BLASTX nr result

ID: Cheilocostus21_contig00032903 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00032903
         (589 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009411534.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-24
ref|XP_019707116.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-16
ref|XP_008778298.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-16

>ref|XP_009411534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Musa acuminata subsp. malaccensis]
          Length = 536

 Score =  108 bits (270), Expect = 5e-24
 Identities = 71/179 (39%), Positives = 91/179 (50%)
 Frame = +2

Query: 53  MRSIIIFGRRSGKIVYGSYLCVRPSSGLCNNGGGQDKELSTHSDENFDLGPIGCPSDGAR 232
           MRSI++ G RSG+I+ GS L V PS  LC+N  G+D      S +  D G +G   +  R
Sbjct: 1   MRSIVLLGHRSGRILSGSCLWVWPSRSLCSNQCGKDDGFPKDSSKKVDPGHLGISPERVR 60

Query: 233 EDNQADASRGAEKRQTPAEKKFERVDXXXXXXXXXXXXXXXXXSLDCERLPEEAILCFXX 412
            D +A  S+ AE+R   A+ KF+                     L+C  LPEE +L F  
Sbjct: 61  RDKEAFPSKDAEERLDFADNKFD-------------FGGNNEEELECGHLPEETLLGF-- 105

Query: 413 XXXXXXXXXXXXXXXXXXXNINHRQKFKEEIKAEADRVIEILQQDGPGFIVRAALDELQ 589
                              NIN R++F E  KAEADRV EILQQDGP F VR+ALDEL+
Sbjct: 106 -SIGGTDTADDDDQSDRCGNINPRRRFIEGNKAEADRVFEILQQDGPAFNVRSALDELR 163


>ref|XP_019707116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Elaeis guineensis]
 ref|XP_019707117.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Elaeis guineensis]
 ref|XP_019707118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Elaeis guineensis]
          Length = 561

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 63/198 (31%), Positives = 84/198 (42%), Gaps = 19/198 (9%)
 Frame = +2

Query: 53  MRSIIIFGRRSGKIVYGSYLCVRPSSGLCNNGGGQDKELSTHSDENFDLG---------- 202
           MRS ++FG R GKI   S   + PS GL NNG   D+E S  +DE  D G          
Sbjct: 1   MRSTVLFGPRYGKIYSRSRTRIWPSMGLYNNGNRADEEDSKDTDEKLDAGNLHNGSQTQN 60

Query: 203 --------PIGCPSDGAREDNQADASRGAEKRQTPAEKKFE-RVDXXXXXXXXXXXXXXX 355
                    +G   DG++  N  D     +    P E   E   D               
Sbjct: 61  LKDNGEKLDLGHLHDGSKTQNSEDNDEKLDLGHLPDESNLEPSPDKAEDSHDHSGHPKDN 120

Query: 356 XXSLDCERLPEEAILCFXXXXXXXXXXXXXXXXXXXXXNINHRQKFKEEIKAEADRVIEI 535
             + DCE LP+E +L F                      +N R++F E +K++AD+V +I
Sbjct: 121 DETFDCEHLPQETLLKFSPEKVNGDDHDY----------LNTRRRFIEGVKSKADQVFQI 170

Query: 536 LQQDGPGFIVRAALDELQ 589
           LQQDGPGF  R  L+ELQ
Sbjct: 171 LQQDGPGFDARLVLEELQ 188


>ref|XP_008778298.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Phoenix dactylifera]
 ref|XP_008778299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Phoenix dactylifera]
          Length = 560

 Score = 86.7 bits (213), Expect = 3e-16
 Identities = 62/197 (31%), Positives = 82/197 (41%), Gaps = 18/197 (9%)
 Frame = +2

Query: 53  MRSIIIFGRRSGKIVYGSYLCVRPSSGLCNNGGGQDKELSTHSDENFDLG---------- 202
           MRS I+F  R GK   GS   + PS GLCNNG   D+E S  +DE  DLG          
Sbjct: 1   MRSTILFCSRYGKFFSGSRTRIWPSMGLCNNGSRADEENSKDTDERLDLGHLHNGSQTQN 60

Query: 203 --------PIGCPSDGAREDNQADASRGAEKRQTPAEKKFERVDXXXXXXXXXXXXXXXX 358
                    +G   DG++  +  D+    +    P E   E                   
Sbjct: 61  LKDNSERLDLGHLHDGSKIQDAKDSGEKLDLGHLPDESNRESGPNKADNHDHSGHPKDND 120

Query: 359 XSLDCERLPEEAILCFXXXXXXXXXXXXXXXXXXXXXNINHRQKFKEEIKAEADRVIEIL 538
              DCE L +E  L F                     ++N R++F E +K+ AD+V +IL
Sbjct: 121 ERFDCEHLSQETFLKF----------SPEGADGDDHDDLNIRRRFLEGVKSNADQVFQIL 170

Query: 539 QQDGPGFIVRAALDELQ 589
           QQDGPGF  R  L+ELQ
Sbjct: 171 QQDGPGFDARPVLEELQ 187


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