BLASTX nr result
ID: Cheilocostus21_contig00032479
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00032479
(3645 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 270 0.0
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 269 0.0
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 267 0.0
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo... 266 0.0
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo... 266 0.0
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo... 266 0.0
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 272 0.0
gb|ACN78973.1| copia-type polyprotein [Glycine max] >gi|22501615... 266 0.0
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 266 0.0
gb|AIC77183.1| polyprotein [Gossypium barbadense] 262 0.0
gb|KYP66838.1| Retrovirus-related Pol polyprotein from transposo... 202 0.0
gb|PNX96991.1| retrotransposon-related protein [Trifolium pratense] 187 e-176
emb|CAH67713.1| H0512B01.8 [Oryza sativa] 211 e-171
dbj|GAU44417.1| hypothetical protein TSUD_100640 [Trifolium subt... 204 e-170
gb|PNX93875.1| copia-type polyprotein [Trifolium pratense] 200 e-166
dbj|GAU23361.1| hypothetical protein TSUD_334080 [Trifolium subt... 206 e-165
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 182 e-164
gb|PNX98468.1| putative copia-type polyprotein, partial [Trifoli... 207 e-164
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 212 e-162
dbj|GAU26309.1| hypothetical protein TSUD_56070 [Trifolium subte... 218 e-162
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 270 bits (690), Expect(5) = 0.0
Identities = 144/251 (57%), Positives = 186/251 (74%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GY + I+ +EVFA ++LAA + KI M VK AFLNG LEE+VYIEQP
Sbjct: 906 GYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 965
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
Y+VKG E+KVL+LKKALYG+KQAP+AW +RID+YFK K+FIK P+E+ L +K++K D
Sbjct: 966 QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKE-D 1024
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
ILI LYVDDLIFTGNN SMF EFKKEM +FEM DIG MSYYLGIEVKQ D GIF++Q+
Sbjct: 1025 ILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQE 1084
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA +VL++F M D + T ++ IKLS+ ++ E VD T ++ L+ +LRYLT TRPDIL
Sbjct: 1085 GYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDIL 1144
Query: 522 YGVGLLSCFID 490
Y VG++S +++
Sbjct: 1145 YAVGVVSRYME 1155
Score = 218 bits (556), Expect(5) = 0.0
Identities = 155/455 (34%), Positives = 220/455 (48%), Gaps = 41/455 (9%)
Frame = -3
Query: 3349 TMKENLGFEEEEATKATNKQEIVVNLMKGQEED*TKISPTQKTHRSFTNLADMRGKSIRN 3170
T+++ LG + K K++I+ ++ Q TK Q R RG+
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIIEQVLNMQI---TKEENGQSYQRRGGGQVRGRGRGGYG 242
Query: 3169 NL--------NNTASSSDSKCGREI*HNK-RERRG*V*CLNCKKYRHYAT*CRHANRRTK 3017
N N +S GR H K R + V C NC K+ HYA+ C+ + +
Sbjct: 243 NGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKF 302
Query: 3016 NSFCTQVEKKEEESAFLLSCNKEKKEQEA---WIMDIAASNHMTGKKDLFVSLNESFKRS 2846
VE+K +E LL + +K EQE W +D ASNHM G+K +F L+ES + +
Sbjct: 303 EEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGN 362
Query: 2845 TSFGDGRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILSLGQ---------LKDG 2693
+ GD K++V G NILI NG HQFIS VYY+P++K+NILSLGQ LKD
Sbjct: 363 VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDN 422
Query: 2692 SMTI*NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCTSYSSWF*GITE*DI*ILIA*N 2513
+++I + E+ + KV MS+N MF L ++ D+ +CLK+C SW
Sbjct: 423 NLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWL--------------- 467
Query: 2512 N*LSRWLMDF-HMLTVQIRCAKVVVMENTLEIVFQRNHT-----QGQHNHSNWYMQTFVA 2351
W + F H+ + M L + N G+ ++ ++
Sbjct: 468 -----WHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSR 522
Query: 2350 QLIQFHLVRVDI------------SYYL--FDDFSRKIWVYFLKEKSEAFDAFMKFKSLV 2213
L+ D+ +Y+L DDFSRK WVYFLKEKSE F+ F KFK+ V
Sbjct: 523 AQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582
Query: 2212 EN*SGFSIKALCTDRGGEFTSKTFNNFCESNGIKR 2108
E SG IK + +DRGGEFTSK F +CE NGI+R
Sbjct: 583 EKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRR 617
Score = 214 bits (545), Expect(5) = 0.0
Identities = 113/236 (47%), Positives = 148/236 (62%), Gaps = 2/236 (0%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
QE W+G K + HLRVFGS+A++H+ DE R +LDDKS+K++FIGYD SKGYKL+NP+ K
Sbjct: 681 QEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTK 740
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
K ISR++ DEE W W + E DYNF P F ++ P PT E P S P+
Sbjct: 741 KTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE-----------PEPTREEPPSEEPT 789
Query: 1583 LSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETET-HNISLYCLFIGSELVDFKDAI*DEQ 1407
I SSS R + R + +Y TE N++L+CLF E +DF++AI +
Sbjct: 790 TPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKT 849
Query: 1406 *IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
+AM EIKSI KN+TW+L LP K IGVKWVYK KKN +G +E++KA LVAK
Sbjct: 850 WRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAK 905
Score = 207 bits (528), Expect(5) = 0.0
Identities = 97/163 (59%), Positives = 128/163 (78%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
IK T++FGL Y+ +S +KLVGYSDSDWGGD+DD KST+G++ SKKQ I++
Sbjct: 1172 IKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVV 1231
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LSTCEAEYVAAT CV HAI L+NLLK + + Q++ T +FVDN S I L KN +FHDR +H
Sbjct: 1232 LSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKH 1291
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
ID+R+H+IREC++KK+V+L+Y+K+ DQ+ADI TKPLK EDF +
Sbjct: 1292 IDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1334
Score = 68.2 bits (165), Expect(5) = 0.0
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -1
Query: 2097 VPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
VP SPQQN V ERKNRTIL+M SMLKSK + K EA+AC+VYL NR T+ + K
Sbjct: 621 VPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGK 678
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 269 bits (687), Expect(5) = 0.0
Identities = 143/251 (56%), Positives = 186/251 (74%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GYS + I+ +EVFA ++LAA + KI M VK AFLNG LEE+VYIEQP
Sbjct: 906 GYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 965
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
Y+VKG E+KVL+LKK LYG+KQAP+AW +RID+YFK K+FIK P+E+ L +K++K D
Sbjct: 966 QGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKE-D 1024
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
ILI LYVDDLIFTGNN S+F EFKKEM +FEM DIG MSYYLGIEVKQ D GIF++Q+
Sbjct: 1025 ILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQE 1084
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA +VL++F M D + T ++ IKLS+ ++ E VD T ++ L+ +LRYLT TRPDIL
Sbjct: 1085 GYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDIL 1144
Query: 522 YGVGLLSCFID 490
Y VG++S +++
Sbjct: 1145 YAVGVVSRYME 1155
Score = 217 bits (553), Expect(5) = 0.0
Identities = 155/455 (34%), Positives = 219/455 (48%), Gaps = 41/455 (9%)
Frame = -3
Query: 3349 TMKENLGFEEEEATKATNKQEIVVNLMKGQEED*TKISPTQKTHRSFTNLADMRGKSIRN 3170
T+++ LG + K K++IV ++ Q TK Q R RG+
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIVEQVLNMQI---TKEENGQSYQRRGGGQVRGRGRGGYG 242
Query: 3169 NL--------NNTASSSDSKCGREI*HNK-RERRG*V*CLNCKKYRHYAT*CRHANRRTK 3017
N N +S GR H K R + V C NC K+ HYA+ C+ + +
Sbjct: 243 NGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKF 302
Query: 3016 NSFCTQVEKKEEESAFLLSCN---KEKKEQEAWIMDIAASNHMTGKKDLFVSLNESFKRS 2846
VE+K +E LL + E+KE W +D ASNHM G+K +F L+ES + +
Sbjct: 303 EEKANYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGN 362
Query: 2845 TSFGDGRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILSLGQ---------LKDG 2693
+ GD K++V G NILI NG HQFIS VYY+P++K+NILSLGQ LKD
Sbjct: 363 VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDN 422
Query: 2692 SMTI*NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCTSYSSWF*GITE*DI*ILIA*N 2513
+++I + E+ + KV MS+N MF L ++ D+ +CLK+C SW
Sbjct: 423 NLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWL--------------- 467
Query: 2512 N*LSRWLMDF-HMLTVQIRCAKVVVMENTLEIVFQRNHT-----QGQHNHSNWYMQTFVA 2351
W + F H+ + M L + N G+ ++ ++
Sbjct: 468 -----WHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSR 522
Query: 2350 QLIQFHLVRVDI------------SYYL--FDDFSRKIWVYFLKEKSEAFDAFMKFKSLV 2213
L+ D+ +Y+L DDFSRK WVYFLKEKSE F+ F KFK+ V
Sbjct: 523 AQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582
Query: 2212 EN*SGFSIKALCTDRGGEFTSKTFNNFCESNGIKR 2108
E SG IK + +DRGGEFTSK F +CE NGI+R
Sbjct: 583 EKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRR 617
Score = 216 bits (550), Expect(5) = 0.0
Identities = 114/236 (48%), Positives = 148/236 (62%), Gaps = 2/236 (0%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
QE W+G KP + HLRVFGS+A++H+ DE R +LDDKS+K++FIGYD SKGYKL+NP+ K
Sbjct: 681 QEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTK 740
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
K ISR++ DEE W W + E DYNF P F ++ P PT E P S P+
Sbjct: 741 KTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE-----------PEPTREEPPSEEPT 789
Query: 1583 LSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETET-HNISLYCLFIGSELVDFKDAI*DEQ 1407
I SSS R + R + +Y TE N++L+CLF E +DF+ AI +
Sbjct: 790 TPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKT 849
Query: 1406 *IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
+AM EIKSI KN+TW+L LP K IGVKWVYK KKN +G +E++KA LVAK
Sbjct: 850 WRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAK 905
Score = 202 bits (515), Expect(5) = 0.0
Identities = 95/163 (58%), Positives = 126/163 (77%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
IK T++FGL Y+ +S +KLVGYSDSDWGGD+DD KST+G++ SKKQ I+
Sbjct: 1172 IKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVT 1231
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LSTCEAEYVAAT CV HAI L+NLLK + + Q++ T +FVDN S I L KN +FHDR +H
Sbjct: 1232 LSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKH 1291
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
ID+R+H+IREC++KK+V+L+Y+K+ DQ+AD TKPLK E+F +
Sbjct: 1292 IDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIK 1334
Score = 69.7 bits (169), Expect(5) = 0.0
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = -1
Query: 2097 VPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
VP SPQQN VVERKNRTIL+M SMLKSK + K EA+AC+VYL NR T+ + K
Sbjct: 621 VPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGK 678
Score = 62.4 bits (150), Expect = 8e-06
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Frame = -2
Query: 3569 VWCIVNQLRKYGEKLEDTHVVEKILCSLDKKFNYIVVAIKESRELEAMTIDQL------- 3411
V + N L++ GEKL+D ++EK+L SLD KF +IV I+E+++LEAMTI+QL
Sbjct: 138 VLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAY 197
Query: 3410 --KERMNEEPQKEVLLSKLPIADN 3345
K++ E+ ++VL ++ +N
Sbjct: 198 EEKKKKKEDIVEQVLNMQITKEEN 221
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 267 bits (683), Expect(5) = 0.0
Identities = 142/251 (56%), Positives = 186/251 (74%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GYS + I+ +EVFA ++LAA + KI M VK AFLNG LEE+VYIEQP
Sbjct: 906 GYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 965
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
Y+VKG E+KVL+LKK LYG+KQAP+AW +RID+YFK K+FIK P+E+ L +K++K D
Sbjct: 966 QGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKE-D 1024
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
ILI LYVDDLIFTGNN S+F EFKKEM +FEM DIG MSYYLGIEVKQ D GIF++Q+
Sbjct: 1025 ILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQE 1084
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA +VL++F + D + T ++ IKLS+ ++ E VD T ++ L+ +LRYLT TRPDIL
Sbjct: 1085 GYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDIL 1144
Query: 522 YGVGLLSCFID 490
Y VG++S +++
Sbjct: 1145 YAVGVVSRYME 1155
Score = 216 bits (550), Expect(5) = 0.0
Identities = 114/236 (48%), Positives = 148/236 (62%), Gaps = 2/236 (0%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
QE W+G KP + HLRVFGS+A++H+ DE R +LDDKS+K++FIGYD SKGYKL+NP+ K
Sbjct: 681 QEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTK 740
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
K ISR++ DEE W W + E DYNF P F ++ P PT E P S P+
Sbjct: 741 KTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE-----------PEPTREEPPSEEPT 789
Query: 1583 LSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETET-HNISLYCLFIGSELVDFKDAI*DEQ 1407
I SSS R + R + +Y TE N++L+CLF E +DF+ AI +
Sbjct: 790 TPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKT 849
Query: 1406 *IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
+AM EIKSI KN+TW+L LP K IGVKWVYK KKN +G +E++KA LVAK
Sbjct: 850 WRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAK 905
Score = 216 bits (549), Expect(5) = 0.0
Identities = 140/385 (36%), Positives = 195/385 (50%), Gaps = 33/385 (8%)
Frame = -3
Query: 3163 NNTASSSDSKCGREI*HNK-RERRG*V*CLNCKKYRHYAT*CRHANRRTKNSFCTQVEKK 2987
N +S GR H K R + V C NC K+ HYA+ C+ + + VE+K
Sbjct: 253 NTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKAHYVEEK 312
Query: 2986 EEESAFLLSCN---KEKKEQEAWIMDIAASNHMTGKKDLFVSLNESFKRSTSFGDGRKVD 2816
+E LL + E+KE W +D ASNHM G+K +F L+ES + + + GD K++
Sbjct: 313 IQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKME 372
Query: 2815 VTGIRNILIISNNGSHQFISQVYYVPALKSNILSLGQ---------LKDGSMTI*NSENK 2663
V G NILI NG HQFIS VYY+P++K+NILSLGQ LKD +++I + E+
Sbjct: 373 VKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESN 432
Query: 2662 FLAKVKMSQNVMFSLVLKTDMPRCLKVCTSYSSWF*GITE*DI*ILIA*NN*LSRWLMDF 2483
+ KV MS+N MF L ++ D+ +CLK+C SW W + F
Sbjct: 433 LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWL--------------------WHLRF 472
Query: 2482 -HMLTVQIRCAKVVVMENTLEIVFQRNHT-----QGQHNHSNWYMQTFVAQLIQFHLVRV 2321
H+ + M L + N G+ ++ ++ L+
Sbjct: 473 GHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHT 532
Query: 2320 DI------------SYYL--FDDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKA 2183
D+ +Y+L DDFSRK WVYFLKEKSE F+ F KFK+ VE SG IK
Sbjct: 533 DVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKT 592
Query: 2182 LCTDRGGEFTSKTFNNFCESNGIKR 2108
+ +DRGGEFTSK F +CE NGI+R
Sbjct: 593 MRSDRGGEFTSKEFLKYCEDNGIRR 617
Score = 202 bits (515), Expect(5) = 0.0
Identities = 95/163 (58%), Positives = 126/163 (77%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
IK T++FGL Y+ +S +KLVGYSDSDWGGD+DD KST+G++ SKKQ I+
Sbjct: 1172 IKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVT 1231
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LSTCEAEYVAAT CV HAI L+NLLK + + Q++ T +FVDN S I L KN +FHDR +H
Sbjct: 1232 LSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKH 1291
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
ID+R+H+IREC++KK+V+L+Y+K+ DQ+AD TKPLK E+F +
Sbjct: 1292 IDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIK 1334
Score = 69.7 bits (169), Expect(5) = 0.0
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = -1
Query: 2097 VPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
VP SPQQN VVERKNRTIL+M SMLKSK + K EA+AC+VYL NR T+ + K
Sbjct: 621 VPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGK 678
Score = 62.8 bits (151), Expect = 6e-06
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Frame = -2
Query: 3569 VWCIVNQLRKYGEKLEDTHVVEKILCSLDKKFNYIVVAIKESRELEAMTIDQL------- 3411
V + N L++ GEKL+D ++EK+L SLD KF +IV I+E+++LEAMTI+QL
Sbjct: 138 VLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAY 197
Query: 3410 --KERMNEEPQKEVLLSKLPIADN 3345
K++ E+ ++VL ++ +N
Sbjct: 198 EEKKKKKEDIAEQVLNMQITKEEN 221
>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1342
Score = 266 bits (680), Expect(5) = 0.0
Identities = 142/251 (56%), Positives = 186/251 (74%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GYS + I+ +EVFA ++LAA +N KI M VK AFLNG LEE+VYIEQP
Sbjct: 903 GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQP 962
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
Y VKG E+KVL+LKKALYG+KQAP+AW RID+YFK FIK P+E+ L +K + D
Sbjct: 963 QGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKEANFIKCPYEHALYIKAQGK-D 1021
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
ILIV LYVDDLIFTGNN SMF EFKK+M +FEM D+G M+YYLGIEVKQ +EGIF++Q+
Sbjct: 1022 ILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFITQE 1081
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
+YA +L++F + D + T ++ IKLS+ ++ EKVD T+Y+ L+ +LRYLT TRPDIL
Sbjct: 1082 SYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVDPTLYKSLVGSLRYLTCTRPDIL 1141
Query: 522 YGVGLLSCFID 490
Y VG++S +++
Sbjct: 1142 YAVGVVSRYME 1152
Score = 237 bits (605), Expect(5) = 0.0
Identities = 158/450 (35%), Positives = 227/450 (50%), Gaps = 36/450 (8%)
Frame = -3
Query: 3349 TMKENLGFEEEEATKATNKQEIVVNLMKGQEED*TKISPTQKTHRSFTN-----LADMRG 3185
++++ LG + K K+EIV + K + + + ++ RS++ A G
Sbjct: 186 SIEQLLGSLQAYEEKKKKKEEIVEQVFKAHVDSRKEENAHNQSRRSYSQEQGRGRAYGHG 245
Query: 3184 KSIRNNLNNTASSSDSKCGREI*HNKRERRG*V*CLNCKKYRHYAT*CRHANRRTKNSFC 3005
+ R N NN S ++ N R + + C NC K+ HYA+ CR N+
Sbjct: 246 QGRRPNNNNQRGESSNRGRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKA 305
Query: 3004 TQVEKKEEESAFLLSCNK--EKKEQEAWIMDIAASNHMTGKKDLFVSLNESFKRSTSFGD 2831
E++ +E LL K +K E W +D ASNHM GK+ +FV L+ES K + +FGD
Sbjct: 306 NYAEERCQEDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGD 365
Query: 2830 GRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILSLG---------QLKDGSMTI* 2678
KV V G N+LI NG HQFIS VYYVP++KSNILSLG QLK+ +++I
Sbjct: 366 ESKVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIR 425
Query: 2677 NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCTSYSSWF*GITE*DI*ILIA*NN*LSR 2498
++ ++F+AKV M++N MF L +++D P+CLK+C SW
Sbjct: 426 DNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWL-------------------- 465
Query: 2497 WLMDF-HMLTVQIRCAKVVVMENTLEIVFQRNHT-----QGQHNHSNWYMQTFVAQLIQF 2336
W + F H+ + M L + N G+ ++ ++
Sbjct: 466 WHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPL 525
Query: 2335 HLVRVDI------------SYYL--FDDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SG 2198
L+ D+ +Y+L DDFSRK WVYFLKEKSE F+ F KFK+ VE SG
Sbjct: 526 ELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESG 585
Query: 2197 FSIKALCTDRGGEFTSKTFNNFCESNGIKR 2108
IKAL +DRGGEFTSK F +CE NGI+R
Sbjct: 586 LLIKALRSDRGGEFTSKEFQKYCEDNGIRR 615
Score = 200 bits (508), Expect(5) = 0.0
Identities = 110/236 (46%), Positives = 149/236 (63%), Gaps = 2/236 (0%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
QE W+G KP + HLRVFGS+A+ H+ DE R +LDDKS+K++FIGYD SKGYKL+NP+++
Sbjct: 679 QEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSR 738
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
K ISR+V DEE W W T D+ F P + D +Q P TP P P S
Sbjct: 739 KTIISRNVVFDEEGEWDWSTNCEDHTFFPCV-----EEDDVEQQQQPQETPTTP---PTS 790
Query: 1583 LSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETET-HNISLYCLFIGSELVDFKDAI*DEQ 1407
+ +E SSS R + R L IY TE N++L+CLF E ++F++AI +
Sbjct: 791 PNTTLQDYE----SSSERMPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQEAIGKKS 846
Query: 1406 *IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
+AM EI++I KN+TW+LV LPK IGVKWVYK KK+ +G ++++KA LVAK
Sbjct: 847 WRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAK 902
Score = 191 bits (486), Expect(5) = 0.0
Identities = 92/163 (56%), Positives = 121/163 (74%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
IK T FGL+Y+ S+ +KLVGYSDSDW GD+DD KST+G++ SKKQ I+
Sbjct: 1169 IKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVT 1228
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LSTCEAEYVAAT CV HAI L+NLLK + + Q + T ++VDN S I L KN +FHDR +H
Sbjct: 1229 LSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKH 1288
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
I +R+H+IRECI+ K+V+++Y+K+ DQ+ADI TKPLK E F +
Sbjct: 1289 IHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMK 1331
Score = 71.6 bits (174), Expect(5) = 0.0
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = -1
Query: 2097 VPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
VP SPQQN V ERKNRTIL+M SMLKSK + K F EA+AC+VYL NR TR + K
Sbjct: 619 VPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGK 676
>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1342
Score = 266 bits (679), Expect(5) = 0.0
Identities = 142/251 (56%), Positives = 186/251 (74%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GYS + I+ +EVFA ++LAA +N KI M VK AFLNG LEE+VYIEQP
Sbjct: 903 GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQP 962
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
Y VKG E+KVL+LKKALYG+KQAP+AW RID+YFK FIK P+E+ L +K + D
Sbjct: 963 QGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKEVNFIKCPYEHALYIKAQGK-D 1021
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
ILIV LYVDDLIFTGNN SMF EFKK+M +FEM D+G M+YYLGIEVKQ +EGIF++Q+
Sbjct: 1022 ILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFITQE 1081
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
+YA +L++F + D + T ++ IKLS+ ++ EKVD T+Y+ L+ +LRYLT TRPDIL
Sbjct: 1082 SYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVDPTLYKSLVGSLRYLTCTRPDIL 1141
Query: 522 YGVGLLSCFID 490
Y VG++S +++
Sbjct: 1142 YAVGVVSRYME 1152
Score = 237 bits (605), Expect(5) = 0.0
Identities = 158/450 (35%), Positives = 227/450 (50%), Gaps = 36/450 (8%)
Frame = -3
Query: 3349 TMKENLGFEEEEATKATNKQEIVVNLMKGQEED*TKISPTQKTHRSFTN-----LADMRG 3185
++++ LG + K K+EIV + K + + + ++ RS++ A G
Sbjct: 186 SIEQLLGSLQAYEEKKKKKEEIVEQVFKAHVDSRKEENAHNQSRRSYSQEQGRGRAYGHG 245
Query: 3184 KSIRNNLNNTASSSDSKCGREI*HNKRERRG*V*CLNCKKYRHYAT*CRHANRRTKNSFC 3005
+ R N NN S ++ N R + + C NC K+ HYA+ CR N+
Sbjct: 246 QGRRPNNNNQRGESSNRGRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKA 305
Query: 3004 TQVEKKEEESAFLLSCNK--EKKEQEAWIMDIAASNHMTGKKDLFVSLNESFKRSTSFGD 2831
E++ +E LL K +K E W +D ASNHM GK+ +FV L+ES K + +FGD
Sbjct: 306 NYAEERCQEDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGD 365
Query: 2830 GRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILSLG---------QLKDGSMTI* 2678
KV V G N+LI NG HQFIS VYYVP++KSNILSLG QLK+ +++I
Sbjct: 366 ESKVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIR 425
Query: 2677 NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCTSYSSWF*GITE*DI*ILIA*NN*LSR 2498
++ ++F+AKV M++N MF L +++D P+CLK+C SW
Sbjct: 426 DNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWL-------------------- 465
Query: 2497 WLMDF-HMLTVQIRCAKVVVMENTLEIVFQRNHT-----QGQHNHSNWYMQTFVAQLIQF 2336
W + F H+ + M L + N G+ ++ ++
Sbjct: 466 WHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPL 525
Query: 2335 HLVRVDI------------SYYL--FDDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SG 2198
L+ D+ +Y+L DDFSRK WVYFLKEKSE F+ F KFK+ VE SG
Sbjct: 526 ELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESG 585
Query: 2197 FSIKALCTDRGGEFTSKTFNNFCESNGIKR 2108
IKAL +DRGGEFTSK F +CE NGI+R
Sbjct: 586 LLIKALRSDRGGEFTSKEFQKYCEDNGIRR 615
Score = 200 bits (508), Expect(5) = 0.0
Identities = 110/236 (46%), Positives = 149/236 (63%), Gaps = 2/236 (0%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
QE W+G KP + HLRVFGS+A+ H+ DE R +LDDKS+K++FIGYD SKGYKL+NP+++
Sbjct: 679 QEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSR 738
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
K ISR+V DEE W W T D+ F P + D +Q P TP P P S
Sbjct: 739 KTIISRNVVFDEEGEWDWSTNCEDHTFFPCV-----EEDDVEQQQQPQETPTTP---PTS 790
Query: 1583 LSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETET-HNISLYCLFIGSELVDFKDAI*DEQ 1407
+ +E SSS R + R L IY TE N++L+CLF E ++F++AI +
Sbjct: 791 PNTTLQDYE----SSSERMPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQEAIGKKS 846
Query: 1406 *IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
+AM EI++I KN+TW+LV LPK IGVKWVYK KK+ +G ++++KA LVAK
Sbjct: 847 WRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAK 902
Score = 191 bits (486), Expect(5) = 0.0
Identities = 92/163 (56%), Positives = 121/163 (74%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
IK T FGL+Y+ S+ +KLVGYSDSDW GD+DD KST+G++ SKKQ I+
Sbjct: 1169 IKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVT 1228
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LSTCEAEYVAAT CV HAI L+NLLK + + Q + T ++VDN S I L KN +FHDR +H
Sbjct: 1229 LSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKH 1288
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
I +R+H+IRECI+ K+V+++Y+K+ DQ+ADI TKPLK E F +
Sbjct: 1289 IHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMK 1331
Score = 71.6 bits (174), Expect(5) = 0.0
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = -1
Query: 2097 VPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
VP SPQQN V ERKNRTIL+M SMLKSK + K F EA+AC+VYL NR TR + K
Sbjct: 619 VPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGK 676
>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1331
Score = 266 bits (680), Expect(5) = 0.0
Identities = 142/251 (56%), Positives = 186/251 (74%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GYS + I+ +EVFA ++LAA +N KI M VK AFLNG LEE+VYIEQP
Sbjct: 892 GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQP 951
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
Y VKG E+KVL+LKKALYG+KQAP+AW RID+YFK FIK P+E+ L +K + D
Sbjct: 952 QGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKEANFIKCPYEHALYIKAQGK-D 1010
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
ILIV LYVDDLIFTGNN SMF EFKK+M +FEM D+G M+YYLGIEVKQ +EGIF++Q+
Sbjct: 1011 ILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFITQE 1070
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
+YA +L++F + D + T ++ IKLS+ ++ EKVD T+Y+ L+ +LRYLT TRPDIL
Sbjct: 1071 SYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVDPTLYKSLVGSLRYLTCTRPDIL 1130
Query: 522 YGVGLLSCFID 490
Y VG++S +++
Sbjct: 1131 YAVGVVSRYME 1141
Score = 234 bits (596), Expect(5) = 0.0
Identities = 156/450 (34%), Positives = 225/450 (50%), Gaps = 36/450 (8%)
Frame = -3
Query: 3349 TMKENLGFEEEEATKATNKQEIVVNLMKGQEED*TKISPTQKTHRSFTN-----LADMRG 3185
++++ LG + K K+EIV + K + + + ++ RS++ A G
Sbjct: 175 SIEQLLGSLQAYEEKKKKKEEIVEQVFKAHVDSRKEENAHNQSRRSYSQEQGRGRAYGHG 234
Query: 3184 KSIRNNLNNTASSSDSKCGREI*HNKRERRG*V*CLNCKKYRHYAT*CRHANRRTKNSFC 3005
+ R N NN S ++ N R + + C NC K+ HYA+ CR N+
Sbjct: 235 QGRRPNNNNQRGESSNRGRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKA 294
Query: 3004 TQVEKKEEESAFLLSCNK--EKKEQEAWIMDIAASNHMTGKKDLFVSLNESFKRSTSFGD 2831
E++ +E LL K +K E W +D ASNHM GK+ +FV L+ES K + +FGD
Sbjct: 295 NYAEERCQEDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGD 354
Query: 2830 GRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILSLG---------QLKDGSMTI* 2678
KV V G N+LI NG HQFIS +YYVP++KSNILSLG QLK+ +++I
Sbjct: 355 ESKVAVEGKGNVLIQLKNGEHQFISNIYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIR 414
Query: 2677 NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCTSYSSWF*GITE*DI*ILIA*NN*LSR 2498
++ ++F+ KV M +N MF L +++D P+CLK+C SW
Sbjct: 415 DNTSRFITKVPMMRNRMFVLNIQSDGPQCLKMCYKDQSWL-------------------- 454
Query: 2497 WLMDF-HMLTVQIRCAKVVVMENTLEIVFQRNHT-----QGQHNHSNWYMQTFVAQLIQF 2336
W + F H+ + M L + N G+ ++ ++
Sbjct: 455 WHLRFGHLNFKGLDLLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPL 514
Query: 2335 HLVRVDI------------SYYL--FDDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SG 2198
L+ D+ +Y+L DDFSRK WVYFLKEKSE F+ F KFK+ VE SG
Sbjct: 515 ELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESG 574
Query: 2197 FSIKALCTDRGGEFTSKTFNNFCESNGIKR 2108
IKAL +DRGGEFTSK F +CE NGI+R
Sbjct: 575 LLIKALRSDRGGEFTSKEFQKYCEDNGIRR 604
Score = 200 bits (508), Expect(5) = 0.0
Identities = 110/236 (46%), Positives = 149/236 (63%), Gaps = 2/236 (0%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
QE W+G KP + HLRVFGS+A+ H+ DE R +LDDKS+K++FIGYD SKGYKL+NP+++
Sbjct: 668 QEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSR 727
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
K ISR+V DEE W W T D+ F P + D +Q P TP P P S
Sbjct: 728 KTIISRNVVFDEEGEWDWSTNCEDHTFFPCV-----EEDDVEQQQQPQETPTTP---PTS 779
Query: 1583 LSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETET-HNISLYCLFIGSELVDFKDAI*DEQ 1407
+ +E SSS R + R L IY TE N++L+CLF E ++F++AI +
Sbjct: 780 PNTTLQDYE----SSSERMPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQEAIGKKS 835
Query: 1406 *IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
+AM EI++I KN+TW+LV LPK IGVKWVYK KK+ +G ++++KA LVAK
Sbjct: 836 WRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAK 891
Score = 193 bits (491), Expect(5) = 0.0
Identities = 93/163 (57%), Positives = 122/163 (74%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
IK T FGL+Y+ S+ +KLVGYSDSDW GD+DD KST+G++ SKKQ I+
Sbjct: 1158 IKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVT 1217
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LSTCEAEYVAAT CV HAI L+NLLK + + Q + T ++VDN STI L KN +FHDR +H
Sbjct: 1218 LSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSTIALAKNPVFHDRSKH 1277
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
I +R+H+IRECI+ K+V+++Y+K+ DQ+ADI TKPLK E F +
Sbjct: 1278 IHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMK 1320
Score = 71.6 bits (174), Expect(5) = 0.0
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = -1
Query: 2097 VPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
VP SPQQN V ERKNRTIL+M SMLKSK + K F EA+AC+VYL NR TR + K
Sbjct: 608 VPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGK 665
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 272 bits (696), Expect(5) = 0.0
Identities = 145/251 (57%), Positives = 187/251 (74%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GYS + I+ +EVFA ++LAA + KI M VK AFLNG LEE+VYIEQP
Sbjct: 874 GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 933
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
Y+VKG E+KVL+LKKALYG+KQAP+AW +RID+YFK K+FIK P+E+ L +K++K D
Sbjct: 934 QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKE-D 992
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
ILI LYVDDLIFTGNN SMF EFKKEM +FEM DIG MSYYLGIEVKQ D GIF++Q+
Sbjct: 993 ILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQE 1052
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA +VL++F M D + T ++ IKLS+ ++ E VD T ++ L+ +LRYLT TRPDIL
Sbjct: 1053 GYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDIL 1112
Query: 522 YGVGLLSCFID 490
Y VG++S +++
Sbjct: 1113 YAVGVVSRYME 1123
Score = 218 bits (556), Expect(5) = 0.0
Identities = 156/455 (34%), Positives = 220/455 (48%), Gaps = 41/455 (9%)
Frame = -3
Query: 3349 TMKENLGFEEEEATKATNKQEIVVNLMKGQEED*TKISPTQKTHRSFTNLADMRGKSIRN 3170
T+++ LG + K K++IV ++ Q TK Q R RG+
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIVEQVLNMQI---TKEENGQSYQRRGGGQVRGRGRGGYG 242
Query: 3169 NL--------NNTASSSDSKCGREI*HNK-RERRG*V*CLNCKKYRHYAT*CRHANRRTK 3017
N N +S GR H K R + V C NC K+ HYA+ C+ + +
Sbjct: 243 NGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKF 302
Query: 3016 NSFCTQVEKKEEESAFLLSCNKEKKEQEA---WIMDIAASNHMTGKKDLFVSLNESFKRS 2846
VE+K +E LL + +K EQE W +D ASNHM G+K +F L+ES + +
Sbjct: 303 EEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGN 362
Query: 2845 TSFGDGRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILSLGQ---------LKDG 2693
+ GD K++V G NILI NG HQFIS VYY+P++K+NILSLGQ LKD
Sbjct: 363 VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDN 422
Query: 2692 SMTI*NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCTSYSSWF*GITE*DI*ILIA*N 2513
+++I + E+ + KV MS+N MF L ++ D+ +CLK+C SW
Sbjct: 423 NLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWL--------------- 467
Query: 2512 N*LSRWLMDF-HMLTVQIRCAKVVVMENTLEIVFQRNHT-----QGQHNHSNWYMQTFVA 2351
W + F H+ + M L + N G+ ++ ++
Sbjct: 468 -----WHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSR 522
Query: 2350 QLIQFHLVRVDI------------SYYL--FDDFSRKIWVYFLKEKSEAFDAFMKFKSLV 2213
L+ D+ +Y+L DDFSRK WVYFLKEKSE F+ F KFK+ V
Sbjct: 523 AQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582
Query: 2212 EN*SGFSIKALCTDRGGEFTSKTFNNFCESNGIKR 2108
E SG IK + +DRGGEFTSK F +CE NGI+R
Sbjct: 583 EKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRR 617
Score = 206 bits (524), Expect(5) = 0.0
Identities = 97/163 (59%), Positives = 127/163 (77%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
IK T++FGL Y+ +S +KLVGYSDSDWGGD+DD KST+G++ SKKQ I+
Sbjct: 1140 IKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVT 1199
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LSTCEAEYVAAT CV HAI L+NLLK + + Q++ T +FVDN S I L KN +FHDR +H
Sbjct: 1200 LSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKH 1259
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
ID+R+H+IREC++KK+V+L+Y+K+ DQ+ADI TKPLK EDF +
Sbjct: 1260 IDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1302
Score = 185 bits (469), Expect(5) = 0.0
Identities = 107/235 (45%), Positives = 137/235 (58%), Gaps = 1/235 (0%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
QE W+G KP + HLRVFGS+A++H+ DE R +LDDKS+K++FIGYD SKGYKL+NP+ K
Sbjct: 681 QEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTK 740
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
K ISR++ DEE W W + E DYNF P F ++ P PT E P S P+
Sbjct: 741 KTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDK-----------PEPTREEPPSEEPT 789
Query: 1583 LSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETETHNISLYCLFIGSELVDFKDAI*DEQ* 1404
PT P+SS I C E +DF++AI +
Sbjct: 790 TP--PTS----PTSSQ--------------------IEEKC-----EPMDFQEAIEKKTW 818
Query: 1403 IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
+AM EIKSI KN+TW+L LP K IGVKWVYK KKN +G +E++KA LVAK
Sbjct: 819 RNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAK 873
Score = 68.2 bits (165), Expect(5) = 0.0
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -1
Query: 2097 VPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
VP SPQQN V ERKNRTIL+M SMLKSK + K EA+AC+VYL NR T+ + K
Sbjct: 621 VPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGK 678
Score = 62.4 bits (150), Expect = 8e-06
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Frame = -2
Query: 3569 VWCIVNQLRKYGEKLEDTHVVEKILCSLDKKFNYIVVAIKESRELEAMTIDQL------- 3411
V + N L++ GEKL+D ++EK+L SLD KF +IV I+E+++LEAMTI+QL
Sbjct: 138 VLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAY 197
Query: 3410 --KERMNEEPQKEVLLSKLPIADN 3345
K++ E+ ++VL ++ +N
Sbjct: 198 EEKKKKKEDIVEQVLNMQITKEEN 221
>gb|ACN78973.1| copia-type polyprotein [Glycine max]
gb|ACN78980.1| copia-type polyprotein [Glycine max]
Length = 1042
Score = 266 bits (679), Expect(5) = 0.0
Identities = 131/251 (52%), Positives = 179/251 (71%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GY Q+ ++ +EVFA ++LAA +I VK AFLNGYLEE VY+EQP
Sbjct: 596 GYKQQYEVDYDEVFAPVARMETIRLLISLAAQMKWRIFQFDVKSAFLNGYLEEDVYVEQP 655
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
+V++G E KVLKL KALYG+KQAP+AW + ID+YF+ F+ +EY L VK NGD
Sbjct: 656 MGFVIEGQEGKVLKLNKALYGLKQAPRAWNTHIDKYFQDNGFVHCQNEYALYVKTFNNGD 715
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
+L + LYVDDLIFTGNN ++F +FK+ M +F+M D+G MSYYLG+EVKQ GIF+SQ+
Sbjct: 716 VLFICLYVDDLIFTGNNPNLFEDFKESMSREFDMTDMGLMSYYLGMEVKQTQNGIFVSQE 775
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
Y +VL++FNM DC + T ++ +KLS+FD+ EKVD T+++ L+ +LRYLTNTRPDIL
Sbjct: 776 RYTKEVLKKFNMLDCNPVNTPMEGGLKLSKFDEGEKVDSTIFKSLVGSLRYLTNTRPDIL 835
Query: 522 YGVGLLSCFID 490
Y VG++ F++
Sbjct: 836 YAVGVVCRFME 846
Score = 211 bits (538), Expect(5) = 0.0
Identities = 114/238 (47%), Positives = 155/238 (65%), Gaps = 4/238 (1%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
QE W+G KP + HLRVFGS+AY+H+ D+ R +LDD+S+K VFIGYD SKGYKL+NP N
Sbjct: 372 QEAWSGVKPRVDHLRVFGSIAYAHVPDQGRFKLDDRSEKHVFIGYDASSKGYKLYNPNNG 431
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
K +SRDV+ EE W WE +E Y+F P F ++ ++ T P+ P+
Sbjct: 432 KTIVSRDVEFYEEGTWNWEEKEDTYDFFPYF------EEIDEEALT-------PNDSTPA 478
Query: 1583 LSIRPTKFEFIPS---SSSTRPMKMRRLLNIYAETETHNISLYCLFIGSELVDFKDAI*D 1413
LS P+ E S SSS RP +MR + +Y ETE N L+CLF+ S+ ++F +A+ D
Sbjct: 479 LSPTPSTNEASSSSEGSSSERPRRMRNIQELYDETEVIN-DLFCLFVDSKPLNFDEAMKD 537
Query: 1412 EQ*IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
++ AM EIK+I KNNTW+L LPK + IGVKWV+K+KKN +G +E+ KA LVAK
Sbjct: 538 KRWRQAMEEEIKAIEKNNTWELSSLPKGHEAIGVKWVFKIKKNAKGEVERHKARLVAK 595
Score = 204 bits (520), Expect(5) = 0.0
Identities = 97/163 (59%), Positives = 125/163 (76%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
+K T+DFGLFY+PS+ +KLVG+ DSD+ GD+DD KSTTG++ SKKQ I+
Sbjct: 863 LKGTIDFGLFYSPSNNYKLVGFCDSDFAGDVDDRKSTTGFVFFMGDCVFTWSSKKQGIVT 922
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LSTCEAEYVAAT C HAI L+ LL+ + + Q ++T ++VDN S EL KN +FH+R +H
Sbjct: 923 LSTCEAEYVAATSCTCHAIWLRRLLEELQLLQKESTKIYVDNRSAQELAKNPVFHERSKH 982
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
ID+R+HFIRECI KKEVEL ++K+QDQ+ADI TKPLKFEDF R
Sbjct: 983 IDTRYHFIRECITKKEVELTHVKTQDQVADIFTKPLKFEDFRR 1025
Score = 168 bits (425), Expect(5) = 0.0
Identities = 115/293 (39%), Positives = 150/293 (51%), Gaps = 31/293 (10%)
Frame = -3
Query: 2893 GKKDLFVSLNESFKRSTSFGDGRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILS 2714
G K+ FV L++ K + SFGD KV + G ILI +G+H+ I+ VYYVP LKSNILS
Sbjct: 38 GCKEKFVELDKKVKGNVSFGDSSKVQIQGKGTILISLKDGAHKLITDVYYVPKLKSNILS 97
Query: 2713 LGQL---------KDGSMTI*NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCTSYSSW 2561
LGQL KD + + + + +AKV MS+N MF+L +KT+ +CLK SW
Sbjct: 98 LGQLVEKGYEIHMKDCCLWLRDKNSNLIAKVFMSRNRMFTLNIKTNEAKCLKASIKDESW 157
Query: 2560 F*GITE*DI*ILIA*NN*LSRWLMDFHMLTVQIRCAKVVVMENTLEIVFQRNHTQ----- 2396
W M F L K + E ++ + Q NH
Sbjct: 158 C--------------------WHMRFGHLN--FGALKSLGEEKMVKGMPQINHPNQLCEA 195
Query: 2395 ---GQHNHSNWYMQTFVAQLIQFHLVRVDI------------SYYLF--DDFSRKIWVYF 2267
G+H ++ + LV D+ Y+L DD+SRK WVYF
Sbjct: 196 CLLGKHARRSFPKEANSRAKEPLQLVYTDVCGPINPPSCGNNKYFLLFIDDYSRKTWVYF 255
Query: 2266 LKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTFNNFCESNGIKR 2108
LK+KSEAF AF FK+LVE SG+ IKAL +DRGGEFTSK FN FCE GI+R
Sbjct: 256 LKQKSEAFVAFKNFKALVEKESGYVIKALRSDRGGEFTSKEFNEFCEKYGIRR 308
Score = 71.6 bits (174), Expect(5) = 0.0
Identities = 36/55 (65%), Positives = 43/55 (78%)
Frame = -1
Query: 2097 VPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDM 1933
VP SPQQN V ERKNRTIL+MT MLK+KNM K F EA+AC+VYL NR T+++
Sbjct: 312 VPRSPQQNGVAERKNRTILNMTRCMLKAKNMPKEFWAEAVACAVYLSNRSPTKNV 366
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 266 bits (681), Expect(5) = 0.0
Identities = 142/251 (56%), Positives = 184/251 (73%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GYS + I+ +EVFA ++LAA + KI M K AFLNG EE+VYIEQP
Sbjct: 845 GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQP 904
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
Y+VKG E+KVL+LKKALYG+KQAP+AW +RID+YFK K+FIK P+E+ L +K++K D
Sbjct: 905 QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKE-D 963
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
ILI LYVDDLIFTGNN SMF EFKKEM +FEM DIG MSYYLGIEVKQ D IF++Q+
Sbjct: 964 ILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQE 1023
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA +VL++F M D + T ++ IKLS+ ++ E VD T ++ L+ +LRYLT TRPDIL
Sbjct: 1024 GYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDIL 1083
Query: 522 YGVGLLSCFID 490
Y VG++S +++
Sbjct: 1084 YAVGVVSRYME 1094
Score = 218 bits (554), Expect(5) = 0.0
Identities = 117/238 (49%), Positives = 152/238 (63%), Gaps = 4/238 (1%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
QE W+G KP + HLRVFGS+A++H+ DE R +LDDKS+K++FIGYD SKGYKL+NP+ K
Sbjct: 620 QEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTK 679
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
K ISR++ DEE W W + E DYNF P F ++ P PT E P S P
Sbjct: 680 KTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDE-----------PEPTREEPPSEEP- 727
Query: 1583 LSIRPTKF--EFIPSSSSTRPMKMRRLLNIYAETET-HNISLYCLFIGSELVDFKDAI*D 1413
+ RPT I SSS R + R + +Y TE N++L+CLF E +DF++AI
Sbjct: 728 -TTRPTSLTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEK 786
Query: 1412 EQ*IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
+ +AM EIKSI KN+TW+L LP K IGVKWVYK KKN +G +E++KA LVAK
Sbjct: 787 KTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAK 844
Score = 203 bits (516), Expect(5) = 0.0
Identities = 96/163 (58%), Positives = 126/163 (77%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
IK T++FGL Y+ +S +KLVGYSDSDWG D+DD KST+G++ SKKQ I+
Sbjct: 1111 IKGTVNFGLHYSTTSDYKLVGYSDSDWGRDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVT 1170
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LSTCEAEYVAAT CV HAI L+NLLK + + Q++ T +FVDN S I L KN +FHDR +H
Sbjct: 1171 LSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKH 1230
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
ID+R+H+IREC++KK+V+L+Y+K+ DQ+ADI TKPLK EDF +
Sbjct: 1231 IDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1273
Score = 153 bits (387), Expect(5) = 0.0
Identities = 106/315 (33%), Positives = 155/315 (49%), Gaps = 18/315 (5%)
Frame = -3
Query: 2998 VEKKEEESAFLLSCNKEKKEQEA---WIMDIAASNHMTGKKDLFVSLNESFKRSTSFGDG 2828
VE+K +E LL + +K EQE W +D ASNHM G+K +F L+ES + + + GD
Sbjct: 271 VEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDE 330
Query: 2827 RKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILSLGQ---------LKDGSMTI*N 2675
K++V G NILI NG HQFIS VYY+P++K+NILSLGQ LKD +++I +
Sbjct: 331 SKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRD 390
Query: 2674 SENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCTSYSSWF*GITE*DI*ILIA*NN*LSRW 2495
E+ + KV MS+N MF L ++ D+ +CLK+C SW W
Sbjct: 391 QESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWL--------------------W 430
Query: 2494 LMDF-HMLTVQIRCAKVVVMENTLEIVFQRNHT-----QGQHNHSNWYMQTFVAQLIQFH 2333
+ F H+ + M L + N G+ ++ ++
Sbjct: 431 HLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLE 490
Query: 2332 LVRVDISYYLFDDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFT 2153
L+ D+ + K V+ + +K +A VE SG IK + +DRGGEFT
Sbjct: 491 LIHTDVCGPIKPKSLEKSEVFKIFKKFKAH---------VEKESGLVIKTMRSDRGGEFT 541
Query: 2152 SKTFNNFCESNGIKR 2108
SK F +CE NGI+R
Sbjct: 542 SKEFLKYCEDNGIRR 556
Score = 68.2 bits (165), Expect(5) = 0.0
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = -1
Query: 2097 VPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
VP SPQQN V ERKNRTIL+M SMLKSK + K EA+AC+VYL NR T+ + K
Sbjct: 560 VPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGK 617
Score = 62.8 bits (151), Expect = 6e-06
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Frame = -2
Query: 3569 VWCIVNQLRKYGEKLEDTHVVEKILCSLDKKFNYIVVAIKESRELEAMTIDQL------- 3411
V + N L++ GEKL+D ++EK+L SLD KF +IV I+E+++LEAMTI+QL
Sbjct: 138 VLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAY 197
Query: 3410 --KERMNEEPQKEVLLSKLPIADN 3345
K++ E+ ++VL ++ +N
Sbjct: 198 EEKKKKKEDIVEQVLNMRITKEEN 221
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 262 bits (669), Expect(5) = 0.0
Identities = 133/251 (52%), Positives = 176/251 (70%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GY + ++ +E+FA + +AA + KI M VK AFLNGYLEE+VYIEQP
Sbjct: 925 GYKQRQGVDYDEIFAPVARIDTIRLLIAVAAQYKWKIYQMDVKSAFLNGYLEEEVYIEQP 984
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
Y ++G E+KV +LKK+LYG+KQAP+AW +RIDEYF+ FIKSPHE+ L K GD
Sbjct: 985 PGYSIQGKEDKVYRLKKSLYGLKQAPRAWNTRIDEYFRRNGFIKSPHEHTLYTKKNGYGD 1044
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
I+IV LYVDD+IFTGNN M ++FKK M +FEM DIG MSY+LG+EVKQ +GIF+SQK
Sbjct: 1045 IMIVCLYVDDMIFTGNNPGMSDDFKKAMTKEFEMTDIGEMSYFLGVEVKQMQDGIFVSQK 1104
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA ++L +F MKDC + T D +KLS E ++ T+++ L+ +LRYLT TRPDI
Sbjct: 1105 KYAEQILNKFKMKDCKPVVTPADPGMKLSVDSTRESINPTLFKSLVGSLRYLTITRPDIT 1164
Query: 522 YGVGLLSCFID 490
Y VGL+S F++
Sbjct: 1165 YAVGLVSRFME 1175
Score = 186 bits (472), Expect(5) = 0.0
Identities = 118/366 (32%), Positives = 182/366 (49%), Gaps = 35/366 (9%)
Frame = -3
Query: 3106 RERRG*V*CLNCKKYRHYAT*CRHANR---RTKNSFCTQVEKKEEESAFLLSCNKEKKEQ 2936
+E + V C NC KY H++ CR ++ R + + +K E S FL E +++
Sbjct: 290 QENKSQVQCYNCNKYGHFSYECRSTHKVDERNHVAVAAEGNEKVESSVFLTYGENEDRKR 349
Query: 2935 EAWIMDIAASNHMTGKKDLFVSLNESFKRSTSFGDGRKVDVTGIRNILIISNNGSHQFIS 2756
W +D ASNHM G+K+LF L+E+ +FGD ++ G ++I NG ++IS
Sbjct: 350 SVWYLDNGASNHMCGRKELFTELDETVHGQITFGDNSHAEIKGKGKVVITQRNGEKKYIS 409
Query: 2755 QVYYVPALKSNILSLGQL---------KDGSMTI*NSENKFLAKVKMSQNVMFSLVLKTD 2603
VYYVPALKSN++SLGQL KD S+ I N + + +V M++N +F+L +++
Sbjct: 410 DVYYVPALKSNLISLGQLLEKGYEVHMKDRSLAIRNKSGELVVRVDMTRNRLFTLDIESG 469
Query: 2602 MPRCLKVCTSYSSWF*GITE*DI*ILIA*NN*LSRWLMDF-HMLTVQIRCAKVVVMENTL 2426
+C+K SW W + + H+ ++ M N L
Sbjct: 470 EVKCMKTDLKNESWL--------------------WHLRYGHLGFSGLKLLSKTNMVNGL 509
Query: 2425 EIVFQRNH--------TQGQHNHSNWYMQTFVAQLIQFHLVRVDIS------------YY 2306
+ NH +G+ + + + +V DIS YY
Sbjct: 510 PSI---NHPDQLCEACVKGKQHRQKFEVGKSRRARRPLEIVHTDISGPYDIESLGGNRYY 566
Query: 2305 L--FDDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTFNNF 2132
L DD+SRK WVYFLK KSEA + F +FK++VE SG +K L +DRGGE+T+K + +F
Sbjct: 567 LTFIDDYSRKCWVYFLKAKSEALEKFKEFKAMVEKQSGRYLKILRSDRGGEYTAKLYESF 626
Query: 2131 CESNGI 2114
C+ +GI
Sbjct: 627 CKDHGI 632
Score = 166 bits (421), Expect(5) = 0.0
Identities = 92/239 (38%), Positives = 135/239 (56%), Gaps = 5/239 (2%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
+E W+G KP + HL++FG +AY+H+ ++ R +LDD+ +K +FIGYD +SK Y+L+NP K
Sbjct: 698 EEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRGEKCIFIGYDKRSKAYRLYNPLTK 757
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
K+ ISRDV+ DE W+W +E + ++NQ + P P S S
Sbjct: 758 KLIISRDVEFDEADYWRWSEEEKKVEGLFFNEDDNNQEEQGDDQSPGTTAPSSPTSSSGS 817
Query: 1583 LSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETE----THNISLYCLFIGSELVDFKDAI* 1416
SS P + R L +IY TE + SL+CL + V +++AI
Sbjct: 818 ------------SSLDEAPTRTRSLNDIYNSTEPVETQFDYSLFCLMTECDPVTYEEAIE 865
Query: 1415 DEQ*IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
+ + AM EI +I +N+TW+L LP+ IGVKWVYK K N+ G +EK+KA LVAK
Sbjct: 866 NNKWKKAMDEEIAAIRRNDTWELTSLPEGHSPIGVKWVYKTKTNKEGKVEKYKARLVAK 924
Score = 163 bits (413), Expect(5) = 0.0
Identities = 83/161 (51%), Positives = 107/161 (66%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
IK T++ GLFY S KLVGYSDSD+GGD+DD KST+GY SKKQ I
Sbjct: 1192 IKGTMNHGLFYTHSQDSKLVGYSDSDYGGDLDDRKSTSGYAFHISSAVFSWSSKKQQTIA 1251
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LSTCEAEY+AA C A+ LKN+L + +S + ++VDN S I L KN + H R +H
Sbjct: 1252 LSTCEAEYMAAATCTCQAMWLKNILGEIGVSNEGPITIYVDNKSAISLAKNPVSHSRSKH 1311
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDF 9
ID+++HFIRE + K VEL + +++DQ+ADI TKPLK E F
Sbjct: 1312 IDTKYHFIREQVKNKNVELVHCRTEDQLADIFTKPLKVETF 1352
Score = 59.7 bits (143), Expect(5) = 0.0
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = -1
Query: 2088 SPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
+PQQN V ERKNRTILDM SM+K K++ + F EA+ C+VYL N+ T+ + K
Sbjct: 641 TPQQNGVAERKNRTILDMARSMIKGKHLPRTFWAEAVECAVYLLNQCPTKSVRHK 695
Score = 65.5 bits (158), Expect = 9e-07
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 11/89 (12%)
Frame = -2
Query: 3560 IVNQLRKYGEKLEDTHVVEKILCSLDKKFNYIVVAIKESRELEAMTIDQL---------K 3408
+VN++++ GE L++ V+EKIL SL +KF Y+VVAI+ES++L M++++L K
Sbjct: 143 VVNEMKRNGETLDEVRVMEKILRSLTRKFEYVVVAIEESKDLSKMSLEELVGSLQAHEQK 202
Query: 3407 ERMNEEPQ--KEVLLSKLPIADNERKSRF 3327
++NE+ + + L SKL I D E + F
Sbjct: 203 MKLNEDSENLNQALHSKLSIDDGETSNNF 231
>gb|KYP66838.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1317
Score = 202 bits (513), Expect(7) = 0.0
Identities = 106/251 (42%), Positives = 162/251 (64%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
G+ + I+ +EVFA V LA+ N K+ + VK AFLNG L+E V+I QP
Sbjct: 874 GFMQREGIDYSEVFAPVARLETVRLIVALASWRNWKLWQLDVKSAFLNGPLDEDVFIVQP 933
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
++ KG E KVLKL+KALYG+KQAP+AW R+D + + F K E+G+ VKM +
Sbjct: 934 PGFISKGNEQKVLKLRKALYGLKQAPRAWNKRVDTFLHSVGFQKCSVEHGVYVKMVSSTK 993
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
ILI+ LYVDDL+ TGN+++ K+ ++ +FEM D+G +SY+LG+E ++GIFM QK
Sbjct: 994 ILIICLYVDDLLITGNSSADIESLKQSLKKEFEMTDLGILSYFLGLEFAYTEKGIFMHQK 1053
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
Y +VL+ FNM C T + KL+R ++ VD T++R+++ +LR++ ++RP+I
Sbjct: 1054 KYISEVLKRFNMMGCNPAETPAEINGKLTRSENEASVDGTLFRQIVGSLRFICHSRPEIA 1113
Query: 522 YGVGLLSCFID 490
+ VGL+S F++
Sbjct: 1114 FSVGLVSRFMN 1124
Score = 140 bits (354), Expect(7) = 0.0
Identities = 85/235 (36%), Positives = 130/235 (55%), Gaps = 1/235 (0%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
+E W+GSKPS+ H R+FGS+ Y H+ D+ R +LDDKS+ +F+GY+ + YKL+NP+ K
Sbjct: 651 EEAWSGSKPSVKHFRIFGSLCYRHVPDQRRKKLDDKSEPMIFVGYN-STGSYKLYNPKTK 709
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
++ SRDV DE W E+Q L Q D + N T E + + +
Sbjct: 710 QVLFSRDVYFDESNSWS-ESQSKIETVSKL------QFDWEENNSIGETTQETMNDVCRT 762
Query: 1583 LSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETETHNISLYCLFIGSELVDFKDAI*DEQ* 1404
+ RPT+ + PS S + +++ + H L E + +AI ++
Sbjct: 763 VENRPTRNKNFPSRLSDYQVYPDNAISVDGDLVQH----LALMADVEPISLDEAITSKEW 818
Query: 1403 IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVK-KNERGLEKFKA*LVAK 1242
AM E++SI KN+TW++V+LP+NK I VKWV+K+K K + + K KA LVAK
Sbjct: 819 RSAMEEELRSIEKNHTWEMVELPQNKTPIDVKWVFKIKLKPDGSVAKHKARLVAK 873
Score = 134 bits (338), Expect(7) = 0.0
Identities = 67/165 (40%), Positives = 105/165 (63%), Gaps = 4/165 (2%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSK----FKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQ 324
+K TL +G+ ++ +K +LV YSDSDW GD+ D +ST G + SKKQ
Sbjct: 1141 LKGTLGYGIMFSHQTKEDDGLRLVAYSDSDWCGDLVDRRSTMGQVFLFSGSPISWSSKKQ 1200
Query: 323 AIIILSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHD 144
+++LSTCEAEY+AA A+ L +LL + +S D + VD+ S I+L KN + H
Sbjct: 1201 TVVVLSTCEAEYIAACSAACQALWLSSLLSELKVSVDSGVELLVDSKSAIDLAKNPVSHG 1260
Query: 143 RIQHIDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDF 9
R +HID+++HF+R+ ++K ++LK+ +++ Q+ADI+TK LK E F
Sbjct: 1261 RSKHIDTKYHFLRDQVSKGRIKLKHCRTEVQLADIMTKSLKIERF 1305
Score = 96.3 bits (238), Expect(7) = 0.0
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 24/234 (10%)
Frame = -3
Query: 3190 RGKSIRNNLNNTASSSDSKCGREI*HNKRERRG*V*CLNCKKYRHYAT*CRHANRRTK-- 3017
RGK N N ++ K +++ KR + C NC + H++ C A RT
Sbjct: 210 RGKESSNRKGNFSNWRGGK--KKVIDRKRIK-----CFNCNRIGHFSAECEAAPGRTDQR 262
Query: 3016 -----NSFCTQVEKKEEES-------AFLLSCNKEKKEQEAWIMDIAASNHMTGKKDLFV 2873
+ + + K+E E+ ++ N E + E W +D SNHMTG +D V
Sbjct: 263 GSQSHSDYQAHMAKEESEANSEEQPLMLMMITNPESHKNETWYIDSGCSNHMTGYRDWLV 322
Query: 2872 SLNESFKRSTSFGDGRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILSLGQLKD- 2696
+ + K + F D R + G N+L+ +G I+ V YVP +KSN +S+GQL +
Sbjct: 323 NFDAKKKSTVRFADNRVIQAEGTGNVLVTRQDGRQAVIADVLYVPGMKSNFISMGQLLEK 382
Query: 2695 --------GSMTI*NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCT-SYSSW 2561
G + I ++ + + K +++N F + L T +CL T S +W
Sbjct: 383 GFSMNMVCGFLEIYDTTKRMIMKAPLAKNRTFKVSLNTVESQCLSAATLSDDAW 436
Score = 75.9 bits (185), Expect(7) = 0.0
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = -2
Query: 2558 LRHHRIGHLNFDSLK*L-AKQMAYGLPHVDCPDQMCEGCSYGKYFRNSFPKESHSRAAQP 2382
L H R+GHLNF + L +K+M GLP + P ++C+ C K R SF + S+A++
Sbjct: 437 LWHLRLGHLNFRDMSLLKSKEMLTGLPSIKIPKKVCDSCLISKQPRKSFSNFTTSKASKI 496
Query: 2381 LQLVHADICSPIDPVSLGKSRYFLLFI 2301
L +V++D+C PID SLG +RYF+ F+
Sbjct: 497 LHVVYSDVCGPIDTPSLGGNRYFVSFV 523
Score = 72.0 bits (175), Expect(7) = 0.0
Identities = 34/62 (54%), Positives = 42/62 (67%)
Frame = -3
Query: 2299 DDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTFNNFCESN 2120
DD SRK+W+Y +K KS+ F F +FK+LVE S IK L TD GGEFTS F FC+ +
Sbjct: 524 DDLSRKVWLYLIKAKSDVFSIFKEFKALVEKQSEKCIKILRTDGGGEFTSGEFEGFCKEH 583
Query: 2119 GI 2114
GI
Sbjct: 584 GI 585
Score = 53.1 bits (126), Expect(7) = 0.0
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 2094 PSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMD 1930
P +PQ N + ER+NRTIL+M SMLK KN+ F EA +VY+ NR T+ +D
Sbjct: 592 PYTPQHNGIAERRNRTILNMVRSMLKEKNLPHSFWGEAAMTAVYVLNRCPTKRLD 646
>gb|PNX96991.1| retrotransposon-related protein [Trifolium pratense]
Length = 1333
Score = 187 bits (476), Expect(7) = e-176
Identities = 101/250 (40%), Positives = 152/250 (60%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
G+ + ++ +EVF+ + LA + + VK AFLNG LEE VY++QP
Sbjct: 887 GFLQKQGLDYDEVFSPVARHETIRLVIALACSRRWPLFHLDVKSAFLNGPLEEDVYVKQP 946
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
+ +KG +KVLKL KALYG+KQAP+AW RID + + F K EYG+ +K +
Sbjct: 947 PGFELKGKGDKVLKLHKALYGLKQAPRAWNKRIDSFLAMQGFKKCSVEYGVYMKCSNDNH 1006
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
++I+ LYVDDL+ TG++ FK +M+ +FEM D+G ++Y+LG+E+ +G+ + Q
Sbjct: 1007 MVIICLYVDDLLVTGSSPIDIENFKSQMKNEFEMTDLGKLTYFLGMELLDTPKGMVLHQA 1066
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA ++L++F M +C S T D +K + VD TM+R+LI +LRYL TRPDI
Sbjct: 1067 KYASEILKKFEMLECNSSITPADTKLKNEEDGIGDTVDPTMFRQLIGSLRYLCQTRPDIN 1126
Query: 522 YGVGLLSCFI 493
Y VG +S F+
Sbjct: 1127 YAVGYVSRFM 1136
Score = 144 bits (363), Expect(7) = e-176
Identities = 90/248 (36%), Positives = 133/248 (53%), Gaps = 14/248 (5%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
+E+W+ SKPS+ HL+VFGS+ Y H+ D R +LDDKS+ +F+GY ++ Y+L+NP
Sbjct: 650 EEVWSKSKPSVAHLKVFGSLCYKHVPDARRKKLDDKSEAMIFVGYH-RTGAYRLYNPITN 708
Query: 1763 KIAISRDVKVDEEACWKWETQEH-------------DYNFIPLFPKNSNQNDVYKQNFTP 1623
K+ ISRDVKV E+ W W+ + + N P+ N NQ + +
Sbjct: 709 KVEISRDVKVLEDENWDWKQKSSSKKTYAVDLDDGLNVNNEPVTFVNQNQGAISDEEMHT 768
Query: 1622 FPTPEHPHSIPPSLSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETETHNISLYCLFIGSE 1443
E + +PP RP + +P R + +L A +I Y + +E
Sbjct: 769 SSDDEDAN-LPP----RPQRQTQLP-----RRLADCEMLQDNAVNSEGDIVHYAMLANTE 818
Query: 1442 LVDFKDAI*DEQ*IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEK 1266
++ DA+ + ++AM E+KSI KN TW+L LP +KK I VKWVYK K+N G + K
Sbjct: 819 PINVSDALKSKVWLEAMNEELKSIEKNKTWELCMLPADKKAIDVKWVYKAKQNPEGKVIK 878
Query: 1265 FKA*LVAK 1242
KA LVAK
Sbjct: 879 HKARLVAK 886
Score = 124 bits (311), Expect(7) = e-176
Identities = 65/166 (39%), Positives = 105/166 (63%), Gaps = 3/166 (1%)
Frame = -2
Query: 491 IKDTLDFGLFYA---PSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQA 321
I T+ +G+ + S+K +LVG+SD+DW GD + KST+GY+ SKKQ+
Sbjct: 1154 INGTIHYGVLFPYSNDSTKLELVGFSDADWCGDKIERKSTSGYIFKFQNAPVSWCSKKQS 1213
Query: 320 IIILSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDR 141
+I LS+CEAEYVA ++ A L++LL M++ + + +DN S I L KN + H +
Sbjct: 1214 VIALSSCEAEYVAGSMAACQANWLQSLLSEMNIIDNITVVLKLDNKSAINLAKNPVSHGK 1273
Query: 140 IQHIDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
+HI++RFH++R+ +NK ++ L+Y + +Q ADILTK +K + F +
Sbjct: 1274 SKHIETRFHYLRDQVNKGKLNLEYCSTNNQQADILTKAVKRDQFLK 1319
Score = 91.3 bits (225), Expect(7) = e-176
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 18/221 (8%)
Frame = -3
Query: 3184 KSIRNNLNNTASSSDSKCGREI*HNKRER--RG*V*CLNCKKYRHYAT*CRHANRRTKN- 3014
K ++N + SS+ G++ K++ + + C NC K+ HYA C A+++ K
Sbjct: 210 KKDKDNDEDKPESSNGGGGKQKKQFKKKTTDKSHIQCYNCSKFGHYANQCT-ASKKNKTQ 268
Query: 3013 ------SFCTQVEKKEEESAFLLSCNKEKKEQEAWIMDIAASNHMTGKKDLFVSLNESFK 2852
+ + +++ +F+++ E W D SNHMTG +++ ++
Sbjct: 269 QGDEEANVAENTDSDDDDVSFMVTITDEIAGSMEWYFDTGCSNHMTGNRNILTDFDKCVN 328
Query: 2851 RSTSFGDGRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILSLGQ---------LK 2699
D +D GI N++I NG I V YVP++K N++S+GQ L+
Sbjct: 329 TKIKLADSNSIDAKGIGNVVIQRKNGKKCVIENVLYVPSMKCNLMSVGQLLDKGFKVYLE 388
Query: 2698 DGSMTI*NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCT 2576
DG++ + +S+ + K S+N F L+ CL T
Sbjct: 389 DGALQLLDSKRNLILKSAQSKNRTFKTQLRAIEYECLTATT 429
Score = 80.1 bits (196), Expect(7) = e-176
Identities = 38/62 (61%), Positives = 44/62 (70%)
Frame = -3
Query: 2299 DDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTFNNFCESN 2120
D+FSR W+Y +K KS+AFD F KFK+LVE SG SIK L TD GGE+TS F NFC
Sbjct: 523 DEFSRMTWLYHIKAKSDAFDVFKKFKALVEKQSGKSIKVLRTDGGGEYTSTEFENFCTEQ 582
Query: 2119 GI 2114
GI
Sbjct: 583 GI 584
Score = 76.6 bits (187), Expect(7) = e-176
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = -2
Query: 2558 LRHHRIGHLNFDSLK*L-AKQMAYGLPHVDCPDQMCEGCSYGKYFRNSFPKESHSRAAQP 2382
L H R GHLNF SL L +K M GLP V P + C C GK R+SF R++
Sbjct: 436 LWHKRYGHLNFKSLSKLNSKNMVLGLPSVIAPVETCTTCLLGKQPRDSFKNYLPMRSSDV 495
Query: 2381 LQLVHADICSPIDPVSLGKSRYFLLFI 2301
L +VH+DIC PID +S G ++YF+ F+
Sbjct: 496 LNIVHSDICGPIDVLSTGGNKYFITFV 522
Score = 53.1 bits (126), Expect(7) = e-176
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = -1
Query: 2094 PSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
P +PQ N + ER+NR+IL+M SM+K K + K F EA++ +VYL NR T+ ++ K
Sbjct: 591 PYTPQHNGLAERRNRSILNMARSMVKQKQLPKRFWAEAVSTAVYLLNRCPTKRLNEK 647
>emb|CAH67713.1| H0512B01.8 [Oryza sativa]
Length = 1454
Score = 211 bits (538), Expect(7) = e-171
Identities = 110/251 (43%), Positives = 162/251 (64%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
G+ Q I+ +EVFA + +AA + M VK AFLNG L E+VY++QP
Sbjct: 1007 GFVQQPGIDFDEVFAPVARMESIRLLLAVAAQKGWHVHHMDVKSAFLNGDLAEEVYVKQP 1066
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
+VV G E+KVL+L+KALYG++QAP+AW +++D K F +S HE+ + + G
Sbjct: 1067 PGFVVAGEEDKVLRLRKALYGLRQAPRAWNAKLDCTLKELGFDQSKHEHAM-YRRNNGGS 1125
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
L+V +YVDDL+ TG +T +FK+EM+ KF+M D+G +S+YLGIEVKQ D+GI ++Q
Sbjct: 1126 ALLVGVYVDDLVITGPSTRAIEQFKEEMKAKFQMSDLGLLSFYLGIEVKQGDDGISLNQG 1185
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA +++E +KDC T ++ +KLSR VD T YRRL+ +LRYL +TRPD+
Sbjct: 1186 RYAQRIVESAGLKDCNPCATPMEERLKLSRDSTAPPVDATKYRRLVGSLRYLVHTRPDLA 1245
Query: 522 YGVGLLSCFID 490
+ VG +S F++
Sbjct: 1246 FAVGFVSRFME 1256
Score = 126 bits (317), Expect(7) = e-171
Identities = 70/164 (42%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Frame = -2
Query: 491 IKDTLDFGLFYA-PSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAII 315
+ T+++GL Y + +L+GYSDSD GDID +ST+G L S KQ ++
Sbjct: 1273 VAGTMEYGLHYKREKEEQRLIGYSDSDLAGDIDTRRSTSGMLFFLDSSLVSWQSIKQRVV 1332
Query: 314 ILSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQ 135
LS+CEAEYVAAT I L LL + Q KA + VD+ S + L KN +FH+R +
Sbjct: 1333 ALSSCEAEYVAATNAATQGIWLARLLGELLGKQPKAIELKVDSKSALALAKNPVFHERSK 1392
Query: 134 HIDSRFHFIRECINKKEVELKYIKSQDQIADILTKPL---KFED 12
HID R+HFIR+C+ + + +I + DQ+ADILTK L KF++
Sbjct: 1393 HIDLRYHFIRDCLEEGSINASFITTMDQLADILTKALGRVKFQE 1436
Score = 119 bits (297), Expect(7) = e-171
Identities = 89/271 (32%), Positives = 131/271 (48%), Gaps = 35/271 (12%)
Frame = -2
Query: 1940 EIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENKK 1761
E W G KP + LR FG +AY +++R +LDD+S VFIGY+ K Y++ +P ++
Sbjct: 741 EAWHGKKPMVSFLRTFGCLAYVKELNDVR-KLDDRSTPGVFIGYEEGVKAYRVLDPRTRR 799
Query: 1760 IAISRDVKVDEEACWKWETQ-------------EHDYNFIPLFPKNSNQNDVYKQNFTPF 1620
+ ++RDV DE W W E+ P S V + +P
Sbjct: 800 VRLARDVIFDESRGWDWTAASGTDARLSSDFAIEYHVEKTTGHPIPSVGGGVVTPSASPT 859
Query: 1619 P----TPEHPHSIPPSLSIRPTKF--------EFIPSSSSTRPMKMRRLLNIYAET---- 1488
P +P P + PS S+ PT+F E I ++ S P++ R + N+ E
Sbjct: 860 PLQETSPATPATPAPSPSVAPTEFVSPPSHDEERIDAAHSNTPVRYRTVDNLIGENAPAP 919
Query: 1487 -----ETHNISLYCLFIGSELVDFKDAI*DEQ*IDAMYAEIKSIHKNNTWDLVDLPKNKK 1323
E SL G E F +A D+ AM E+ ++++N W+LVDLP +
Sbjct: 920 GIAQRELEEASLLLAGPG-EPCSFAEAEGDDAWRAAMREEMDAVNRNGIWELVDLPHGHR 978
Query: 1322 VIGVKWVYKVKKNERG-LEKFKA*LVAKVIV 1233
IG+KWVYK+KKNE G + K KA LVA+ V
Sbjct: 979 PIGLKWVYKLKKNEAGKVVKHKARLVARGFV 1009
Score = 103 bits (257), Expect(7) = e-171
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Frame = -3
Query: 2986 EEESAFLLSCNKEKKEQEAWIMDIAASNHMTGKKDLFVSLNESFKRSTSFGDGRKVDVTG 2807
E+ L + ++EAW +D A+NHMTG+ D+F L+ S + FGD VD+ G
Sbjct: 375 EQRVQVSLGATDAEDKEEAWYLDTGATNHMTGRGDVFAELDRSVTGTVKFGDSSIVDIKG 434
Query: 2806 IRNILIISNNGSHQFISQVYYVPALKSNILSLGQL---------KDGSMTI*NSENKFLA 2654
N++ NG H+ +S VYY+P LKS+I+S+GQL +DG M I + + LA
Sbjct: 435 AGNVIFTGKNGEHKVLSGVYYIPRLKSSIISIGQLDESETRVLVEDGIMRIWDRRRRLLA 494
Query: 2653 KVKMSQNVMFSLVLKTDMPRCLKVCTSYSSW 2561
K+K ++ ++ L L+ P CL +W
Sbjct: 495 KIKRGRSRLYVLRLEVARPICLATRHDDVAW 525
Score = 79.3 bits (194), Expect(7) = e-171
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = -2
Query: 2552 HHRIGHLNFDSLK*LAKQ-MAYGLPHVDCPDQMCEGCSYGKYFRNSFPKESHSRAAQPLQ 2376
+ R GH++F SL+ + +Q + GLP ++ +Q+C+ C K+ R +FPK + RA +PL
Sbjct: 528 YERFGHIHFGSLEKMGRQELVRGLPRLEHVEQLCDTCVITKHRRAAFPKAAKYRAQEPLD 587
Query: 2375 LVHADICSPIDPVSLGKSRYFLLFI 2301
LVH DIC PI P + G RYFLL +
Sbjct: 588 LVHGDICGPITPATPGGRRYFLLLV 612
Score = 53.5 bits (127), Expect(7) = e-171
Identities = 29/68 (42%), Positives = 35/68 (51%)
Frame = -3
Query: 2305 LFDDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTFNNFCE 2126
L DD +R +WV L KS A DA K + E G + TD GGEFTS F +C
Sbjct: 611 LVDDATRYMWVALLAAKSNAPDAIKKIQMAAETHYGRKLCVFRTDNGGEFTSLEFAAYCT 670
Query: 2125 SNGIKRFF 2102
GI+R F
Sbjct: 671 DEGIQRHF 678
Score = 48.5 bits (114), Expect(7) = e-171
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = -1
Query: 2103 FIVPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
F P +PQQN VVER+N+T++ M ++LK + M F EA++ +V+L N T+ + K
Sbjct: 678 FSAPYAPQQNGVVERRNQTVVSMARALLKQRGMPAEFWGEAVSTAVFLLNCAPTKSLTGK 737
>dbj|GAU44417.1| hypothetical protein TSUD_100640 [Trifolium subterraneum]
Length = 1318
Score = 204 bits (518), Expect(7) = e-170
Identities = 104/250 (41%), Positives = 160/250 (64%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
G+ + ++ NEVFA V + + + + VK AFLNG L+E+VY++QP
Sbjct: 871 GFLQKQGLDFNEVFAPVARLETIRLVVAITSYRGWSMHQLDVKSAFLNGPLDEEVYVKQP 930
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
S+ +KG E KV KLKK LYG+KQAP++W ID + +FIK E+G+ VK N D
Sbjct: 931 PSFEIKGQEEKVFKLKKTLYGLKQAPRSWNKTIDSFLIKLDFIKCTSEHGVYVKGSNNED 990
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
++++ LYVDDL+ TG+N ++ +FK ++ +FEM D+G +SY+LG+E + +G F+ QK
Sbjct: 991 LILLCLYVDDLLITGSNKNILQKFKTDIMREFEMSDLGELSYFLGMEFVKTSKGYFLHQK 1050
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
Y +L+ F+M +C T ++ +KLS+ + E VD T+Y+++I +LRYL NTR DI
Sbjct: 1051 KYVEDILKRFHMSNCNPAITPMETGLKLSKITNEELVDSTLYKQIIGSLRYLCNTRIDIC 1110
Query: 522 YGVGLLSCFI 493
+ VGLLS F+
Sbjct: 1111 HSVGLLSRFM 1120
Score = 131 bits (330), Expect(7) = e-170
Identities = 67/143 (46%), Positives = 90/143 (62%)
Frame = -2
Query: 452 SSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIIILSTCEAEYVAATV 273
S K K GYSDSDWGGD DD KST GYL KKQ I+ LS+CEAEYVAA+
Sbjct: 1155 SVKLKAYGYSDSDWGGDQDDRKSTAGYLFMLGNSPISWCLKKQGIVALSSCEAEYVAASF 1214
Query: 272 CVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQHIDSRFHFIRECIN 93
A ++ LL + + + VDN S I+L N + H R +HI+ RFHF+R+ +N
Sbjct: 1215 AACQANWIEMLLSELKAVEVTMMKLLVDNKSAIDLANNPVSHGRSKHIERRFHFLRDQVN 1274
Query: 92 KKEVELKYIKSQDQIADILTKPL 24
K+++EL+Y ++ Q+ADILTKP+
Sbjct: 1275 KEKLELEYCNTEIQLADILTKPM 1297
Score = 96.3 bits (238), Expect(7) = e-170
Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 13/183 (7%)
Frame = -3
Query: 3082 CLNCKKYRHYAT*C--RHANRRTKNS--FCTQVEKKEEESAFLLSCNKEKKEQEAWIMDI 2915
C NC+ Y HYA C + R K+ F +S + N E + W +D
Sbjct: 274 CYNCQNYGHYARECNSKKVERGDKDEAQFANGGGSDSNDSLLMAITNSEVDKSNLWYLDT 333
Query: 2914 AASNHMTGKKDLFVSLNESFKRSTSFGDGRKVDVTGIRNILIISNNGSHQFISQVYYVPA 2735
SNHMTG K F+ L+ S +RS F D +V G+ +L+ +G I++V YVP+
Sbjct: 334 GCSNHMTGNKKWFLKLDHSVRRSIKFADNSQVIYAGMGTVLVKRKDGHESVINEVLYVPS 393
Query: 2734 LKSNILSLGQL--KDGSMTI*NSE-------NKFLAKVKMSQNVMFSLVLKTDMPRCLKV 2582
+ SN++SLGQL KD +M + N E ++ + K +S N F + + CL
Sbjct: 394 MTSNLISLGQLLEKDYTMKLENRELKIYDAKSRLILKAPLSNNRTFKIEINVIDHHCLAS 453
Query: 2581 CTS 2573
T+
Sbjct: 454 ITN 456
Score = 95.5 bits (236), Expect(7) = e-170
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Frame = -2
Query: 1940 EIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENKK 1761
E WTG KPS+ H R+FGS+++ H+ D++R +LDD+S+ V +GY +P
Sbjct: 677 EAWTGMKPSVNHFRIFGSLSFRHVPDQVRRKLDDRSQPMVLLGY----------HPTGTS 726
Query: 1760 IAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPSL 1581
S + ++E + + E++ N +P N N + +++ T E +P
Sbjct: 727 SMPSTKLVLEETINEQVDVAENNQNNLP----NGEPNQMLRRS-----TRER---VP--- 771
Query: 1580 SIRPTKFEFIPSSSSTRPMKMRRLLNIYAETETHNISLYCLFIGSELVDFKDAI*DEQ*I 1401
S+R ++ P A TE + + E V A+ D
Sbjct: 772 SVRLDGYDVFPDQ---------------AITEAGELVNEAMIAELEPVTLDQALNDSNWK 816
Query: 1400 DAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
AM E+KSI KNNTW+L+ +K+ I VKW++K+K G + K+KA LVAK
Sbjct: 817 AAMVEELKSIEKNNTWELMHNTVSKRPIDVKWLFKLKMKPNGEIAKYKARLVAK 870
Score = 83.6 bits (205), Expect(7) = e-170
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = -2
Query: 2552 HHRIGHLNFDSLK*L-AKQMAYGLPHVDCPDQMCEGCSYGKYFRNSFPKESHSRAAQPLQ 2376
HHR GHLNF SL L +K M +GLP + P ++CE C K RNSF E ++ L+
Sbjct: 464 HHRFGHLNFKSLSMLNSKDMVHGLPQIKTPSEVCEDCCAAKQTRNSFKNELPMKSTHKLE 523
Query: 2375 LVHADICSPIDPVSLGKSRYFLLFI 2301
+V++D+C P + S+G + YFL FI
Sbjct: 524 MVYSDVCGPFEVKSIGGNNYFLTFI 548
Score = 75.5 bits (184), Expect(7) = e-170
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = -3
Query: 2314 SYYL--FDDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTF 2141
+Y+L DD++R +W+Y +++KSE F F KFKSLVE SG +K L TD GGE+TS F
Sbjct: 542 NYFLTFIDDYTRHVWLYLIEKKSEVFTKFKKFKSLVEKQSGCDLKKLRTDGGGEYTSLEF 601
Query: 2140 NNFCESNGI 2114
FCE GI
Sbjct: 602 AKFCEDEGI 610
Score = 50.8 bits (120), Expect(7) = e-170
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = -1
Query: 2094 PSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDM 1933
P +PQ N V ERKNR+I++M SMLK KNM F EA + +V++ NR T+ +
Sbjct: 617 PYTPQHNGVAERKNRSIMNMARSMLKGKNMPHRFWGEATSTAVHIINRSPTKKL 670
>gb|PNX93875.1| copia-type polyprotein [Trifolium pratense]
Length = 1350
Score = 200 bits (508), Expect(5) = e-166
Identities = 103/251 (41%), Positives = 159/251 (63%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
G+ + I+ EVFA +A ++ + M VK AFLNG ++E+VY+ QP
Sbjct: 904 GFLQREGIDYGEVFAPVTRMETIRLVTAIANINDWPMYQMDVKSAFLNGPIDEEVYVAQP 963
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
+ VK E+KV +LKKALYG+KQAP+AW R+D++ F K E+G+ VK
Sbjct: 964 PGFKVKNQESKVYRLKKALYGLKQAPRAWNKRMDKFLIEIGFEKCVTEHGVYVKKSDTKG 1023
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
I+++ LYVDDL+ TG+N S EFK +++ +FEM D+G M+Y+LGIE + +GI M Q
Sbjct: 1024 IIVMCLYVDDLLITGSNDSYIGEFKSDLKKEFEMTDLGHMTYFLGIEFVRTKQGILMHQS 1083
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA ++L++F+M C S + + ++LS ++ +D T+YR++I +LRYL NTRPD+
Sbjct: 1084 KYASEILKKFDMDKCNSALSPAEPRLQLSSSENENDIDPTLYRKIIGSLRYLCNTRPDLT 1143
Query: 522 YGVGLLSCFID 490
Y VG++S F++
Sbjct: 1144 YSVGIVSRFME 1154
Score = 149 bits (376), Expect(5) = e-166
Identities = 91/241 (37%), Positives = 130/241 (53%), Gaps = 7/241 (2%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
+E W+G+KPS+ HLRVFGS+AY H+ D+LR +LDDK+ + +GY + GYKL++P N
Sbjct: 686 EESWSGNKPSVKHLRVFGSIAYKHVPDQLRRKLDDKATMMILVGYH-STGGYKLYDPTNN 744
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
+ +SRDV +DE W W T+E K+N T E + S
Sbjct: 745 NVVVSRDVVIDEMKEWDWHTKE-------------------KRNSTSIMLDEFEDNNEAS 785
Query: 1583 LSIRPTKFEFIPSSSSTRPMKMRRLLNIYAETETHNIS-----LYCLFIG-SELVDFKDA 1422
S T E STRP + L Y + + ++ ++ F+ SE +D A
Sbjct: 786 TS---TAAETADPRRSTRPRNLPPRLQDYELNQDNQVNDDGDLVHLAFMAESEPIDVDSA 842
Query: 1421 I*DEQ*IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVA 1245
+ E+ AM E+ SI N+TW+LVDLP K+ I VKWVYK+K N +G + + KA LVA
Sbjct: 843 LRSEKWRCAMKEELDSIESNHTWELVDLPYRKRAIDVKWVYKLKVNSKGEITRHKARLVA 902
Query: 1244 K 1242
K
Sbjct: 903 K 903
Score = 148 bits (374), Expect(5) = e-166
Identities = 105/358 (29%), Positives = 153/358 (42%), Gaps = 35/358 (9%)
Frame = -3
Query: 3082 CLNCKKYRHYAT*CRHANRRTKNSFCTQVEKKEEESAFLLSCNKEKKE-QEAWIMDIAAS 2906
C NC+KY H+A CR +E S L+ +E+ E + W +D S
Sbjct: 288 CYNCQKYGHFADECRSKEETNDAEAKLARNDDDEGSVMLMVTTREEGECSDQWYLDTGCS 347
Query: 2905 NHMTGKKDLFVSLNESFKRSTSFGDGRKVDVTGIRNILIISNNGSHQFISQVYYVPALKS 2726
HM+G+KD F+SL + F + ++V GI ++ I +G H IS V Y+P +K
Sbjct: 348 THMSGRKDWFISLKTTQNNQVKFANDSTMNVKGIGDVSIKRRDGKHAVISSVLYIPGMKC 407
Query: 2725 NILSLGQLKDGS---------MTI*NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCTS 2573
N+LS+GQL + + + ++ L K MS+N F + L +CL +S
Sbjct: 408 NLLSVGQLLEKEYKIVMEHKLLNVLDTRGNLLLKAPMSKNRTFKVQLNVMKHKCLMTASS 467
Query: 2572 YSSWF*GITE*DI*ILIA*NN*LSRW-----LMDFHMLTVQIR------CAKVVVMENTL 2426
W W ++F LTV R K+ + E
Sbjct: 468 REEWL--------------------WHYRMGHLNFKDLTVMQRQNMVTGLPKIEMPEEMC 507
Query: 2425 EIVFQRNHTQGQHNHSNWYMQTFVAQLIQFHLVRVDI------------SYYL--FDDFS 2288
E Q QH HS + +V D+ Y++ DDFS
Sbjct: 508 EDCIQSK----QHRHS-FSKDALSKTKSVLEVVYSDVCGPMQVDSIGGNKYFVSFIDDFS 562
Query: 2287 RKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTFNNFCESNGI 2114
RK+W Y + +KS+ D F KFK VE SG+ +K L TD GGE+ S F FC+S GI
Sbjct: 563 RKMWTYLISKKSDVLDVFKKFKLTVERQSGYKLKTLRTDGGGEYVSTEFAKFCDSEGI 620
Score = 135 bits (340), Expect(5) = e-166
Identities = 75/168 (44%), Positives = 104/168 (61%), Gaps = 5/168 (2%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSK---FKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQA 321
+K TL G+ + S + KLVGY+DS+W GDI+D KST GY+ SKK+
Sbjct: 1171 VKGTLGVGILFPASDRNKQCKLVGYTDSNWCGDIEDRKSTAGYIFYFGEAPISWCSKKEP 1230
Query: 320 IIILSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVF--VDNTSTIELGKNLIFH 147
++ LS+CEAEY+AA++ AI LKNL++ +SQDK V +DN S I L KN I H
Sbjct: 1231 VVALSSCEAEYIAASLSTCQAIWLKNLIE--ELSQDKCESVTLRIDNVSAINLAKNPISH 1288
Query: 146 DRIQHIDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDFAR 3
+ +HI+ RFH++RE +N + L Y KS+DQ+AD+LTK F R
Sbjct: 1289 GKSKHIELRFHYLREQVNNGNLCLDYCKSEDQLADLLTKATAVNVFQR 1336
Score = 49.3 bits (116), Expect(5) = e-166
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = -1
Query: 2100 IVPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMD 1930
I P +PQQN ER+NRTI++M MLK K++ K EA++ + Y NR T+ +D
Sbjct: 625 IPPYTPQQNGSAERRNRTIMNMVRCMLKGKHLPKELWGEAVSTATYTLNRCPTKRLD 681
>dbj|GAU23361.1| hypothetical protein TSUD_334080 [Trifolium subterraneum]
Length = 1322
Score = 206 bits (523), Expect(5) = e-165
Identities = 112/251 (44%), Positives = 161/251 (64%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GYS Q I+ NEVFA ++LAA N + + VK AFL+G L E VY++QP
Sbjct: 880 GYSQQQGIDYNEVFAPVARWDTIRTILSLAASQNWSVYQLDVKSAFLHGELVENVYVDQP 939
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
Y K + KV KLKKALYG+KQAP+AWYS+I+ YF ++F K P+E+ L VK K
Sbjct: 940 LGYQ-KEEKGKVYKLKKALYGLKQAPRAWYSKIESYFGQEKFEKCPYEHTLFVKRNKE-K 997
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
+LIVSLYVDDLI+TGN+ MFN FK M+ KF M D+G M ++LG+EV Q + GIF++Q+
Sbjct: 998 LLIVSLYVDDLIYTGNDVEMFNNFKDSMQKKFAMTDLGKMRFFLGVEVTQGEFGIFINQQ 1057
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
Y ++L F M+ C + + + KL + ++ VD T Y++++ L YL TRPD+
Sbjct: 1058 KYVKEILSRFGMEACNMVCSPMVPGNKLMKDEEGSAVDSTKYKQMVGCLMYLLATRPDLA 1117
Query: 522 YGVGLLSCFID 490
+ V L++ +++
Sbjct: 1118 FSVCLIARYME 1128
Score = 144 bits (362), Expect(5) = e-165
Identities = 93/256 (36%), Positives = 135/256 (52%), Gaps = 22/256 (8%)
Frame = -2
Query: 1943 QEIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENK 1764
+E W+GSKP+++H R+FG +AY HI D R +LDDKS K + +G +SKGYKL++P NK
Sbjct: 636 EEAWSGSKPTVHHFRIFGCLAYVHIPDFNRKKLDDKSIKCILLGLSEESKGYKLYDPVNK 695
Query: 1763 KIAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
++ +S+DV +E W W K+ Q D+ + T H I P
Sbjct: 696 RVIVSKDVVFEESKGWNWNNDS----------KSQKQIDI--TSTTDEGNSNEDHEIVPD 743
Query: 1583 LSIRPTKFEFIPSSSSTRPM------------KMRR---LLNIYA-----ETETHNISLY 1464
+ FE +SS M +++R LN Y + ET ++
Sbjct: 744 DEVSDEGFEANNNSSPETDMTGESTDSEELTPRVKRKPGYLNDYVTGEELDEETQHLQNL 803
Query: 1463 CLFIGSE-LVDFKDAI*DEQ*IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKK 1287
+F E ++ +AI + AM EI+SI +N+TW+LV LP K IGVKW+YK K
Sbjct: 804 AMFSTKEDPTNYDEAIKNGVWKKAMDQEIESIERNDTWELVTLPAGAKKIGVKWIYKTKY 863
Query: 1286 NERG-LEKFKA*LVAK 1242
NE+G +EK+KA LVAK
Sbjct: 864 NEKGEVEKYKARLVAK 879
Score = 144 bits (362), Expect(5) = e-165
Identities = 68/161 (42%), Positives = 108/161 (67%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
+K +++ G+ Y ++ +L G++DSD+ GD++D KST+GY+ SKKQ I+
Sbjct: 1145 LKGSMNLGILYKRNTTQELKGWTDSDYAGDLNDRKSTSGYVFKVGSSAISWSSKKQPIVT 1204
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LST EAE+VAA C + LK +L + +QDK+T ++ DNTS+I+L KN + H R +H
Sbjct: 1205 LSTTEAEFVAAASCACQGVWLKRILHQLGQTQDKSTIIYCDNTSSIKLSKNPVMHGRCKH 1264
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDF 9
ID R++F+R+ + +ELK+ +++QIADI+TKPLK + F
Sbjct: 1265 IDVRYYFLRDLVKDDVLELKHCNTEEQIADIMTKPLKLDSF 1305
Score = 137 bits (346), Expect(5) = e-165
Identities = 104/357 (29%), Positives = 146/357 (40%), Gaps = 32/357 (8%)
Frame = -3
Query: 3082 CLNCKKYRHYAT*CRHANRRTKNSFCTQVEKKEEESAFLLSCNKEKKEQEAWIMDIAASN 2903
C C K HY C + N + EE + E W +D SN
Sbjct: 242 CYRCHKLGHYQHECPTWEEKDANY--AAYDSHEEILLMAKHGIETDARDEVWFLDSGCSN 299
Query: 2902 HMTGKKDLFVSLNESFKRSTSFGDGRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSN 2723
HM G ++ +++ + S GD ++ + G N+ + G Q IS VYY+P LK+N
Sbjct: 300 HMVGTREWLFDFDDNIRESVKLGDDSRMQILGKGNLKLCIG-GITQVISDVYYIPGLKNN 358
Query: 2722 ILSLGQLKDGSMTI*---------NSENKFLAKVKMSQNVMFSLVLKTDMPRCLKVCTSY 2570
+LS+GQL+ +TI + + + KMS N M+ + +P CLK
Sbjct: 359 LLSIGQLQQKDLTIVFKQDFCKVYHPQRGLIMATKMSANRMYIIYAPVIIPMCLKTVKMD 418
Query: 2569 SS--WF*GITE*DI*ILIA*NN*LSRWLMDFHMLTVQIRCAKV-------VVMENTLEIV 2417
++ W + F L ++ V EN +
Sbjct: 419 NNELWHCRYGH-----------------LSFKGLNTLVKKDMVRGLPQLQETTENCTNCM 461
Query: 2416 FQRNHTQGQHNHSNWYMQTFVAQLIQFHLVRVDIS------------YYLF--DDFSRKI 2279
+ H + SNW + LV DI Y++ DDFSRK
Sbjct: 462 TGKQHREAIPKSSNWRASK------KLELVHSDICGPITPQSNGGIRYFMTFTDDFSRKT 515
Query: 2278 WVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTFNNFCESNGIKR 2108
W Y L +K+ AFD F KFK LVE S I L TDRGGEFTS FN FC ++GIKR
Sbjct: 516 WTYLLSDKASAFDVFKKFKVLVEKESNCQIMCLRTDRGGEFTSNNFNEFCSNHGIKR 572
Score = 48.1 bits (113), Expect(5) = e-165
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = -1
Query: 2088 SPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYST 1942
+PQQN V ERKNRT+L+M SM+ +N+ K F EA+ S Y+ NR T
Sbjct: 579 TPQQNGVSERKNRTLLNMIRSMMAGRNVPKSFWPEALKWSTYVLNRSPT 627
>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 182 bits (463), Expect(7) = e-164
Identities = 102/251 (40%), Positives = 149/251 (59%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GY + ++ EVFA + +AA ++ + VK AFLNG LEE+VY+ QP
Sbjct: 983 GYVQRQGVDFEEVFAPVARLDTVRVILAIAADRRWEVHHLDVKSAFLNGDLEEEVYVAQP 1042
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
+V +G E+ VL+L KALYG++QAP+AW +R+D+ K F + E + + +
Sbjct: 1043 EGFVKRGEEHLVLRLSKALYGLRQAPRAWNTRLDKCLKELGFARCTQEQAVYTRGKGQAG 1102
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
+ IV +YVDDLI TG N FK++M +FEM D+G +SYYLGIEV Q + GI + Q
Sbjct: 1103 V-IVGVYVDDLIVTGENPQEIAMFKQQMMGEFEMSDLGLLSYYLGIEVIQGENGIAIKQA 1161
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA K+L +F M+ C + ++ L + D +D T YRR+I LRYL +TRPD+
Sbjct: 1162 AYAKKILSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTRPDLS 1221
Query: 522 YGVGLLSCFID 490
Y VG+ S F++
Sbjct: 1222 YAVGVASRFME 1232
Score = 129 bits (323), Expect(7) = e-164
Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSS-KFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAII 315
+K TLD GL +A S + G++DSD GD+DD +ST G S+KQ +
Sbjct: 1249 LKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTV 1308
Query: 314 ILSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQ 135
LS+CEAE++AAT HA+ L+ LL M ++ K +FVDN S I L KN +FH R +
Sbjct: 1309 ALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKPVKLFVDNKSAIALMKNPVFHGRSK 1368
Query: 134 HIDSRFHFIRECINKKEVELKYIKSQDQIADILTKPL 24
HID+R+HFIREC+ ++ ++++ S++Q AD +TK L
Sbjct: 1369 HIDTRYHFIRECVESGQILIEFVSSEEQRADAMTKGL 1405
Score = 114 bits (285), Expect(7) = e-164
Identities = 88/277 (31%), Positives = 125/277 (45%), Gaps = 44/277 (15%)
Frame = -2
Query: 1940 EIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENKK 1761
E WTG KP L HLRVFG +A++ I + +LDD+S +V++G + SK ++LF+P +
Sbjct: 709 EAWTGRKPQLGHLRVFGCIAHAKITTPNQKKLDDRSAPYVYLGVEEGSKAHRLFDPRCGR 768
Query: 1760 IAISRDVKVDEEACWKWETQEHDYNFI----------------------------PLFPK 1665
I +SRDV +E W+W + N P P+
Sbjct: 769 IHVSRDVIFEENVPWQWSVVAGEQNSTEFTVEEDGVDAPPAGAPAYPVPRYRAPSPAVPQ 828
Query: 1664 NSNQNDVYKQNFTPFPTPEHPHSIPPSL----SIRPTKFEFIPSS-----SSTRPMKMRR 1512
+ + V P P S PPS S+ P P S S P++ R
Sbjct: 829 SPLASPVGASPSLPTSPQSSPSSTPPSTPATGSVGPVA---SPGSSGDLRSDEGPVRFRS 885
Query: 1511 LLNIYAE------TETHNISLYCLFIGSELVDFKDAI*DEQ*IDAMYAEIKSIHKNNTWD 1350
L +I E E + L E +++A +AM E+++I KN+TW
Sbjct: 886 LEDIMREAPRVDLVEDEHDGDALLAEMEEPSSYREAAGQPAWENAMAQELQAIEKNSTWA 945
Query: 1349 LVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
L LP K IG+KWVYK+KKN G + K KA LVAK
Sbjct: 946 LTALPAGHKPIGLKWVYKLKKNTAGEVIKHKARLVAK 982
Score = 86.3 bits (212), Expect(7) = e-164
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Frame = -3
Query: 3082 CLNCKKYRHYAT*CRHANRRTKNSFCTQVEKK---------EEESAFLLSCNKEK----- 2945
C NC+++ HY+T C H ++ + Q + E+E A L ++E+
Sbjct: 289 CYNCEEFGHYSTQCPHPKKKKVEAHLAQTDDANPALLLAVTEDEPASGLVVHEERVWPQL 348
Query: 2944 -------KEQEAWIMDIAASNHMTGKKDLFVSLNESFKRSTSFGDGRKVDVTGIRNILII 2786
+ W +D ASNHMTG + F L+ S S FGD V + G +IL
Sbjct: 349 LLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFS 408
Query: 2785 SNNGSHQFISQVYYVPALKSNILSLGQLKDGSMTI*NSEN----------KFLAKVKMSQ 2636
NG + V+Y+P+L N++SLGQL + + E+ + + +V+ +
Sbjct: 409 CKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTP 468
Query: 2635 NVMFSLVLKTDMPRCLKVCTSYSSW 2561
N ++ + LK P CL +W
Sbjct: 469 NRLYRIELKLATPVCLLTRMDEPAW 493
Score = 85.9 bits (211), Expect(7) = e-164
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = -2
Query: 2558 LRHHRIGHLNFDSLK*LA-KQMAYGLPHVDCPDQMCEGCSYGKYFRNSFPKESHSRAAQP 2382
L H R+GH+NF ++K LA K MA G+P + P+Q+C+ C K R FP ++ RA +P
Sbjct: 494 LWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIRQPFPATANFRAEEP 553
Query: 2381 LQLVHADICSPIDPVSLGKSRYFLLFI 2301
L+L+H D+C PI P ++ +RYF+L +
Sbjct: 554 LELLHIDLCGPITPTTMAGNRYFMLIV 580
Score = 71.6 bits (174), Expect(7) = e-164
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = -3
Query: 2305 LFDDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTFNNFCE 2126
+ DDFSR +W++ +K K +A +AF KFK L EN +G IK L +DRGGEF S F CE
Sbjct: 579 IVDDFSRWMWMFVIKTKDQALEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCE 638
Query: 2125 SNGIKR 2108
GI+R
Sbjct: 639 QAGIQR 644
Score = 48.5 bits (114), Expect(7) = e-164
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -1
Query: 2094 PSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDM 1933
P SPQQN VVER+NR+++ M S++K ++ F EA+ +VYL NR T+ M
Sbjct: 649 PYSPQQNGVVERRNRSVMAMARSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAM 702
>gb|PNX98468.1| putative copia-type polyprotein, partial [Trifolium pratense]
Length = 1267
Score = 207 bits (526), Expect(7) = e-164
Identities = 107/265 (40%), Positives = 169/265 (63%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
G+ +H ++ NEVFA V +A+ + + VK AFLNG L+E+VY++QP
Sbjct: 897 GFLQKHGLDYNEVFAPVARLETIRLVVAVASYRGWTMHQLDVKSAFLNGPLDEEVYVKQP 956
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
+ +KG E+KV +L+KALYG+KQAP+AW RID + +F K E G+ VK N D
Sbjct: 957 PGFEIKGQEHKVFRLRKALYGLKQAPRAWNKRIDSFLIKLKFTKCTSENGVYVKGTSNED 1016
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
++I+ LYVDDL+ TG+N ++ +FK ++ +FEM D+G +SY+LG+E + +G F+ QK
Sbjct: 1017 LIILCLYVDDLLITGSNKNVLEKFKVDIMKEFEMSDLGELSYFLGMEFVKTSKGFFLHQK 1076
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA +L F+M +C + T ++ +KLS+ + E VD T+Y+++I +LRYL NTR D+
Sbjct: 1077 KYAEDILRRFHMNNCNAAITPMETGLKLSKDTNEELVDSTLYKQIIGSLRYLCNTRIDLC 1136
Query: 522 YGVGLLSCFID*RHSRFWLVLRTLL 448
+ VGLLS F+ + + ++ +L
Sbjct: 1137 HSVGLLSRFMSEPRANHLIAVKRIL 1161
Score = 123 bits (309), Expect(7) = e-164
Identities = 81/236 (34%), Positives = 120/236 (50%), Gaps = 3/236 (1%)
Frame = -2
Query: 1940 EIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENKK 1761
E WTG KPS+ HLR+FGS+++ H+ ++ R +LDD+S++ + +GY + YKL++P+ K
Sbjct: 677 EAWTGLKPSVNHLRIFGSLSFRHVPEQNRRKLDDRSQQMILLGYH-PTGAYKLYSPKENK 735
Query: 1760 IAISRDVKVDEEACWKW-ETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPS 1584
+ ISRD+K DE W W E N + + DV P + S
Sbjct: 736 VVISRDIKFDESKGWDWIEGSSSMPNTELVLEEIDETGDVQDILTNDEPNQQLRRSTRER 795
Query: 1583 L-SIRPTKFEFIPSSSSTRPMKMRRLLNIYAETETHNISLYCLFIGSELVDFKDAI*DEQ 1407
+ S R FE P + T A+ + N ++ E V A+ D +
Sbjct: 796 VQSTRLNNFEIFPDQAIT------------ADGDLFNEAMIAEL---EPVTLDQALNDSK 840
Query: 1406 *IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
AM E+KSI KN TW+L+ NK+ I VKWV+K+K G + K+KA LVAK
Sbjct: 841 WRAAMQEELKSIEKNKTWELMHNAVNKRPIDVKWVFKLKMKPNGEIAKYKARLVAK 896
Score = 100 bits (248), Expect(7) = e-164
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 14/221 (6%)
Frame = -3
Query: 3181 SIRNNLNNTASSSDSKCGREI*HNKRERRG*V*CLNCKKYRHYAT*C--RHANRRTKNS- 3011
S +N+ N SS ++ K +++ V C NC+K+ HYA C + +R K+
Sbjct: 242 SSKNSKNQAGESSKGNQNKKNFKKKVDKKD-VQCYNCQKHGHYARECHSKKVDRDDKDEA 300
Query: 3010 -FCTQVEKKEEESAFLLSCNKEKKEQEAWIMDIAASNHMTGKKDLFVSLNESFKRSTSFG 2834
F + ++S + N + + W +D SNHMTG K F+ L++S +RS F
Sbjct: 301 QFANGGGSESDDSLLMAITNSDADKSNLWYLDTGCSNHMTGNKKWFLKLDDSVRRSIKFA 360
Query: 2833 DGRKVDVTGIRNILIISNNGSHQFISQVYYVPALKSNILSLGQL--KDGSMTI*NSE--- 2669
D +++ G+ + ++ +G I++V YVP++ SN++SLGQL K M++ N E
Sbjct: 361 DNSQIESAGMGTVSVMRKDGHESVINEVLYVPSMTSNLISLGQLLEKGYEMSMANRELKI 420
Query: 2668 ----NKFLAKVKMSQNVMFSLVLKTDMPRCLKVCT-SYSSW 2561
++ + K +S N F + CL + T S +W
Sbjct: 421 YDAKSRLILKAPLSNNRTFKAEINVIDHHCLSLITNSEENW 461
Score = 87.0 bits (214), Expect(7) = e-164
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = -2
Query: 2552 HHRIGHLNFDSLK*L-AKQMAYGLPHVDCPDQMCEGCSYGKYFRNSFPKESHSRAAQPLQ 2376
HHR GHLNF SL L +K M +GLP + P ++C C K RNSF + H ++AQ L+
Sbjct: 464 HHRYGHLNFKSLSMLQSKDMVHGLPQIKAPSEVCGECCAAKQARNSFKSDLHMKSAQKLE 523
Query: 2375 LVHADICSPIDPVSLGKSRYFLLFI 2301
+V++D+C P + S+G + YFL FI
Sbjct: 524 MVYSDVCGPFEEKSIGGNNYFLTFI 548
Score = 75.5 bits (184), Expect(7) = e-164
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Frame = -3
Query: 2314 SYYL--FDDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTF 2141
+Y+L DD++R +W+Y +++KS+ F F KFK+LVE SG S+K L TD GGE+TS F
Sbjct: 542 NYFLTFIDDYTRHVWLYLIEKKSDVFTKFKKFKTLVEKHSGCSVKKLRTDGGGEYTSHEF 601
Query: 2140 NNFCESNGI 2114
FCE GI
Sbjct: 602 AKFCEDEGI 610
Score = 70.5 bits (171), Expect(7) = e-164
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = -2
Query: 452 SSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIIILSTCEAEYVAATV 273
S K + GYSDSDWGGD DD KST GYL SKKQ I+ LS+CEAEYVAA+
Sbjct: 1181 SVKLRAYGYSDSDWGGDKDDRKSTAGYLFMLGNSPISWCSKKQDIVALSSCEAEYVAASF 1240
Query: 272 CVYHAI*LKNLL 237
A L+ LL
Sbjct: 1241 AACQANWLEMLL 1252
Score = 53.9 bits (128), Expect(7) = e-164
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -1
Query: 2094 PSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDMDWK 1924
P +PQ N V ERKNR+I++M SMLK+KNM F EA + +VY+ NR T+ + K
Sbjct: 617 PYTPQHNGVAERKNRSIMNMARSMLKAKNMPHKFWGEATSTAVYIINRSPTKKLQEK 673
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 212 bits (540), Expect(5) = e-162
Identities = 110/250 (44%), Positives = 161/250 (64%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GYS Q ++ +E F+ + LAA + + VK AFLNG LEE+VY+ QP
Sbjct: 887 GYSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQP 946
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
+++ G ENKV KL+KALYG+KQAP+AWYS+ID +F+ F +S +E L +K + +
Sbjct: 947 QGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDE 1006
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
L+V LYVDD+I+ G++ S+ N+FK M FEM D+G + Y+LG+EV Q +GIF+SQK
Sbjct: 1007 FLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQK 1066
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA +L++F M +C TT ++ KL R D EK + ++R L+ L YLT+TRPDI
Sbjct: 1067 KYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIA 1126
Query: 522 YGVGLLSCFI 493
+ V ++S F+
Sbjct: 1127 FSVSVVSRFL 1136
Score = 149 bits (376), Expect(5) = e-162
Identities = 110/361 (30%), Positives = 164/361 (45%), Gaps = 28/361 (7%)
Frame = -3
Query: 3106 RERRG*V*CLNCKKYRHYAT*C--RHANRRTKNSFCTQVEKKEEESAFLLSCNKEKKEQE 2933
R+ + + C CKK+ H C + + + +F VE EE F+ S +
Sbjct: 252 RQYKSNIQCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVE--EESKLFMASSQITESANA 309
Query: 2932 AWIMDIAASNHMTGKKDLFVSLNESFKRSTSFGDGRKVDVTGIRNILIISNNGSHQFISQ 2753
W +D SNHM+ K LF L+ES K GD ++V + G + I + G+ +F+
Sbjct: 310 VWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLYD 369
Query: 2752 VYYVPALKSNILSLGQLKDGSMTI*NSEN----------KFLAKVKMSQNVMFSLVLKT- 2606
V YVP L N+LS+GQL ++ +N + +A+V M+QN MF L +
Sbjct: 370 VQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDISNV 429
Query: 2605 -DMPRCLKVCTSYSSWF*GITE*DI*ILIA*NN*LSRWLMDFHMLTVQIRCAKVVVMENT 2429
+ +K + W L ++ + L + ++ V+ + N
Sbjct: 430 GNSALVVKEKNETNLWH-----------------LRYGHLNVNWLKLLVQKDMVIGLPNI 472
Query: 2428 LEIVFQRNHTQGQHNHSNWYMQTFVAQLIQFHLVRVDIS------------YYLF--DDF 2291
E+ G+ ++ + LV D+ Y+L DD+
Sbjct: 473 KELDLCEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDY 532
Query: 2290 SRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTFNNFCESNGIK 2111
SR WVYFLK KSE F+ F KFK+ VEN SG IK+L TDRGGEF S FN FCE NGI+
Sbjct: 533 SRFSWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIR 592
Query: 2110 R 2108
R
Sbjct: 593 R 593
Score = 137 bits (346), Expect(5) = e-162
Identities = 85/237 (35%), Positives = 132/237 (55%), Gaps = 4/237 (1%)
Frame = -2
Query: 1940 EIWTGSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENKK 1761
E W G KP + HLR+FG +AY+ ++ +LD+KS K +F+GY L+SK Y+L+NP + K
Sbjct: 658 EAWNGKKPRVSHLRIFGCIAYALVN--FHSKLDEKSTKCIFVGYSLQSKAYRLYNPISGK 715
Query: 1760 IAISRDVKVDEEACWKWETQEHDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHS-IPPS 1584
+ ISR+V +E+ W + + N I L P + + + P S I PS
Sbjct: 716 VIISRNVVFNEDVSWNFNSGNMMSN-IQLLPTDEESAVDFGNSPNSSPVSSSVSSPIAPS 774
Query: 1583 LSIRP--TKFEFIPSSSSTRPMKMRRLLNIYAETETHNISLYCLFIGSELVDFKDAI*DE 1410
++ P + E IP STR K + T N S + S+ + +++A+
Sbjct: 775 TTVAPDESSVEPIPLRRSTREKKPNPKYS-----NTVNTSCQFALLVSDPICYEEAVEQS 829
Query: 1409 Q*IDAMYAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
+ +AM EI++I +N+TW+LVD P+ K VIG+KWV++ K N G ++K KA LVAK
Sbjct: 830 EWKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAK 886
Score = 122 bits (306), Expect(5) = e-162
Identities = 63/156 (40%), Positives = 93/156 (59%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
+ T DFG++Y+ + F+LVG++DSD+ G +DD KST+G SKKQ +
Sbjct: 1154 VAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSGVVTWSSKKQETVA 1213
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
LST EAEY AA++ A+ L+ LL+ Q ++T +F D+ S I + KN FH R +H
Sbjct: 1214 LSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTEIFSDSKSAIAMAKNPSFHGRTKH 1273
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPL 24
ID ++HFIR + + LK+ + +Q ADI TK L
Sbjct: 1274 IDVQYHFIRTLVADGRIVLKFCSTNEQAADIFTKSL 1309
Score = 49.3 bits (116), Expect(5) = e-162
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -1
Query: 2094 PSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAIACSVYLCNRYSTRDM 1933
P +P+QN V ERKNRT+++M S LK+K + F EA+A VY N T+D+
Sbjct: 598 PYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDV 651
>dbj|GAU26309.1| hypothetical protein TSUD_56070 [Trifolium subterraneum]
Length = 1071
Score = 218 bits (556), Expect(7) = e-162
Identities = 120/255 (47%), Positives = 164/255 (64%)
Frame = -1
Query: 1242 GYS*QHRINCNEVFAXXXXXXXXXXXVTLAA*HNCKI**MGVKFAFLNGYLEEKVYIEQP 1063
GYS ++ + FA V L+A + K + VK AFLNG L+E++Y+EQP
Sbjct: 627 GYSQMAGVDYGDTFASVARHETIRLIVALSAQNGWKFFHLDVKSAFLNGVLQEEIYVEQP 686
Query: 1062 SSYVVKGGENKVLKLKKALYGMKQAPKAWYSRIDEYFKTKEFIKSPHEYGLCVKMRKNGD 883
+ ++V G E+KV +L KALYG+KQAP+AWYSRID +F +F +S +E L VK NG
Sbjct: 687 TGFIVSGHEDKVYRLYKALYGLKQAPRAWYSRIDSHFLENDFKRSQNEPTLYVKDYGNGK 746
Query: 882 ILIVSLYVDDLIFTGNNTSMFNEFKKEMRTKFEMIDIG*MSYYLGIEVKQYDEGIFMSQK 703
LIVSLYVDDL+ TG++ + N FKK M FEM D+G M Y+LG+E+ Q D+GIF+SQ+
Sbjct: 747 RLIVSLYVDDLLVTGDDINAINNFKKSMLQAFEMTDLGEMKYFLGMELYQLDDGIFLSQR 806
Query: 702 NYAMKVLEEFNMKDC*SITTTVDHAIKLSRFDDIEKVDLTMYRRLIRNLRYLTNTRPDIL 523
YA VL++F ++ C ++T + KLS+ D K D+T YR LI L YLT TRPD++
Sbjct: 807 KYANDVLKKFKLESCKPVSTPLAVNEKLSKDDGDVKADVTQYRSLIGCLLYLTATRPDLM 866
Query: 522 YGVGLLSCFID*RHS 478
+ LLS F RHS
Sbjct: 867 FSASLLSRF---RHS 878
Score = 130 bits (326), Expect(7) = e-162
Identities = 81/231 (35%), Positives = 118/231 (51%), Gaps = 2/231 (0%)
Frame = -2
Query: 1928 GSKPSLYHLRVFGSVAYSHIDDELRHRLDDKSKKFVFIGYDLKSKGYKLFNPENKKIAIS 1749
G KPS HL++FGS+ Y+H+ R +LDDK++ +F GY SKGY+++N + K+I IS
Sbjct: 429 GVKPSAKHLKIFGSICYAHVPAAKRSKLDDKAEMGIFWGYASSSKGYRVYNLKTKQIVIS 488
Query: 1748 RDVKVDEEACWKWETQE-HDYNFIPLFPKNSNQNDVYKQNFTPFPTPEHPHSIPPSLSIR 1572
RD+ VDE A W WE E + + NQ + ++
Sbjct: 489 RDLDVDENAYWNWENNEVQNCELKSTSSASDNQQNAANED-------------------- 528
Query: 1571 PTKFEFIPSSSSTRPMKMRRLLNIYAETETHNISLYCLFIGSELVDFKDAI*DEQ*IDAM 1392
E+ + S + +K + L IY C F+ +E F++A + DAM
Sbjct: 529 ----EYEITESDSPVLKTKSLAEIYEN---------CNFVVNEPSCFEEASMLTEWKDAM 575
Query: 1391 YAEIKSIHKNNTWDLVDLPKNKKVIGVKWVYKVKKNERG-LEKFKA*LVAK 1242
E+ +I+KN TW+L PK+K VIGVKWVY+ K N G + K KA LV K
Sbjct: 576 KEELLAINKNGTWELTPRPKDKNVIGVKWVYRTKLNPDGSIHKHKARLVVK 626
Score = 122 bits (305), Expect(7) = e-162
Identities = 68/161 (42%), Positives = 94/161 (58%)
Frame = -2
Query: 491 IKDTLDFGLFYAPSSKFKLVGYSDSDWGGDIDDPKSTTGYLXXXXXXXXXXXSKKQAIII 312
IK T DFG++Y S KL G+ DSDW G +DD KSTTGY+ SKKQ ++
Sbjct: 894 IKGTSDFGIWYNKSDG-KLEGFVDSDWAGSVDDSKSTTGYVFSLGSGVFSWNSKKQDVVA 952
Query: 311 LSTCEAEYVAATVCVYHAI*LKNLLKMMHMSQDKATGVFVDNTSTIELGKNLIFHDRIQH 132
S+ EAEY+AA AI +K +L ++ Q + ++ DN S I + KN I H R +H
Sbjct: 953 QSSAEAEYIAAAAASNQAIWIKKVLTDLNHGQMEPIVLWCDNKSAISIAKNPIQHGRTKH 1012
Query: 131 IDSRFHFIRECINKKEVELKYIKSQDQIADILTKPLKFEDF 9
I+ +FH IRE +V+L + S++Q+ADILTK L F
Sbjct: 1013 INVKFHVIREAEKNGDVQLMHCSSEEQLADILTKALPSAKF 1053
Score = 74.7 bits (182), Expect(7) = e-162
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = -2
Query: 2558 LRHHRIGHLNFDSLK*L-AKQMAYGLPHVDCPDQMCEGCSYGKYFRNSFPKESHSRAAQP 2382
L H R GH N ++LK L + M +P ++C D +C C GK R SF + +RA
Sbjct: 235 LWHKRYGHFNMNALKFLQSHDMVKDMPPINCIDDLCNACQLGKMHRKSFQSANGTRARNK 294
Query: 2381 LQLVHADICSPIDPVSLGKSRYFLLFI 2301
L+LVH ++C P+ SL +++YF+LFI
Sbjct: 295 LELVHTNLCGPMSIPSLSQNKYFILFI 321
Score = 71.2 bits (173), Expect(7) = e-162
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = -3
Query: 2299 DDFSRKIWVYFLKEKSEAFDAFMKFKSLVEN*SGFSIKALCTDRGGEFTSKTFNNFCESN 2120
DD +R WVYFL K+ F+ F KF+++VE+ SG IK L +D G E+TS FN FCE
Sbjct: 322 DDLTRMTWVYFLTSKAHTFNVFKKFRAMVESQSGCKIKMLRSDNGKEYTSNEFNKFCEDE 381
Query: 2119 GI 2114
GI
Sbjct: 382 GI 383
Score = 59.7 bits (143), Expect(7) = e-162
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Frame = -3
Query: 3082 CLNCKKYRHYAT*CRHANRRTKNSFCTQVEKKEEESA-----FLLSCNKEKKEQEAWIMD 2918
C CK++ H CR +++ QV +E+S F+ S + W +D
Sbjct: 53 CNYCKRWGHREKFCRLKQNQSQPQHAHQVNFTDEQSQHEDHLFMASQECSSASKYVWYVD 112
Query: 2917 IAASNHMTGKKDLFVSLNESFKRSTSFGDGRKVDVTGIRNILIISNNGSHQFISQVYYVP 2738
HM + LF SL+ + + G+G V G I + ++ G +FI+ V +P
Sbjct: 113 SGCMIHMAKEPSLFTSLDRAVRTKVKLGNGEIVQTEGKGTISVHTSKGP-KFINDVLLIP 171
Query: 2737 ALKSNILSLGQL---------KDGSMTI*NSENKFLAKVKMSQN 2633
L N+LS+ QL K+ I +S + + KV+M N
Sbjct: 172 DLDQNLLSVAQLMKKGYSLSFKNNGCVIMDSNDSEVVKVEMCGN 215
Score = 35.8 bits (81), Expect(7) = e-162
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -1
Query: 2097 VPSSPQQNAVVERKNRTILDMT*SMLKSKNMLK*F*VEAI 1978
V +P++N V ERKNRT+++M ++ K + K F EAI
Sbjct: 389 VSYTPEKNGVSERKNRTVMEMARCLIAEKKLPKSFWAEAI 428