BLASTX nr result

ID: Cheilocostus21_contig00033978 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00033978
         (571 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAO50902.1| putative uncharacterized protein (mitochondrion)...    65   4e-16
ref|YP_008992371.1| hypothetical protein Salmi_Mp105 (mitochondr...    69   7e-12
ref|YP_173496.1| hypothetical protein NitaMp159 [Nicotiana tabac...    61   3e-09

>dbj|BAO50902.1| putative uncharacterized protein (mitochondrion) [Hevea
           brasiliensis]
          Length = 129

 Score = 65.1 bits (157), Expect(2) = 4e-16
 Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
 Frame = +1

Query: 103 MDRLITDYIVSRLLP--LALIVAFRAGRIVHYFNALNLEGKVDELSITLLKEQIVYQLKL 276
           MD L++ Y+ S  L   +AL+VAFRAG+     NA+N E KV++L+I  LKEQIV ++++
Sbjct: 1   MDLLVSQYVFSLALSFSIALLVAFRAGQ-ARDVNAINFEEKVNDLTIATLKEQIVSKIEI 59

Query: 277 IYTVYKDTTDVHFHLPPGIH 336
           ++ VYKDTT    +LP G++
Sbjct: 60  LFRVYKDTTG-DVNLPTGVN 78



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = +3

Query: 375 LNEIYFSLLNQGTQSPHFVQALSCVLSLGGV 467
           LN+IY  L+NQGTQSPHF QAL  VL  GG+
Sbjct: 96  LNQIYLELVNQGTQSPHFAQALDYVLHFGGM 126


>ref|YP_008992371.1| hypothetical protein Salmi_Mp105 (mitochondrion) [Salvia
           miltiorrhiza]
 gb|AGU16633.1| hypothetical protein Salmi_Mp105 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 103

 Score = 68.9 bits (167), Expect = 7e-12
 Identities = 37/84 (44%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
 Frame = +1

Query: 103 MDRLITDYIVSRL---LPLALIVAFRAGRIVHYFNALNLEGKVDELSITLLKEQIVYQLK 273
           M++LI D+ VSR+   LP+A++VA RAGR++H  N+L++E ++ E++  +LK++IV QL 
Sbjct: 1   MEQLIADF-VSRMGLALPVAILVAVRAGRMIHQMNSLHIEPQITEVTRGVLKDKIVDQLS 59

Query: 274 LIYTVYKDTTDVHFHLPPGIHLDQ 345
           ++  VYKDTT+    LP G++L +
Sbjct: 60  ILLRVYKDTTE-GVSLPTGVNLQE 82


>ref|YP_173496.1| hypothetical protein NitaMp159 [Nicotiana tabacum]
 dbj|BAD83562.1| hypothetical protein (mitochondrion) [Nicotiana tabacum]
          Length = 121

 Score = 60.8 bits (146), Expect(2) = 3e-09
 Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
 Frame = +1

Query: 103 MDRLITDYIVSR--LLPLALIVAFRAGRIVHYFNALNLEGKVDELSITLLKEQIVYQLKL 276
           MD LI++YI S    L +AL+VAFRAG+     N++N+  K+++L+I  LKE+IV ++++
Sbjct: 1   MDLLISEYITSLGLTLSIALLVAFRAGQ-ARNLNSINMGNKLNQLTIDTLKERIVSKVEM 59

Query: 277 IYTVYKDTT-DVHFHLPP 327
           +  VYK+TT  + F LPP
Sbjct: 60  LVRVYKETTPGLDFELPP 77



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 375 LNEIYFSLLNQGTQSPHFVQALSCVL 452
           LN +Y SL+  GTQ  +F+Q +   L
Sbjct: 95  LNSLYTSLIENGTQGEYFIQVIQFFL 120


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