BLASTX nr result
ID: Cheilocostus21_contig00033762
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00033762
(1025 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009393319.1| PREDICTED: translation initiation factor IF-... 64 1e-14
ref|XP_010941522.1| PREDICTED: translation initiation factor IF-... 58 3e-12
ref|XP_008787640.1| PREDICTED: translation initiation factor IF-... 50 1e-11
ref|XP_009412025.1| PREDICTED: translation initiation factor IF-... 54 1e-11
ref|XP_010921937.1| PREDICTED: translation initiation factor IF-... 51 4e-11
ref|XP_010921938.1| PREDICTED: translation initiation factor IF-... 51 4e-11
ref|XP_010921939.1| PREDICTED: translation initiation factor IF-... 51 4e-11
ref|XP_008775701.1| PREDICTED: translation initiation factor IF-... 49 3e-10
ref|XP_008775702.1| PREDICTED: translation initiation factor IF-... 49 3e-10
>ref|XP_009393319.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
[Musa acuminata subsp. malaccensis]
Length = 1006
Score = 64.3 bits (155), Expect(2) = 1e-14
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +2
Query: 695 NRDSAFWSSDTAIREKPAS--KDRAKVIESQREVLGKLEGLEITKAVMFNG-DLRDRGVS 865
N S+ WSSD A+REKPA+ +D +++ES EVL K+E LE AV F G D+RD GVS
Sbjct: 118 NSASSNWSSDKAVREKPAAPMEDGEEMMESLGEVLDKVEKLETANAVKFGGKDIRDTGVS 177
Query: 866 NRSSKAFRNEVPSPAINNKK 925
N SSK+ R + A N K
Sbjct: 178 NGSSKSGRPANATLATRNSK 197
Score = 45.1 bits (105), Expect(2) = 1e-14
Identities = 43/121 (35%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +3
Query: 351 MTYPASLATSGSARTVALVA-FERSPPIXXXXXXXXXSAARFNAIGCTRRWSRARRLYLQ 527
M PASLA+ GSAR V+ FE S S+ RF++ + +W AR + +
Sbjct: 1 MASPASLASLGSARPVSSPGVFEVSSSAVTVRRIHVVSSIRFSSFYGSMQWRVARGRFCK 60
Query: 528 LYGGRVANL-NERGIPESRLTTS*YXXXXXXXXXX--LILMPAPKPVL*ASPNGAVGSST 698
NL ERGIP S +T LIL P PKPVL A PNG + S
Sbjct: 61 CMV--TTNLIEERGIPVSSESTFKVSNSSVSRNDDADLILKPPPKPVLRAPPNGQLDPSN 118
Query: 699 A 701
+
Sbjct: 119 S 119
>ref|XP_010941522.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
[Elaeis guineensis]
Length = 1009
Score = 57.8 bits (138), Expect(2) = 3e-12
Identities = 42/117 (35%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Frame = +3
Query: 351 MTYPASLATSGSARTVALVAFERSPPIXXXXXXXXXSAARFNAIGCTRRWSRARRLYLQL 530
M+ P+S AT GS R L FE SP S F +G RRWSRA
Sbjct: 1 MSSPSSFATLGSVRPNPLAVFEVSPLPAAVRRIHIISRVSFGGVGSARRWSRA------- 53
Query: 531 YGGRVAN-------LNERGIPESRLTTS*YXXXXXXXXXXLILMPAPKPVL*ASPNG 680
GRV + + E+GIP S +T L+L P+PKP L A PNG
Sbjct: 54 -PGRVCSCLVTTDLIEEKGIPVSPESTFRGSSGSREDDADLVLKPSPKPALKAQPNG 109
Score = 43.1 bits (100), Expect(2) = 3e-12
Identities = 30/67 (44%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 701 DSAFWSSDTAIREKP---ASKDRAKVIESQREVLGKLEGLEITKAVMFNG-DLRDRGVSN 868
+SA WS D R+K +DR KVIES EVL K E LEI K G + R SN
Sbjct: 115 NSALWSPDKVGRDKRPGITEEDREKVIESLGEVLEKAENLEIVKPGSLGGNEFRGNNKSN 174
Query: 869 RSSKAFR 889
SS+ R
Sbjct: 175 GSSRRSR 181
>ref|XP_008787640.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
[Phoenix dactylifera]
Length = 1008
Score = 50.1 bits (118), Expect(2) = 1e-11
Identities = 43/125 (34%), Positives = 52/125 (41%), Gaps = 7/125 (5%)
Frame = +3
Query: 351 MTYPASLATSGSARTVALVAFERSPPIXXXXXXXXXSAARFNAIGCTRRWSRARRLYLQL 530
MT PASLAT GS R FE S S F ++G +RWSRA
Sbjct: 1 MTSPASLATLGSVRPNPSAVFEISALPVAVRRIRIISRISFGSVGGVQRWSRA------- 53
Query: 531 YGGRVAN-------LNERGIPESRLTTS*YXXXXXXXXXXLILMPAPKPVL*ASPNGAVG 689
GRV + E+GIP S +T L L P PKPVL A NG
Sbjct: 54 -PGRVCRCLVTTDLIEEKGIPFSSESTFRGSSGSKEDDTDLALKPPPKPVLKARLNGPAP 112
Query: 690 SSTAI 704
++A+
Sbjct: 113 VNSAL 117
Score = 49.3 bits (116), Expect(2) = 1e-11
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +2
Query: 701 DSAFWSSDTAIREK---PASKDRAKVIESQREVLGKLEGLEITKAVMFNG-DLRDRGVSN 868
+SA WS D + +K +DR KVIES EVL K E LEI K V +G ++R G S+
Sbjct: 114 NSALWSPDKVVHDKRPETRDEDREKVIESLGEVLDKAEKLEIAKTVKLDGKEIRGSGKSD 173
Query: 869 RSSKAFRN-EVPSPAINNKKLR 931
SS+ R SP +K L+
Sbjct: 174 GSSRPSRPVNTTSPTRKSKTLK 195
>ref|XP_009412025.1| PREDICTED: translation initiation factor IF-2, chloroplastic [Musa
acuminata subsp. malaccensis]
Length = 1005
Score = 54.3 bits (129), Expect(2) = 1e-11
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Frame = +2
Query: 695 NRDSAFWSSDTAIREKP--ASKDRAKVIESQREVLGKLEGLEITKAVMFNG-DLRDRGVS 865
N S+ WSSD +REKP A +D KVIES EVL K+E LE T A+ F G D++ G
Sbjct: 117 NSGSSIWSSDMVVREKPMAAVEDTEKVIESLGEVLEKVEKLETTNALKFGGKDIKGNGAP 176
Query: 866 NRSSK 880
+ SK
Sbjct: 177 SGGSK 181
Score = 45.1 bits (105), Expect(2) = 1e-11
Identities = 43/127 (33%), Positives = 52/127 (40%), Gaps = 10/127 (7%)
Frame = +3
Query: 351 MTYPASLATSGSARTVALVAFERSPPIXXXXXXXXXSAARFNAIGCTRRWSRARRLYLQL 530
M PASLA+ GSAR+V+ FE P + S+ R ++W R R
Sbjct: 1 MASPASLASLGSARSVSPGVFEVFPSVVAVRRVHVVSSIRVGGFDGWKKWRRVR------ 54
Query: 531 YGGRVAN-------LNERGIP---ESRLTTS*YXXXXXXXXXXLILMPAPKPVL*ASPNG 680
GRV + ER IP ES L S LIL P KPVL PNG
Sbjct: 55 --GRVCKCMVTTNLVEEREIPFSAESTLKVS-NSSGGRNDDADLILKPPSKPVLKPLPNG 111
Query: 681 AVGSSTA 701
V S +
Sbjct: 112 QVDPSNS 118
>ref|XP_010921937.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
isoform X1 [Elaeis guineensis]
Length = 1007
Score = 50.8 bits (120), Expect(2) = 4e-11
Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Frame = +3
Query: 351 MTYPASLATSGSARTVALVAFERSPPIXXXXXXXXXSAARFNAIGCTRRWSRARRLYLQL 530
M PASLAT GS RT + FE SP S F ++G +R SR+
Sbjct: 1 MASPASLATLGSVRTNSSTVFEVSPSPGAVRRIRIISRISFRSVGGVQRRSRS------- 53
Query: 531 YGGRVAN-------LNERGIPESRLTTS*YXXXXXXXXXXLILMPAPKPVL*ASPNG 680
GRV + E+GIP S +T L+L P PKPV A PNG
Sbjct: 54 -PGRVCRCLVTTDLIEEKGIPFSSESTYRGSSGSREDDADLVLKPPPKPVSKAQPNG 109
Score = 46.6 bits (109), Expect(2) = 4e-11
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +2
Query: 701 DSAFWSSDTAIREK---PASKDRAKVIESQREVLGKLEGLEITKAVMFNG-DLRDRGVSN 868
+SA WS D + +K +DR K+IES EVL K E LE K V +G ++R G S+
Sbjct: 114 NSALWSPDKVVHDKMLETGQEDRDKMIESLGEVLEKAEKLETAKRVKLDGKEIRGNGKSS 173
Query: 869 RSSKAFRNEVPSPAINNK 922
SS+ R SP +K
Sbjct: 174 GSSRPSRPVNTSPTRKSK 191
>ref|XP_010921938.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
isoform X2 [Elaeis guineensis]
Length = 957
Score = 50.8 bits (120), Expect(2) = 4e-11
Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Frame = +3
Query: 351 MTYPASLATSGSARTVALVAFERSPPIXXXXXXXXXSAARFNAIGCTRRWSRARRLYLQL 530
M PASLAT GS RT + FE SP S F ++G +R SR+
Sbjct: 1 MASPASLATLGSVRTNSSTVFEVSPSPGAVRRIRIISRISFRSVGGVQRRSRS------- 53
Query: 531 YGGRVAN-------LNERGIPESRLTTS*YXXXXXXXXXXLILMPAPKPVL*ASPNG 680
GRV + E+GIP S +T L+L P PKPV A PNG
Sbjct: 54 -PGRVCRCLVTTDLIEEKGIPFSSESTYRGSSGSREDDADLVLKPPPKPVSKAQPNG 109
Score = 46.6 bits (109), Expect(2) = 4e-11
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +2
Query: 701 DSAFWSSDTAIREK---PASKDRAKVIESQREVLGKLEGLEITKAVMFNG-DLRDRGVSN 868
+SA WS D + +K +DR K+IES EVL K E LE K V +G ++R G S+
Sbjct: 114 NSALWSPDKVVHDKMLETGQEDRDKMIESLGEVLEKAEKLETAKRVKLDGKEIRGNGKSS 173
Query: 869 RSSKAFRNEVPSPAINNK 922
SS+ R SP +K
Sbjct: 174 GSSRPSRPVNTSPTRKSK 191
>ref|XP_010921939.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
isoform X3 [Elaeis guineensis]
Length = 852
Score = 50.8 bits (120), Expect(2) = 4e-11
Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Frame = +3
Query: 351 MTYPASLATSGSARTVALVAFERSPPIXXXXXXXXXSAARFNAIGCTRRWSRARRLYLQL 530
M PASLAT GS RT + FE SP S F ++G +R SR+
Sbjct: 1 MASPASLATLGSVRTNSSTVFEVSPSPGAVRRIRIISRISFRSVGGVQRRSRS------- 53
Query: 531 YGGRVAN-------LNERGIPESRLTTS*YXXXXXXXXXXLILMPAPKPVL*ASPNG 680
GRV + E+GIP S +T L+L P PKPV A PNG
Sbjct: 54 -PGRVCRCLVTTDLIEEKGIPFSSESTYRGSSGSREDDADLVLKPPPKPVSKAQPNG 109
Score = 46.6 bits (109), Expect(2) = 4e-11
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +2
Query: 701 DSAFWSSDTAIREK---PASKDRAKVIESQREVLGKLEGLEITKAVMFNG-DLRDRGVSN 868
+SA WS D + +K +DR K+IES EVL K E LE K V +G ++R G S+
Sbjct: 114 NSALWSPDKVVHDKMLETGQEDRDKMIESLGEVLEKAEKLETAKRVKLDGKEIRGNGKSS 173
Query: 869 RSSKAFRNEVPSPAINNK 922
SS+ R SP +K
Sbjct: 174 GSSRPSRPVNTSPTRKSK 191
>ref|XP_008775701.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
isoform X1 [Phoenix dactylifera]
Length = 1006
Score = 48.5 bits (114), Expect(2) = 3e-10
Identities = 39/116 (33%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Frame = +3
Query: 351 MTYPASLATSGSARTVALVAFERSPPIXXXXXXXXXSAARFNAIGCTRRWSRARRLYLQL 530
M P+S AT GS R L FE SP S F +G RWSRA
Sbjct: 1 MASPSSFATLGSVRPKPLAVFEVSPLPVSVQRIHVISRVSFGCVGDAPRWSRA------- 53
Query: 531 YGGRV------ANLNERGIPESRLTTS*YXXXXXXXXXXLILMPAPKPVL*ASPNG 680
GRV +L E+GIP + +T ++L P+PKP L A NG
Sbjct: 54 -PGRVCRCLVTTDLIEKGIPFAPESTFRGSSGSREDDADIVLKPSPKPALKARANG 108
Score = 45.8 bits (107), Expect(2) = 3e-10
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 701 DSAFWSSDTAIREKP---ASKDRAKVIESQREVLGKLEGLEITKAVMFNG-DLRDRGVSN 868
+SA WS D +R+K KDR KVIES EVL K + LE K G ++RD SN
Sbjct: 114 NSALWSPDQVVRDKRPGITEKDRGKVIESLGEVLEKAQKLETVKPGRLVGKEIRDNDKSN 173
Query: 869 RSSKAFR 889
SS+ R
Sbjct: 174 GSSRPSR 180
>ref|XP_008775702.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
isoform X2 [Phoenix dactylifera]
Length = 851
Score = 48.5 bits (114), Expect(2) = 3e-10
Identities = 39/116 (33%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Frame = +3
Query: 351 MTYPASLATSGSARTVALVAFERSPPIXXXXXXXXXSAARFNAIGCTRRWSRARRLYLQL 530
M P+S AT GS R L FE SP S F +G RWSRA
Sbjct: 1 MASPSSFATLGSVRPKPLAVFEVSPLPVSVQRIHVISRVSFGCVGDAPRWSRA------- 53
Query: 531 YGGRV------ANLNERGIPESRLTTS*YXXXXXXXXXXLILMPAPKPVL*ASPNG 680
GRV +L E+GIP + +T ++L P+PKP L A NG
Sbjct: 54 -PGRVCRCLVTTDLIEKGIPFAPESTFRGSSGSREDDADIVLKPSPKPALKARANG 108
Score = 45.8 bits (107), Expect(2) = 3e-10
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 701 DSAFWSSDTAIREKP---ASKDRAKVIESQREVLGKLEGLEITKAVMFNG-DLRDRGVSN 868
+SA WS D +R+K KDR KVIES EVL K + LE K G ++RD SN
Sbjct: 114 NSALWSPDQVVRDKRPGITEKDRGKVIESLGEVLEKAQKLETVKPGRLVGKEIRDNDKSN 173
Query: 869 RSSKAFR 889
SS+ R
Sbjct: 174 GSSRPSR 180