BLASTX nr result

ID: Cheilocostus21_contig00033805 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00033805
         (587 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OVA08633.1| hypothetical protein BVC80_1619g20 [Macleaya cord...    63   5e-09

>gb|OVA08633.1| hypothetical protein BVC80_1619g20 [Macleaya cordata]
          Length = 171

 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 26/113 (23%)
 Frame = +1

Query: 298 SRCEGLDLLVLAVIQVFGD-------------RALEVEHIGSNGVRDKEGKQERIEKRVE 438
           +RCEGLDLLV AV+ V G              R        ++ V +   K+E  E   E
Sbjct: 49  TRCEGLDLLVKAVLHVAGSVLVVPFTQRRVIRRRKRAFRFCNSFVTEFGEKKEEREDEQE 108

Query: 439 EPDDGVEAGREK-------------KRRTRQLAVPSRYHDSVLQPWKRRTQRR 558
           +  +  E G EK             K+R R +A+P++YHDSVLQPW RRT+RR
Sbjct: 109 QEQEEREKGEEKQMKGERIEVISKPKKRKRVMALPTKYHDSVLQPWIRRTRRR 161


Top