BLASTX nr result

ID: Cheilocostus21_contig00033586 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00033586
         (654 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009406216.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    65   2e-08
ref|XP_009416728.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    63   7e-08
ref|XP_009415751.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    60   6e-07

>ref|XP_009406216.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Musa acuminata
           subsp. malaccensis]
          Length = 452

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 39/85 (45%), Positives = 47/85 (55%)
 Frame = -2

Query: 257 YSPTNVAVSFRPSVAIVIGVXXXXXXXXXXXLIYAKFCHSTXXXXXXXXXXXXXSDLFSY 78
           ++P+NVAVSFRPSV IVIG+           L+YAKFC S                  S 
Sbjct: 50  WTPSNVAVSFRPSVGIVIGIFTFMFSLTLLLLVYAKFCRSAAAPEPD-----------SL 98

Query: 77  GTAAGASHGRFLFPQNRFSGIDKSV 3
           G A  A HGR + PQ+RFSGIDK+V
Sbjct: 99  G-ADAAGHGRLILPQHRFSGIDKTV 122


>ref|XP_009416728.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Musa acuminata
           subsp. malaccensis]
          Length = 419

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 39/85 (45%), Positives = 46/85 (54%)
 Frame = -2

Query: 257 YSPTNVAVSFRPSVAIVIGVXXXXXXXXXXXLIYAKFCHSTXXXXXXXXXXXXXSDLFSY 78
           +SP NVAVSFRPSVA+VIG+            IY K CHS               DL   
Sbjct: 31  WSPPNVAVSFRPSVALVIGIFALMFFLTFLL-IYGKVCHSAAAAHAT--------DLL-- 79

Query: 77  GTAAGASHGRFLFPQNRFSGIDKSV 3
             A  A HGRF+ PQ+RFSGID++V
Sbjct: 80  -VADAAGHGRFILPQDRFSGIDRTV 103


>ref|XP_009415751.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Musa acuminata
           subsp. malaccensis]
          Length = 457

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 35/84 (41%), Positives = 45/84 (53%)
 Frame = -2

Query: 257 YSPTNVAVSFRPSVAIVIGVXXXXXXXXXXXLIYAKFCHSTXXXXXXXXXXXXXSDLFSY 78
           +S  +V +SFRP VA+VIG+           L+YAKFC S                   +
Sbjct: 59  WSQPDVTISFRPGVAVVIGIFAIMFSVTFLLLVYAKFCRSAASEF--------------F 104

Query: 77  GTAAGASHGRFLFPQNRFSGIDKS 6
           GTA+ A HG FL PQ+RFSGIDK+
Sbjct: 105 GTAS-AGHGEFLLPQHRFSGIDKA 127