BLASTX nr result

ID: Cheilocostus21_contig00032629 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00032629
         (773 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY73612.1| Phytochrome C [Ananas comosus]                          59   5e-06
ref|XP_020091676.1| phytochrome C [Ananas comosus] >gi|114757593...    59   5e-06
ref|XP_009402833.1| PREDICTED: phytochrome C [Musa acuminata sub...    59   5e-06

>gb|OAY73612.1| Phytochrome C [Ananas comosus]
          Length = 1114

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +1

Query: 667 VVAQTSLDAQLHADFEESERPFDYYTSIGAANRSS 771
           VVAQTSLDA+LHADFE+S +PFDY TS+GAANR S
Sbjct: 26  VVAQTSLDAKLHADFEDSAQPFDYPTSMGAANRLS 60


>ref|XP_020091676.1| phytochrome C [Ananas comosus]
 ref|XP_020091677.1| phytochrome C [Ananas comosus]
 ref|XP_020091678.1| phytochrome C [Ananas comosus]
          Length = 1139

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +1

Query: 667 VVAQTSLDAQLHADFEESERPFDYYTSIGAANRSS 771
           VVAQTSLDA+LHADFE+S +PFDY TS+GAANR S
Sbjct: 26  VVAQTSLDAKLHADFEDSAQPFDYPTSMGAANRLS 60


>ref|XP_009402833.1| PREDICTED: phytochrome C [Musa acuminata subsp. malaccensis]
          Length = 1143

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +1

Query: 667 VVAQTSLDAQLHADFEESERPFDYYTSIGAANRSS 771
           VVAQT+LDA+LHADFE+ + PFDY +SIGAANRSS
Sbjct: 24  VVAQTTLDAKLHADFEDPDHPFDYSSSIGAANRSS 58


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