BLASTX nr result
ID: Cheilocostus21_contig00033891
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00033891
(664 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AIZ68164.1| pentatricopeptide repeat-containing protein At1g6... 59 1e-11
ref|XP_008801961.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-11
ref|XP_010925090.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-11
ref|XP_010924205.1| PREDICTED: pentatricopeptide repeat-containi... 57 6e-11
ref|XP_009400074.1| PREDICTED: pentatricopeptide repeat-containi... 61 2e-10
ref|XP_020241492.1| pentatricopeptide repeat-containing protein ... 55 4e-10
ref|XP_008800895.1| PREDICTED: pentatricopeptide repeat-containi... 54 4e-10
ref|XP_020693632.1| pentatricopeptide repeat-containing protein ... 52 1e-09
ref|XP_020586889.1| pentatricopeptide repeat-containing protein ... 52 6e-09
gb|OAY80422.1| Pentatricopeptide repeat-containing protein [Anan... 54 8e-09
gb|PKA46217.1| Pentatricopeptide repeat-containing protein [Apos... 50 2e-08
ref|XP_020113272.1| pentatricopeptide repeat-containing protein ... 50 1e-07
gb|OMO78303.1| hypothetical protein CCACVL1_14502 [Corchorus cap... 47 7e-07
ref|XP_020199076.1| pentatricopeptide repeat-containing protein ... 50 1e-06
gb|OEL35003.1| Pentatricopeptide repeat-containing protein [Dich... 47 1e-06
ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi... 49 2e-06
emb|CBI23460.3| unnamed protein product, partial [Vitis vinifera] 49 2e-06
ref|XP_006653269.2| PREDICTED: pentatricopeptide repeat-containi... 46 2e-06
ref|XP_006381714.1| pentatricopeptide repeat-containing family p... 47 2e-06
ref|XP_002436399.1| pentatricopeptide repeat-containing protein ... 46 3e-06
>gb|AIZ68164.1| pentatricopeptide repeat-containing protein At1g60770-like isoform
X1 [Ornithogalum longebracteatum]
Length = 491
Score = 58.5 bits (140), Expect(2) = 1e-11
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = -1
Query: 622 MATATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
MA+ TRTK++ KRS+KYL+EALY RLFREG SP+SVR+
Sbjct: 1 MASLTRTKLITKRSSKYLEEALYKRLFREGSSPESVRK 38
Score = 39.3 bits (90), Expect(2) = 1e-11
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -2
Query: 417 DFLKSRKRAFKWEVGVSI*K 358
DFLKSRKR FKWEVGVSI K
Sbjct: 42 DFLKSRKRVFKWEVGVSIKK 61
>ref|XP_008801961.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Phoenix dactylifera]
Length = 485
Score = 58.2 bits (139), Expect(2) = 1e-11
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = -1
Query: 613 ATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
ATRTK+VAKRS+KYL+EALY RLFR+G SP SVRQ
Sbjct: 2 ATRTKLVAKRSSKYLEEALYRRLFRQGSSPASVRQ 36
Score = 39.3 bits (90), Expect(2) = 1e-11
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -2
Query: 417 DFLKSRKRAFKWEVGVSI*K 358
DFLKSRKR FKWEVGVSI K
Sbjct: 40 DFLKSRKRVFKWEVGVSIRK 59
>ref|XP_010925090.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Elaeis guineensis]
Length = 486
Score = 57.4 bits (137), Expect(2) = 3e-11
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = -1
Query: 613 ATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
ATRTK+VAKRS+KYL+EALY RLFR+G SP SVRQ
Sbjct: 2 ATRTKLVAKRSSKYLEEALYKRLFRQGSSPGSVRQ 36
Score = 39.3 bits (90), Expect(2) = 3e-11
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -2
Query: 417 DFLKSRKRAFKWEVGVSI*K 358
DFLKSRKR FKWEVGVSI K
Sbjct: 40 DFLKSRKRVFKWEVGVSIRK 59
>ref|XP_010924205.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like isoform X1 [Elaeis guineensis]
Length = 485
Score = 57.4 bits (137), Expect(2) = 6e-11
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = -1
Query: 613 ATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
ATRTK+VAKRS+KYL++ALY RLFREG SP+SVR+
Sbjct: 2 ATRTKLVAKRSSKYLEDALYKRLFREGSSPESVRR 36
Score = 38.1 bits (87), Expect(2) = 6e-11
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2
Query: 417 DFLKSRKRAFKWEVGVSI*K 358
DFLKSRKR FKWEVGV+I K
Sbjct: 40 DFLKSRKRVFKWEVGVTIRK 59
>ref|XP_009400074.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Musa acuminata subsp. malaccensis]
Length = 487
Score = 60.8 bits (146), Expect(2) = 2e-10
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -1
Query: 622 MATATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
MATAT TK+VAKRS+KYL+E LY RLFREG PQSVRQ
Sbjct: 1 MATATGTKLVAKRSSKYLEEPLYKRLFREGTKPQSVRQ 38
Score = 32.7 bits (73), Expect(2) = 2e-10
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2
Query: 414 FLKSRKRAFKWEVGVSI 364
FLKSRKR +KWEV VSI
Sbjct: 43 FLKSRKRVYKWEVDVSI 59
>ref|XP_020241492.1| pentatricopeptide repeat-containing protein At1g60770 [Asparagus
officinalis]
gb|ONK59223.1| uncharacterized protein A4U43_C08F4240 [Asparagus officinalis]
Length = 490
Score = 55.5 bits (132), Expect(2) = 4e-10
Identities = 25/37 (67%), Positives = 33/37 (89%)
Frame = -1
Query: 619 ATATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
A +TRTK++ KRS+KYL+EALY RLFREG SP+SV++
Sbjct: 5 AMSTRTKLITKRSSKYLEEALYKRLFREGSSPESVKK 41
Score = 37.0 bits (84), Expect(2) = 4e-10
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -2
Query: 414 FLKSRKRAFKWEVGVSI*K 358
FLKSRKR FKWEVGVSI K
Sbjct: 46 FLKSRKRVFKWEVGVSIKK 64
>ref|XP_008800895.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Phoenix dactylifera]
Length = 485
Score = 54.3 bits (129), Expect(2) = 4e-10
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = -1
Query: 613 ATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
ATRTK+VAKRS+KYL+EALY RLFREG S SVR+
Sbjct: 2 ATRTKLVAKRSSKYLEEALYKRLFREGSSTASVRR 36
Score = 38.1 bits (87), Expect(2) = 4e-10
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2
Query: 417 DFLKSRKRAFKWEVGVSI*K 358
DFLKSRKR FKWEVGV+I K
Sbjct: 40 DFLKSRKRVFKWEVGVTIRK 59
>ref|XP_020693632.1| pentatricopeptide repeat-containing protein At1g60770 isoform X1
[Dendrobium catenatum]
Length = 485
Score = 51.6 bits (122), Expect(2) = 1e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = -1
Query: 610 TRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
T T+++AKRS+KYL+EALY RLFREG SP S+R+
Sbjct: 3 TATRLIAKRSSKYLEEALYKRLFREGSSPPSIRK 36
Score = 39.7 bits (91), Expect(2) = 1e-09
Identities = 20/28 (71%), Positives = 23/28 (82%), Gaps = 3/28 (10%)
Frame = -2
Query: 432 PTIRKD---FLKSRKRAFKWEVGVSI*K 358
P+IRK+ FLKSRKR FKWEVG+SI K
Sbjct: 32 PSIRKELTLFLKSRKRVFKWEVGLSIRK 59
>ref|XP_020586889.1| pentatricopeptide repeat-containing protein At5g65560-like
[Phalaenopsis equestris]
Length = 1593
Score = 51.6 bits (122), Expect(2) = 6e-09
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = -1
Query: 613 ATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
AT T+++AKRS+KYL+EALY RLFREG SP S+R+
Sbjct: 1110 ATATRLMAKRSSKYLEEALYTRLFREGSSPLSIRK 1144
Score = 37.0 bits (84), Expect(2) = 6e-09
Identities = 19/27 (70%), Positives = 22/27 (81%), Gaps = 3/27 (11%)
Frame = -2
Query: 429 TIRKD---FLKSRKRAFKWEVGVSI*K 358
+IRK+ FLKSRKR FKWEVG+SI K
Sbjct: 1141 SIRKELTLFLKSRKRVFKWEVGLSIRK 1167
>gb|OAY80422.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 489
Score = 53.5 bits (127), Expect(2) = 8e-09
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = -1
Query: 616 TATRTKVVAKRSNKYLKEALYHRLFREGISPQSVR 512
T TRTK VAKRS+KYL+EALY RLFR G S QSVR
Sbjct: 5 TRTRTKTVAKRSSKYLEEALYRRLFRGGSSKQSVR 39
Score = 34.7 bits (78), Expect(2) = 8e-09
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -2
Query: 420 KDFLKSRKRAFKWEVGVSI*K 358
+ FL SRKR FKWEVGVS+ K
Sbjct: 43 ESFLDSRKRVFKWEVGVSVRK 63
>gb|PKA46217.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 485
Score = 49.7 bits (117), Expect(2) = 2e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -1
Query: 613 ATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
A RTK++AKRS+KYL+ ALY RLFREG +P VR+
Sbjct: 2 AARTKLIAKRSSKYLEGALYRRLFREGSAPARVRK 36
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 3/26 (11%)
Frame = -2
Query: 426 IRKD---FLKSRKRAFKWEVGVSI*K 358
+RK+ FLKSRKR FKWEVGVS+ K
Sbjct: 34 VRKELTLFLKSRKRVFKWEVGVSVRK 59
>ref|XP_020113272.1| pentatricopeptide repeat-containing protein At1g60770, partial
[Ananas comosus]
Length = 555
Score = 49.7 bits (117), Expect(2) = 1e-07
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -1
Query: 625 GMATATRTKVVAKRSNKYLKEALYHRLFREGISPQSVR 512
G+ TK VAKRS+KYL+EALY RLFR G S QSVR
Sbjct: 68 GLTGGVGTKTVAKRSSKYLEEALYRRLFRGGSSKQSVR 105
Score = 34.7 bits (78), Expect(2) = 1e-07
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -2
Query: 420 KDFLKSRKRAFKWEVGVSI*K 358
+ FL SRKR FKWEVGVS+ K
Sbjct: 109 ESFLDSRKRVFKWEVGVSVRK 129
>gb|OMO78303.1| hypothetical protein CCACVL1_14502 [Corchorus capsularis]
Length = 491
Score = 47.4 bits (111), Expect(2) = 7e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -1
Query: 607 RTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
RTK V KRS KYL+EALY RLF+EG S SVRQ
Sbjct: 9 RTKNVTKRSKKYLEEALYRRLFKEGSSEISVRQ 41
Score = 34.3 bits (77), Expect(2) = 7e-07
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = -2
Query: 417 DFLKSRKRAFKWEVGVSI*KSYVLKDVPSRSQGYPSNPNLSFSSISVIK 271
+FLKS KR +KWEV V+ LK + R YP+ L S I VIK
Sbjct: 45 EFLKSSKRVYKWEVDVT------LKKLRDRKLYYPA---LKLSEIMVIK 84
>ref|XP_020199076.1| pentatricopeptide repeat-containing protein At1g60770 [Aegilops
tauschii subsp. tauschii]
Length = 537
Score = 49.7 bits (117), Expect(2) = 1e-06
Identities = 25/39 (64%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Frame = -1
Query: 622 MATATRTKVVAKRS-NKYLKEALYHRLFREGISPQSVRQ 509
MATATR K +A+RS KY++EALY RLFR G +PQ+VR+
Sbjct: 1 MATATRAKDLARRSPKKYVEEALYRRLFRRGSTPQAVRE 39
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 414 FLKSRKRAFKWEVGVSI 364
FL SRKRAFKWEV V +
Sbjct: 44 FLGSRKRAFKWEVAVCV 60
>gb|OEL35003.1| Pentatricopeptide repeat-containing protein [Dichanthelium
oligosanthes]
Length = 531
Score = 47.0 bits (110), Expect(2) = 1e-06
Identities = 24/36 (66%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = -1
Query: 613 ATRTKVVAKRSNK-YLKEALYHRLFREGISPQSVRQ 509
ATR K VAKRS K Y++EALY RLFR+G +PQ+VR+
Sbjct: 2 ATRVKDVAKRSTKKYVEEALYRRLFRKGSTPQAVRE 37
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2
Query: 414 FLKSRKRAFKWEVGVSI 364
FL SRKRAFKWEVGV +
Sbjct: 42 FLDSRKRAFKWEVGVCV 58
>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
isoform X1 [Vitis vinifera]
Length = 489
Score = 48.5 bits (114), Expect(2) = 2e-06
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = -1
Query: 622 MATATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
M +RTK +AKRS KYL+EALY RLF++G S SVRQ
Sbjct: 3 MPQLSRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQ 40
Score = 31.6 bits (70), Expect(2) = 2e-06
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 414 FLKSRKRAFKWEVGVSI*KSYVLKDVPSRSQGYPS 310
FLKS KR FKWEVG ++ K + R + YP+
Sbjct: 45 FLKSSKRVFKWEVGDTV------KKLRDRKRFYPA 73
>emb|CBI23460.3| unnamed protein product, partial [Vitis vinifera]
Length = 444
Score = 48.5 bits (114), Expect(2) = 2e-06
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = -1
Query: 622 MATATRTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
M +RTK +AKRS KYL+EALY RLF++G S SVRQ
Sbjct: 3 MPQLSRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQ 40
Score = 31.6 bits (70), Expect(2) = 2e-06
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 414 FLKSRKRAFKWEVGVSI*KSYVLKDVPSRSQGYPS 310
FLKS KR FKWEVG ++ K + R + YP+
Sbjct: 45 FLKSSKRVFKWEVGDTV------KKLRDRKRFYPA 73
>ref|XP_006653269.2| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Oryza brachyantha]
Length = 525
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 23/36 (63%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = -1
Query: 613 ATRTKVVAKRSNK-YLKEALYHRLFREGISPQSVRQ 509
ATR K VA+RS+K Y++EALY RLFR G +PQ+VR+
Sbjct: 2 ATRVKDVARRSSKKYIEEALYRRLFRRGSTPQAVRE 37
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2
Query: 414 FLKSRKRAFKWEVGVSI 364
FL SRKRAFKWEVGV +
Sbjct: 42 FLDSRKRAFKWEVGVCV 58
>ref|XP_006381714.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa]
gb|ABK95769.1| unknown [Populus trichocarpa]
gb|PNT31937.1| hypothetical protein POPTR_006G157400v3 [Populus trichocarpa]
gb|PNT31938.1| hypothetical protein POPTR_006G157400v3 [Populus trichocarpa]
gb|PNT31972.1| hypothetical protein POPTR_006G159700v3 [Populus trichocarpa]
Length = 490
Score = 47.0 bits (110), Expect(2) = 2e-06
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -1
Query: 607 RTKVVAKRSNKYLKEALYHRLFREGISPQSVRQ 509
RTK V KRS KYL+EALY RLF+EG S SVRQ
Sbjct: 9 RTKSVTKRSKKYLEEALYVRLFKEGSSEVSVRQ 41
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -2
Query: 414 FLKSRKRAFKWEVGVSI*KSYVLKDVPSRSQGYPS 310
FLKS KR FKWEVG +I K + SR+ YP+
Sbjct: 46 FLKSSKRVFKWEVGDTI------KKLRSRNLYYPA 74
>ref|XP_002436399.1| pentatricopeptide repeat-containing protein At1g60770 [Sorghum
bicolor]
ref|XP_021305139.1| pentatricopeptide repeat-containing protein At1g60770 [Sorghum
bicolor]
gb|EER87766.1| hypothetical protein SORBI_3010G018900 [Sorghum bicolor]
gb|EER89115.2| hypothetical protein SORBI_3010G018900 [Sorghum bicolor]
Length = 536
Score = 45.8 bits (107), Expect(2) = 3e-06
Identities = 23/36 (63%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = -1
Query: 613 ATRTKVVAKRSNK-YLKEALYHRLFREGISPQSVRQ 509
ATR K VA+RS K Y++EALY RLFR+G +PQ+VR+
Sbjct: 2 ATRVKDVARRSTKKYVEEALYRRLFRKGSTPQAVRE 37
Score = 33.5 bits (75), Expect(2) = 3e-06
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2
Query: 414 FLKSRKRAFKWEVGVSI 364
FL SRKRAFKWEVGV +
Sbjct: 42 FLDSRKRAFKWEVGVCV 58