BLASTX nr result

ID: Cheilocostus21_contig00033237 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00033237
         (937 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018675319.1| PREDICTED: DNA repair protein UVH3 isoform X...   156   8e-39
ref|XP_018675318.1| PREDICTED: DNA repair protein UVH3 isoform X...   156   8e-39
ref|XP_018675317.1| PREDICTED: DNA repair protein UVH3 isoform X...   156   8e-39
ref|XP_018677592.1| PREDICTED: DNA repair protein UVH3-like [Mus...   115   1e-24
ref|XP_017699576.1| PREDICTED: DNA repair protein UVH3 isoform X...    97   2e-18
ref|XP_017699575.1| PREDICTED: DNA repair protein UVH3 isoform X...    97   2e-18
ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis g...    73   2e-10
ref|XP_020276066.1| DNA repair protein UVH3 [Asparagus officinal...    62   7e-07

>ref|XP_018675319.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Musa acuminata subsp.
            malaccensis]
          Length = 1511

 Score =  156 bits (394), Expect = 8e-39
 Identities = 107/309 (34%), Positives = 155/309 (50%), Gaps = 12/309 (3%)
 Frame = -2

Query: 936  EEYNGRPNIVKEIAGSSKIDYKENHTSLTDKTFEETGMEWEEGVCHDTRATTNCQGEPEK 757
            +E +  PN   +I  S K D K+N +SL + ++E   ++WEEGVC +   ++    +P K
Sbjct: 549  KEISEIPNGFADITASPKSDLKKNQSSLAESSYEVADVDWEEGVCQNPDTSSQFLDKPVK 608

Query: 756  HVSRGLLEEEATMQEAIWRSLGXXXXXXXXXXXXXXXXXXXSTEHQSSSVAIFHNLKEST 577
             VSRG LEEEA +QEAI RSL                    S + Q S   I H L  +T
Sbjct: 609  DVSRGTLEEEADIQEAIRRSLEDFKEQNSSTNSSAVTELVRSVKDQISDGVILHKLVTNT 668

Query: 576  SMHLDEDSMKGSLQTDGKLDSFSKKDDVQITGSAKKXXXXXXXXXXXXXXLKQNLSLVNE 397
             +HLD D+ +     DG+LD+  K+DD+Q   S+K                    SL++ 
Sbjct: 669  CVHLDNDAEESPSCNDGQLDNRCKEDDLQNPDSSKNNLDSNNLSGLDFDGES---SLISS 725

Query: 396  KKDEHSVHEMLTDDIPPGKSSDADPSWQEQSIDA------------SNEEFGEISPNTNI 253
            ++DE  V      +IPPGK SD  PSW EQS+DA            S EE  EI P+T+ 
Sbjct: 726  REDEQIVMTSQRGNIPPGKPSDDHPSWLEQSLDASYEVQIKSCSRMSTEELCEIRPDTST 785

Query: 252  KVTNDGSKSAIGNSSLDVSQVSGLDLAIGKIHNNSDSENISLIKERGANTSTEQHHALEE 73
             +T+DGSK  +G+S+ D   +S   ++  + +NNS S N SL++E        Q +  E+
Sbjct: 786  NITDDGSK-VVGSSNHDSRHISRSSVSPERGYNNSLSGNSSLMEEIIDTGMKSQQNIAEK 844

Query: 72   TYGISNLIG 46
               IS+ IG
Sbjct: 845  DNVISDHIG 853


>ref|XP_018675318.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Musa acuminata subsp.
            malaccensis]
          Length = 1534

 Score =  156 bits (394), Expect = 8e-39
 Identities = 107/309 (34%), Positives = 155/309 (50%), Gaps = 12/309 (3%)
 Frame = -2

Query: 936  EEYNGRPNIVKEIAGSSKIDYKENHTSLTDKTFEETGMEWEEGVCHDTRATTNCQGEPEK 757
            +E +  PN   +I  S K D K+N +SL + ++E   ++WEEGVC +   ++    +P K
Sbjct: 549  KEISEIPNGFADITASPKSDLKKNQSSLAESSYEVADVDWEEGVCQNPDTSSQFLDKPVK 608

Query: 756  HVSRGLLEEEATMQEAIWRSLGXXXXXXXXXXXXXXXXXXXSTEHQSSSVAIFHNLKEST 577
             VSRG LEEEA +QEAI RSL                    S + Q S   I H L  +T
Sbjct: 609  DVSRGTLEEEADIQEAIRRSLEDFKEQNSSTNSSAVTELVRSVKDQISDGVILHKLVTNT 668

Query: 576  SMHLDEDSMKGSLQTDGKLDSFSKKDDVQITGSAKKXXXXXXXXXXXXXXLKQNLSLVNE 397
             +HLD D+ +     DG+LD+  K+DD+Q   S+K                    SL++ 
Sbjct: 669  CVHLDNDAEESPSCNDGQLDNRCKEDDLQNPDSSKNNLDSNNLSGLDFDGES---SLISS 725

Query: 396  KKDEHSVHEMLTDDIPPGKSSDADPSWQEQSIDA------------SNEEFGEISPNTNI 253
            ++DE  V      +IPPGK SD  PSW EQS+DA            S EE  EI P+T+ 
Sbjct: 726  REDEQIVMTSQRGNIPPGKPSDDHPSWLEQSLDASYEVQIKSCSRMSTEELCEIRPDTST 785

Query: 252  KVTNDGSKSAIGNSSLDVSQVSGLDLAIGKIHNNSDSENISLIKERGANTSTEQHHALEE 73
             +T+DGSK  +G+S+ D   +S   ++  + +NNS S N SL++E        Q +  E+
Sbjct: 786  NITDDGSK-VVGSSNHDSRHISRSSVSPERGYNNSLSGNSSLMEEIIDTGMKSQQNIAEK 844

Query: 72   TYGISNLIG 46
               IS+ IG
Sbjct: 845  DNVISDHIG 853


>ref|XP_018675317.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Musa acuminata subsp.
            malaccensis]
          Length = 1576

 Score =  156 bits (394), Expect = 8e-39
 Identities = 107/309 (34%), Positives = 155/309 (50%), Gaps = 12/309 (3%)
 Frame = -2

Query: 936  EEYNGRPNIVKEIAGSSKIDYKENHTSLTDKTFEETGMEWEEGVCHDTRATTNCQGEPEK 757
            +E +  PN   +I  S K D K+N +SL + ++E   ++WEEGVC +   ++    +P K
Sbjct: 549  KEISEIPNGFADITASPKSDLKKNQSSLAESSYEVADVDWEEGVCQNPDTSSQFLDKPVK 608

Query: 756  HVSRGLLEEEATMQEAIWRSLGXXXXXXXXXXXXXXXXXXXSTEHQSSSVAIFHNLKEST 577
             VSRG LEEEA +QEAI RSL                    S + Q S   I H L  +T
Sbjct: 609  DVSRGTLEEEADIQEAIRRSLEDFKEQNSSTNSSAVTELVRSVKDQISDGVILHKLVTNT 668

Query: 576  SMHLDEDSMKGSLQTDGKLDSFSKKDDVQITGSAKKXXXXXXXXXXXXXXLKQNLSLVNE 397
             +HLD D+ +     DG+LD+  K+DD+Q   S+K                    SL++ 
Sbjct: 669  CVHLDNDAEESPSCNDGQLDNRCKEDDLQNPDSSKNNLDSNNLSGLDFDGES---SLISS 725

Query: 396  KKDEHSVHEMLTDDIPPGKSSDADPSWQEQSIDA------------SNEEFGEISPNTNI 253
            ++DE  V      +IPPGK SD  PSW EQS+DA            S EE  EI P+T+ 
Sbjct: 726  REDEQIVMTSQRGNIPPGKPSDDHPSWLEQSLDASYEVQIKSCSRMSTEELCEIRPDTST 785

Query: 252  KVTNDGSKSAIGNSSLDVSQVSGLDLAIGKIHNNSDSENISLIKERGANTSTEQHHALEE 73
             +T+DGSK  +G+S+ D   +S   ++  + +NNS S N SL++E        Q +  E+
Sbjct: 786  NITDDGSK-VVGSSNHDSRHISRSSVSPERGYNNSLSGNSSLMEEIIDTGMKSQQNIAEK 844

Query: 72   TYGISNLIG 46
               IS+ IG
Sbjct: 845  DNVISDHIG 853


>ref|XP_018677592.1| PREDICTED: DNA repair protein UVH3-like [Musa acuminata subsp.
            malaccensis]
          Length = 772

 Score =  115 bits (287), Expect = 1e-24
 Identities = 82/266 (30%), Positives = 129/266 (48%)
 Frame = -2

Query: 843  TFEETGMEWEEGVCHDTRATTNCQGEPEKHVSRGLLEEEATMQEAIWRSLGXXXXXXXXX 664
            ++E   ++WE+GVC +   ++    +P K VSRG+L+EEA +QEAI RS           
Sbjct: 246  SYEVADVDWEKGVCQNPDTSSQFLDKPVKDVSRGMLQEEADIQEAIRRSPEDFKEQNSST 305

Query: 663  XXXXXXXXXXSTEHQSSSVAIFHNLKESTSMHLDEDSMKGSLQTDGKLDSFSKKDDVQIT 484
                      S + Q S   I H L  +T +HL  D+ +     DG+LD+  K+DD+QI 
Sbjct: 306  NSSAVTKLMRSVKDQISDGVILHKLVTNTCVHLGNDAEESPSCNDGQLDNRCKEDDLQIP 365

Query: 483  GSAKKXXXXXXXXXXXXXXLKQNLSLVNEKKDEHSVHEMLTDDIPPGKSSDADPSWQEQS 304
             S+K                    SL++ ++DE +V      +IPP K SD  P    ++
Sbjct: 366  DSSKNNLDSYNLSGLDLDGES---SLLSRREDEQNVMTSQRGNIPPCKPSDGHPKCPWRN 422

Query: 303  IDASNEEFGEISPNTNIKVTNDGSKSAIGNSSLDVSQVSGLDLAIGKIHNNSDSENISLI 124
               S        PNT+ K+T+DGS+  +G+S+ D   +S   ++  + +NNS S N SL+
Sbjct: 423  CVRSR-------PNTSTKITDDGSEVVVGSSNRDSRHLSRSSVSPERGYNNSLSGNSSLM 475

Query: 123  KERGANTSTEQHHALEETYGISNLIG 46
            +E        Q +  E+   IS+ IG
Sbjct: 476  EEIIDTGMKSQQNIAEKDNTISDHIG 501


>ref|XP_017699576.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Phoenix dactylifera]
          Length = 1108

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 90/305 (29%), Positives = 138/305 (45%), Gaps = 25/305 (8%)
 Frame = -2

Query: 912  IVKEIAGSSKIDYKENHTSLTDK-TFEETGMEWEEGVCHDTRATTNCQGEPEKHVSRGLL 736
            +V+  AGS K  +KE+ + L ++ ++EE  ++WE+GVCH  R  +  Q +PEK VS GLL
Sbjct: 544  MVEGNAGSQKSGHKESQSFLAERNSYEEDEVDWEDGVCHVPRVASPRQAKPEKSVSIGLL 603

Query: 735  EEEATMQEAIWRSLGXXXXXXXXXXXXXXXXXXXSTEHQSSSVAIFHN-----LKESTSM 571
            EEEA MQEAI RSL                    S+E +    ++F+N         T++
Sbjct: 604  EEEADMQEAIRRSLEDFEKRKSSIMTSENQILGKSSEDRGFVGSLFNNSTLSKSSRDTNV 663

Query: 570  HLDED-----SMKGSLQTDGKLDSFSKKDDVQITGSAKKXXXXXXXXXXXXXXLKQNLSL 406
            HL+        +  ++   G+ D+ S++D +Q+T S KK              + +  S 
Sbjct: 664  HLESHIGRSLPLSATMDEHGQHDNASRQDVLQMTDSGKK---HLSPSTSSGVDVDRKSSP 720

Query: 405  VNEKKDEHSVHEMLTDDIPPGKSSDADPSWQEQ-----SIDASNE-------EFGEIS-- 268
            +N+ KD+ S   +   ++P  +  D      EQ     S  A NE       EF E S  
Sbjct: 721  MNDSKDDESGRALYQINVPSAEPVDGHLGQIEQCCLDTSEVAKNEHNLISTNEFAETSYD 780

Query: 267  PNTNIKVTNDGSKSAIGNSSLDVSQVSGLDLAIGKIHNNSDSENISLIKERGANTSTEQH 88
             + N     D   SA  +     SQ S   LA GK +N+  S+  SL++E   N   E  
Sbjct: 781  ISANTSSVPDAVLSAAHHDDRAASQSS---LAFGKGNNDEYSQKSSLVEEAVDNNGKEPE 837

Query: 87   HALEE 73
               E+
Sbjct: 838  QVTEK 842


>ref|XP_017699575.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Phoenix dactylifera]
          Length = 1227

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 90/305 (29%), Positives = 138/305 (45%), Gaps = 25/305 (8%)
 Frame = -2

Query: 912  IVKEIAGSSKIDYKENHTSLTDK-TFEETGMEWEEGVCHDTRATTNCQGEPEKHVSRGLL 736
            +V+  AGS K  +KE+ + L ++ ++EE  ++WE+GVCH  R  +  Q +PEK VS GLL
Sbjct: 544  MVEGNAGSQKSGHKESQSFLAERNSYEEDEVDWEDGVCHVPRVASPRQAKPEKSVSIGLL 603

Query: 735  EEEATMQEAIWRSLGXXXXXXXXXXXXXXXXXXXSTEHQSSSVAIFHN-----LKESTSM 571
            EEEA MQEAI RSL                    S+E +    ++F+N         T++
Sbjct: 604  EEEADMQEAIRRSLEDFEKRKSSIMTSENQILGKSSEDRGFVGSLFNNSTLSKSSRDTNV 663

Query: 570  HLDED-----SMKGSLQTDGKLDSFSKKDDVQITGSAKKXXXXXXXXXXXXXXLKQNLSL 406
            HL+        +  ++   G+ D+ S++D +Q+T S KK              + +  S 
Sbjct: 664  HLESHIGRSLPLSATMDEHGQHDNASRQDVLQMTDSGKK---HLSPSTSSGVDVDRKSSP 720

Query: 405  VNEKKDEHSVHEMLTDDIPPGKSSDADPSWQEQ-----SIDASNE-------EFGEIS-- 268
            +N+ KD+ S   +   ++P  +  D      EQ     S  A NE       EF E S  
Sbjct: 721  MNDSKDDESGRALYQINVPSAEPVDGHLGQIEQCCLDTSEVAKNEHNLISTNEFAETSYD 780

Query: 267  PNTNIKVTNDGSKSAIGNSSLDVSQVSGLDLAIGKIHNNSDSENISLIKERGANTSTEQH 88
             + N     D   SA  +     SQ S   LA GK +N+  S+  SL++E   N   E  
Sbjct: 781  ISANTSSVPDAVLSAAHHDDRAASQSS---LAFGKGNNDEYSQKSSLVEEAVDNNGKEPE 837

Query: 87   HALEE 73
               E+
Sbjct: 838  QVTEK 842


>ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis guineensis]
          Length = 1567

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 19/299 (6%)
 Frame = -2

Query: 912  IVKEIAGSSKIDYKENHTSLTDKTFE-ETGMEWEEGVCHDTRATTNCQGEPEKHVSRGLL 736
            +V+  +GS K  +KE+ + L ++    E  ++WE+GVCH  +  +  Q +PEK VS GLL
Sbjct: 546  MVEGNSGSQKSGHKESQSFLAERNSNVEDEVDWEDGVCHVPKVASPKQAKPEKAVSIGLL 605

Query: 735  EEEATMQEAIWRSLGXXXXXXXXXXXXXXXXXXXSTEHQSSSVAIFHNLKESTSMHLD-- 562
            EEEA +QEAI RSL                    S+E +S + ++F+N   S S+     
Sbjct: 606  EEEADIQEAIRRSLDDFEKQKSSIMTSENQILGESSEDRSFARSLFNNSTLSKSIGDTNV 665

Query: 561  --EDSMKGSLQTDGKLDSFSKKDDVQITGSAKKXXXXXXXXXXXXXXLKQNLSLVNEKKD 388
              E  +  SL     +    + D+  +                    + +  S++N+ KD
Sbjct: 666  PLESHIGRSLPLCATVAEHGQHDNAGVLRMTDSGKKHLSPSTSSGVEVDRKSSVMNDSKD 725

Query: 387  EHSVHEMLTDDIPPGKSSDADPSWQEQ-----SIDASNE-------EFGEISPNTNIKVT 244
            + S   +   + P  +  D   S  +Q     S  A NE       EF E S + ++  +
Sbjct: 726  DESGRTLCQINAPSAEPVDDHLSQIKQCCLDTSEVAKNECSLISTNEFAETSYDISVNTS 785

Query: 243  N--DGSKSAIGNSSLDVSQVSGLDLAIGKIHNNSDSENISLIKERGANTSTEQHHALEE 73
            +  D   SA  +     SQ S   L+ G  +N+  S+  SL++E   N   E    + +
Sbjct: 786  SVPDAVLSAAHHDDCAASQSS---LSFGNGNNDVYSQKSSLVEEAVDNDGEEPEQVIAQ 841


>ref|XP_020276066.1| DNA repair protein UVH3 [Asparagus officinalis]
 gb|ONK63702.1| uncharacterized protein A4U43_C07F18000 [Asparagus officinalis]
          Length = 1495

 Score = 62.0 bits (149), Expect = 7e-07
 Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = -2

Query: 873 KENHTSLT-DKTFEETGMEWEEGVCHDTRATTNCQGEPEKHVSRGLLEEEATMQEAIWRS 697
           KE+ +SL  DK+ E+  MEWEEG C   +  +NC    EK VSRG LEEEA +QEAI RS
Sbjct: 546 KEDRSSLAEDKSCEKCEMEWEEGDCDVPKDVSNCYAGQEKAVSRGFLEEEADIQEAIRRS 605

Query: 696 L 694
           L
Sbjct: 606 L 606


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