGRT
Sbjct: 69 ESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRT 123
>ref|XP_015689436.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Oryza brachyantha]
Length = 386
Score = 91.3 bits (225), Expect = 4e-16
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE EH+IDGRT
Sbjct: 70 ESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRT 124
>gb|PAN04785.1| hypothetical protein PAHAL_A00871 [Panicum hallii]
gb|PAN04786.1| hypothetical protein PAHAL_A00871 [Panicum hallii]
Length = 393
Score = 91.3 bits (225), Expect = 5e-16
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE EH+IDGRT
Sbjct: 70 ETFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRT 124
>ref|XP_004951463.1| glycine-rich RNA-binding protein 3, mitochondrial [Setaria italica]
Length = 393
Score = 91.3 bits (225), Expect = 5e-16
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE EH+IDGRT
Sbjct: 70 ETFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRT 124
>ref|XP_015626578.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial [Oryza
sativa Japonica Group]
dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
dbj|BAS77706.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 91.3 bits (225), Expect = 5e-16
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE EH+IDGRT
Sbjct: 80 ESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRT 134
>gb|AQK59726.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
Length = 549
Score = 91.7 bits (226), Expect = 8e-16
Identities = 44/63 (69%), Positives = 51/63 (80%)
Frame = +1
Query: 1450 FMCHLIVAERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIID 1629
F+C + E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE +H+ID
Sbjct: 228 FIC--LYVESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVID 285
Query: 1630 GRT 1638
GRT
Sbjct: 286 GRT 288
>ref|XP_008676544.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform X2 [Zea mays]
ref|XP_008676545.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform X2 [Zea mays]
gb|ACR34605.1| unknown [Zea mays]
Length = 366
Score = 90.1 bits (222), Expect = 8e-16
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE +H+IDGRT
Sbjct: 51 ESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRT 105
>gb|PKA63629.1| Heterogeneous nuclear ribonucleoprotein 1 [Apostasia shenzhenica]
Length = 376
Score = 90.1 bits (222), Expect = 9e-16
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGR 1635
E F+NHF KYG+IID V+MKDK T+ PRGFGFVTFA PSVIDKVLE EH+IDGR
Sbjct: 96 ETFNNHFAKYGKIIDSVVMKDKLTQKPRGFGFVTFADPSVIDKVLEDEHLIDGR 149
>gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 91.3 bits (225), Expect = 9e-16
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE EH+IDGRT
Sbjct: 189 ESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRT 243
>gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 91.3 bits (225), Expect = 1e-15
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE EH+IDGRT
Sbjct: 193 ESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRT 247
>gb|PAN23658.1| hypothetical protein PAHAL_J01619 [Panicum hallii]
Length = 331
Score = 89.4 bits (220), Expect = 1e-15
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +1
Query: 1465 IVAERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
+ AE F+ HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVID+VLE EH+IDGR+
Sbjct: 30 LFAETFTKHFQKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDRVLEDEHVIDGRS 87
>gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 90.1 bits (222), Expect = 1e-15
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE +H+IDGRT
Sbjct: 69 ESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRT 123
>ref|NP_001131946.2| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
ref|XP_008676542.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform X1 [Zea mays]
ref|XP_008676543.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform X1 [Zea mays]
gb|ACF81591.1| unknown [Zea mays]
gb|ACN27926.1| unknown [Zea mays]
gb|ACF80580.2| unknown [Zea mays]
gb|AQK59717.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
gb|AQK59719.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
gb|AQK59720.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
gb|AQK59723.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
gb|AQK59724.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
Length = 384
Score = 90.1 bits (222), Expect = 1e-15
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +1
Query: 1474 ERFSNHFIKYGEIIDCVIMKDKNTRMPRGFGFVTFAHPSVIDKVLEVEHIIDGRT 1638
E FS HF KYG I D VIMKDK+T+MPRGFGFVTF+ PSVIDKVLE +H+IDGRT
Sbjct: 69 ESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRT 123