BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00032315
         (1171 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHA12982.1| hypothetical chloroplast RF19 (plastid) [Monocost...   739   0.0  
gb|AHA13068.1| hypothetical chloroplast RF19 (plastid) [Costus p...   720   0.0  
ref|YP_007475677.1| hypothetical chloroplast RF19 [Heliconia col...   634   0.0  
ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis...   599   0.0  
ref|YP_009180418.1| hypothetical chloroplast RF19 (chloroplast) ...   596   0.0  
ref|YP_009420633.1| hypothetical chloroplast RF19 (chloroplast) ...   585   0.0  
gb|AHA13240.1| hypothetical chloroplast RF19 (plastid) [Thaumato...   577   0.0  
gb|AHA12813.1| hypothetical chloroplast RF19 (plastid) [Canna in...   571   0.0  
gb|AQV11111.1| hypothetical chloroplast RF1 (chloroplast) [Tilla...   547   e-176
gb|AHH24272.1| hypothetical chloroplast protein ycf1, partial (c...   539   e-176
ref|YP_009440902.1| hypothetical chloroplast protein ycf1 (plast...   539   e-173
gb|AFM83351.1| hypothetical chloroplast RF19 (chloroplast) [King...   536   e-173
gb|AEX94015.1| hypothetical chloroplast RF19 (chloroplast) [Dory...   533   e-171
ref|YP_009415263.1| hypothetical chloroplast RF19 (chloroplast) ...   534   e-171
ref|YP_009116400.1| hypothetical chloroplast RF1 (chloroplast) [...   532   e-171
ref|YP_009248064.1| hypothetical chloroplast RF19 (plastid) [Nyp...   530   e-170
ref|YP_007475933.1| hypothetical chloroplast RF19 [Calamus caryo...   529   e-170
gb|AHA12896.1| hypothetical chloroplast RF19 (plastid) [Maranta ...   529   e-169
ref|YP_009247719.1| hypothetical chloroplast RF19 (plastid) [Sal...   528   e-169
ref|YP_009248322.1| hypothetical chloroplast RF19 (plastid) [Leu...   528   e-169

>gb|AHA12982.1| hypothetical chloroplast RF19 (plastid) [Monocostus uniflorus]
          Length = 1842

 Score =  739 bits (1909), Expect = 0.0
 Identities = 364/388 (93%), Positives = 367/388 (94%), Gaps = 2/388 (0%)
 Frame = -3

Query: 1169 FFL--QQEINLSNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIK 996
            FFL  QQEINLSNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYK KPWIIPIK
Sbjct: 1455 FFLTIQQEINLSNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKMKPWIIPIK 1514

Query: 995  LLFSNIYYYENEKNISQNKNIKDSIKIEFTNSNQEKKEKANLVSDLRKESQKKYPQEDYT 816
            LLFSNIYYYENEK ISQNKNIKDSIKIEF NSNQEKKE+ANLVSDLRKESQKKYPQEDY 
Sbjct: 1515 LLFSNIYYYENEKKISQNKNIKDSIKIEFPNSNQEKKEEANLVSDLRKESQKKYPQEDYM 1574

Query: 815  RPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYCLLLRLINPR 636
             PDI            KERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYCLLLRLINPR
Sbjct: 1575 SPDIKKGKKKKQSKKNKERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYCLLLRLINPR 1634

Query: 635  EIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGISLV 456
            EIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGISLV
Sbjct: 1635 EIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGISLV 1694

Query: 455  DKSKHQINRKYIKKRYVDKNNKSTGRHGNMFVNGYQDYYDFLVPENILSPKRRRELRILI 276
            DKSKHQINRKYIKKRYVDKNNKSTGRHGNMFVNGYQDYYDFLVPENILSPKRRRELRILI
Sbjct: 1695 DKSKHQINRKYIKKRYVDKNNKSTGRHGNMFVNGYQDYYDFLVPENILSPKRRRELRILI 1754

Query: 275  CFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIKCKFFLWPNYRLEDLAC 96
            CFNSHNWDVVNRNPVFCNENNIRNSAQFLN+DKRLNTDPNKFIKCKFFLWPNYRLEDLAC
Sbjct: 1755 CFNSHNWDVVNRNPVFCNENNIRNSAQFLNEDKRLNTDPNKFIKCKFFLWPNYRLEDLAC 1814

Query: 95   LNRYWFDTNNGSHFSMSRINMYPHFRII 12
            LNRYWFDTNNGS FSMSRI+MYP FRII
Sbjct: 1815 LNRYWFDTNNGSRFSMSRIHMYPRFRII 1842


>gb|AHA13068.1| hypothetical chloroplast RF19 (plastid) [Costus pulverulentus]
          Length = 1825

 Score =  720 bits (1859), Expect = 0.0
 Identities = 356/389 (91%), Positives = 366/389 (94%), Gaps = 4/389 (1%)
 Frame = -3

Query: 1169 FFL--QQEINLSNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIK 996
            FFL  QQEINLSNQKKKMDWIGMNRERVYCTTSNLEL FFPEFVLPFDAYK KPWIIPIK
Sbjct: 1437 FFLTIQQEINLSNQKKKMDWIGMNRERVYCTTSNLELLFFPEFVLPFDAYKMKPWIIPIK 1496

Query: 995  LLFSNIYYYENEKNISQNKNIKDSIKIEFTNSNQEKKEKANLV--SDLRKESQKKYPQED 822
            LLFSNIYYYENEKNISQNKNIKDSIKIEFTNSNQEKKE+ANLV  SDLRKESQKKYPQED
Sbjct: 1497 LLFSNIYYYENEKNISQNKNIKDSIKIEFTNSNQEKKEEANLVFVSDLRKESQKKYPQED 1556

Query: 821  YTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYCLLLRLIN 642
            YTRPDI            KERELDLFLKKYF+FQLRWD+PLNQKM NNIKVYCLLLRLIN
Sbjct: 1557 YTRPDIKKGKKKKQSKKNKERELDLFLKKYFIFQLRWDNPLNQKMTNNIKVYCLLLRLIN 1616

Query: 641  PREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGIS 462
            PREIAISSI+RREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGIS
Sbjct: 1617 PREIAISSIQRREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGIS 1676

Query: 461  LVDKSKHQINRKYIKKRYVDKNNKSTGRHGNMFVNGYQDYYDFLVPENILSPKRRRELRI 282
            LV+KSKHQINRKYIKK+YVDKNNKSTG HGNMFVNGYQDYYDFLVPENILSPKRRRELRI
Sbjct: 1677 LVNKSKHQINRKYIKKKYVDKNNKSTGPHGNMFVNGYQDYYDFLVPENILSPKRRRELRI 1736

Query: 281  LICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIKCKFFLWPNYRLEDL 102
            LICFNSHNW+VVNRNPVFCNENNI+NSAQFLN+DKRLNTDPNK IKCKFFLWPNYRLEDL
Sbjct: 1737 LICFNSHNWNVVNRNPVFCNENNIKNSAQFLNEDKRLNTDPNKLIKCKFFLWPNYRLEDL 1796

Query: 101  ACLNRYWFDTNNGSHFSMSRINMYPHFRI 15
            ACLNRYWFDTNNGS FSMSRI+MYP FRI
Sbjct: 1797 ACLNRYWFDTNNGSRFSMSRIHMYPRFRI 1825


>ref|YP_007475677.1| hypothetical chloroplast RF19 [Heliconia collinsiana]
 gb|AGE92742.1| hypothetical chloroplast RF19 (plastid) [Heliconia collinsiana]
          Length = 1782

 Score =  634 bits (1635), Expect = 0.0
 Identities = 315/387 (81%), Positives = 339/387 (87%), Gaps = 3/387 (0%)
 Frame = -3

Query: 1163 LQQEINLSNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLFS 984
            ++QEIN SNQK   DW+GMNR+RVYCT SNLE WFFPE VL FDAYK KPWIIPIKLL S
Sbjct: 1399 IRQEINPSNQKSFFDWMGMNRKRVYCTISNLEPWFFPELVLLFDAYKIKPWIIPIKLLLS 1458

Query: 983  NIYYYENEKNISQNKNIKDSIKIEFTNSNQEKKEK---ANLVSDLRKESQKKYPQEDYTR 813
            NIYYYE  KNISQNKNIKDSIKIEF NSNQ+K E+   +NLVSDLRK++QKKY ++DY R
Sbjct: 1459 NIYYYE--KNISQNKNIKDSIKIEFLNSNQQKNEEEGQSNLVSDLRKQNQKKYLEKDYAR 1516

Query: 812  PDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYCLLLRLINPRE 633
             DI            +ERELDLFLKKYFLFQLRWDDPLN+KM+ NI VYCLLLRLINPR+
Sbjct: 1517 SDIKKGKKKKQSKKNRERELDLFLKKYFLFQLRWDDPLNEKMMTNITVYCLLLRLINPRK 1576

Query: 632  IAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGISLVD 453
            IAISSI+R EMHLDVMLIQKDLALT+LIKKGI IIEP+RLSLRRDGKFIIYQTIGISLVD
Sbjct: 1577 IAISSIQRGEMHLDVMLIQKDLALTELIKKGILIIEPVRLSLRRDGKFIIYQTIGISLVD 1636

Query: 452  KSKHQINRKYIKKRYVDKNNKSTGRHGNMFVNGYQDYYDFLVPENILSPKRRRELRILIC 273
            KSK+QINRKYIKK YVDK N   GRHGNMFVNG QD+YDFLVPENILSP+RRRELRILIC
Sbjct: 1637 KSKYQINRKYIKKGYVDKKN-FNGRHGNMFVNGDQDHYDFLVPENILSPRRRRELRILIC 1695

Query: 272  FNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIKCKFFLWPNYRLEDLACL 93
            FNSHNWDVVNRN VFCNENNIRNS QFLN+DKRLNTD NKFIKCK FLWPNYRLEDLAC+
Sbjct: 1696 FNSHNWDVVNRNSVFCNENNIRNSVQFLNEDKRLNTDANKFIKCKLFLWPNYRLEDLACM 1755

Query: 92   NRYWFDTNNGSHFSMSRINMYPHFRII 12
            NRYWFDTNNGS FSMSRI+MYP FRII
Sbjct: 1756 NRYWFDTNNGSRFSMSRIHMYPRFRII 1782


>ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis]
 gb|AHA12572.1| hypothetical chloroplast RF19 (plastid) [Musa textilis]
          Length = 1901

 Score =  599 bits (1545), Expect = 0.0
 Identities = 296/379 (78%), Positives = 328/379 (86%), Gaps = 2/379 (0%)
 Frame = -3

Query: 1142 SNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLFSNIYYYEN 963
            ++QKK  DW+GMNR   Y T SNLE WFFPEFVLPFDAYK KPWIIPIKLL SNIYY   
Sbjct: 1528 THQKKFFDWMGMNRN--YSTISNLEPWFFPEFVLPFDAYKIKPWIIPIKLLLSNIYY--- 1582

Query: 962  EKNISQNKNIKDSIKIEFTNSNQEKKEKANLVSDLRKESQKKYPQEDYTRPDIXXXXXXX 783
            E +ISQN+NIKDS+KIEF NSNQEK+ ++NLVSD +K++QK+YP+ED TR +I       
Sbjct: 1583 ENDISQNQNIKDSVKIEFQNSNQEKEGQSNLVSDPQKQNQKEYPEEDCTRSNIKKGKKKK 1642

Query: 782  XXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYCLLLRLINPREIAISSIERRE 603
                 KE ELDLFLKK+F+FQLRWDDPLNQK+ NN+++YCLLLRLINPREI ISSI+R E
Sbjct: 1643 KSKKNKEGELDLFLKKFFIFQLRWDDPLNQKIFNNVRIYCLLLRLINPREITISSIQRGE 1702

Query: 602  MHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGISLVDKSKHQINRKY 423
            +HLDVMLIQKD ALT+LIK+GI IIEPIRLSLRRDGKFIIYQTI ISLVDKSKHQINRKY
Sbjct: 1703 IHLDVMLIQKDKALTELIKRGILIIEPIRLSLRRDGKFIIYQTISISLVDKSKHQINRKY 1762

Query: 422  IKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVPENILSPKRRRELRILICFNSHNWDV 249
            IKKRYVDK N  KSTGRHGN+FVNG QD+Y+F VPENILSP+RRRELRILICFNSHN D+
Sbjct: 1763 IKKRYVDKKNFKKSTGRHGNIFVNGDQDHYNFFVPENILSPRRRRELRILICFNSHNRDI 1822

Query: 248  VNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIKCKFFLWPNYRLEDLACLNRYWFDTN 69
            VNRNPVFCNENNIRNS QFLN+DKRLNTD NK IKCK FLWPNYRLEDLAC+NRYWFDTN
Sbjct: 1823 VNRNPVFCNENNIRNSEQFLNEDKRLNTDLNKLIKCKLFLWPNYRLEDLACMNRYWFDTN 1882

Query: 68   NGSHFSMSRINMYPHFRII 12
            NGS FSMSRI MYP FRII
Sbjct: 1883 NGSRFSMSRIRMYPRFRII 1901


>ref|YP_009180418.1| hypothetical chloroplast RF19 (chloroplast) [Musa balbisiana]
 ref|YP_009180432.1| hypothetical chloroplast RF19 (chloroplast) [Musa balbisiana]
 gb|ALL97086.1| hypothetical chloroplast RF19 (chloroplast) [Musa balbisiana]
 gb|ALL97099.1| hypothetical chloroplast RF19 (chloroplast) [Musa balbisiana]
          Length = 1912

 Score =  596 bits (1536), Expect = 0.0
 Identities = 298/403 (73%), Positives = 331/403 (82%), Gaps = 26/403 (6%)
 Frame = -3

Query: 1142 SNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLFSNIYYY-- 969
            ++QKK  DW+GMNR   Y T SNLE WFFPEFVLPFDAYK KPWIIPIKLL SNIYY   
Sbjct: 1512 THQKKFFDWMGMNRN--YSTISNLEPWFFPEFVLPFDAYKIKPWIIPIKLLLSNIYYEND 1569

Query: 968  ----------------------ENEKNISQNKNIKDSIKIEFTNSNQEKKEKANLVSDLR 855
                                  +N+KNISQN+NIKDS+KIEF NSNQEK+ ++NLVSD +
Sbjct: 1570 ISQNQNEKNISQNQNEKNISQNQNKKNISQNQNIKDSVKIEFQNSNQEKEGQSNLVSDPQ 1629

Query: 854  KESQKKYPQEDYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNI 675
            K++QK+YP+ED TR +I            KE ELDLFLKK+F+FQLRWDDPLNQK+ NN+
Sbjct: 1630 KQNQKEYPEEDCTRSNIKKGKKKKKSKKNKEGELDLFLKKFFIFQLRWDDPLNQKIFNNV 1689

Query: 674  KVYCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDG 495
            ++YCLLLRLINPREI ISSI+R E+HLDVMLIQKD ALT+LIK+GI IIEPIRLSLRRDG
Sbjct: 1690 RIYCLLLRLINPREITISSIQRGEIHLDVMLIQKDKALTELIKRGILIIEPIRLSLRRDG 1749

Query: 494  KFIIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVPE 321
            KFIIYQTI ISLVDKSKHQINRKYIKKRYVDK N  KSTGRHGN+FVNG QD+Y+F VPE
Sbjct: 1750 KFIIYQTISISLVDKSKHQINRKYIKKRYVDKKNFKKSTGRHGNIFVNGDQDHYNFFVPE 1809

Query: 320  NILSPKRRRELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIKC 141
            NILSP+RRRELRILICFNSHN D+VNRNPVFCNENNIRNS QFLN+DKRLNTD NK IKC
Sbjct: 1810 NILSPRRRRELRILICFNSHNRDIVNRNPVFCNENNIRNSEQFLNEDKRLNTDLNKLIKC 1869

Query: 140  KFFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRII 12
            K FLWPNYRLEDLAC+NRYWFDTNNGS FSMSRI MYP FRII
Sbjct: 1870 KLFLWPNYRLEDLACMNRYWFDTNNGSRFSMSRIRMYPRFRII 1912


>ref|YP_009420633.1| hypothetical chloroplast RF19 (chloroplast) [Musa itinerans]
 gb|ASO76321.1| hypothetical chloroplast RF19 (chloroplast) [Musa itinerans]
          Length = 1911

 Score =  585 bits (1509), Expect = 0.0
 Identities = 296/404 (73%), Positives = 330/404 (81%), Gaps = 27/404 (6%)
 Frame = -3

Query: 1142 SNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLFSNIYYY-- 969
            ++QKK  DW+GMNR   Y T SNLE WFFPEFVLPFDAYK KPWIIPIKLL SNIYY   
Sbjct: 1510 THQKKFFDWMGMNRN--YSTISNLEPWFFPEFVLPFDAYKIKPWIIPIKLLLSNIYYEND 1567

Query: 968  ----------------------ENEKNISQNKNIKDSIKIEFTNSNQEKKEKANLVSDLR 855
                                  +NEKNISQN+NI+DS+KIEF NSNQEK+ ++NLVSD +
Sbjct: 1568 ISQNQNEKNISQNQNEKNISQNQNEKNISQNQNIEDSVKIEFQNSNQEKEGQSNLVSDPQ 1627

Query: 854  KESQKKYPQEDYTRPDIXXXXXXXXXXXXK-ERELDLFLKKYFLFQLRWDDPLNQKMINN 678
            K++QK+Y +ED TR +I            K E ELDLFLKKYF+FQLRWDDP NQK++NN
Sbjct: 1628 KQNQKEYLEEDCTRSNIKKGKKKKKQSKKKKEGELDLFLKKYFIFQLRWDDPWNQKIMNN 1687

Query: 677  IKVYCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRD 498
            +++YC LLRLINP+EIAISSI+R E+HLDVM I+KDLALT+LIKKGI IIEPIRLSLRRD
Sbjct: 1688 VRIYCFLLRLINPKEIAISSIQRGEIHLDVMSIRKDLALTELIKKGILIIEPIRLSLRRD 1747

Query: 497  GKFIIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVP 324
            GKFIIYQTI ISLVDKSKHQINRKYIKKRYVDK N  KSTGRHGN+FVNG QD+Y+F VP
Sbjct: 1748 GKFIIYQTISISLVDKSKHQINRKYIKKRYVDKKNFKKSTGRHGNIFVNGDQDHYNFFVP 1807

Query: 323  ENILSPKRRRELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIK 144
            ENILSP+RRRELRILICFNSHN D+VNRNPVFCNENNIRNS QFLN+DKRLNTD NK IK
Sbjct: 1808 ENILSPRRRRELRILICFNSHNRDIVNRNPVFCNENNIRNSEQFLNEDKRLNTDLNKLIK 1867

Query: 143  CKFFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRII 12
            CK FLWPNYRLEDLAC+NRYWFDTNNGS FSMSRI MYP FRII
Sbjct: 1868 CKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMSRIRMYPRFRII 1911


>gb|AHA13240.1| hypothetical chloroplast RF19 (plastid) [Thaumatococcus daniellii]
          Length = 1874

 Score =  577 bits (1488), Expect = 0.0
 Identities = 297/397 (74%), Positives = 332/397 (83%), Gaps = 13/397 (3%)
 Frame = -3

Query: 1163 LQQEINLSNQKKK----MDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIK 996
            + QE+N S  KKK     DW+GMNR   +CT SNLE WFFPEFV  FD YK KPWIIPIK
Sbjct: 1482 IYQEMNPSKNKKKKKHFFDWMGMNRN--FCTISNLESWFFPEFV--FDVYKIKPWIIPIK 1537

Query: 995  LLFSNIYYYENEKNISQNKNIKDSIKIEFTNSNQEKKEK---ANLVSDLRKESQKKYPQE 825
            LL SNIYY ENEKNI+QNKNIKDS+K++F NSNQEK E+   +NL+S+LRK++QKK+ +E
Sbjct: 1538 LLLSNIYYNENEKNINQNKNIKDSLKMKFQNSNQEKNEEKGQSNLLSNLRKQNQKKHLEE 1597

Query: 824  DYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYCLLLRLI 645
            + T+ DI            KERELDLFLKKYF FQ++WDD LNQK+INNIKVYCLLLRLI
Sbjct: 1598 NCTKSDIKKGKKKKKSKKNKERELDLFLKKYFRFQIKWDDFLNQKIINNIKVYCLLLRLI 1657

Query: 644  NPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGI 465
            NP+EI+ISSI+RREM+LD+M+ QKDLAL +LIKKGI IIEP RLSLRRDGK IIYQTIGI
Sbjct: 1658 NPKEISISSIQRREMYLDIMMSQKDLALRELIKKGILIIEPSRLSLRRDGKLIIYQTIGI 1717

Query: 464  SLVDKSKHQINRKYIKKRYVDKN--NKSTGRHGNMFVNGYQDYYDFLVPENILSPKRRRE 291
             LVDKSKH IN+KYIKKRYVDK   NKSTGRHGNMFVNG QD+YDFLVPENILSP+RRRE
Sbjct: 1718 LLVDKSKHPINKKYIKKRYVDKKNFNKSTGRHGNMFVNGDQDHYDFLVPENILSPRRRRE 1777

Query: 290  LRILICFNS--HNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFI--KCKFFLWP 123
            LRI+ICFNS  HN DVVN NPVF NENNI NSAQFLN+DK LNTDPNKFI  KCK FLWP
Sbjct: 1778 LRIIICFNSETHNLDVVNGNPVFLNENNIINSAQFLNEDKCLNTDPNKFIKCKCKLFLWP 1837

Query: 122  NYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRII 12
            NYRLEDLAC+NRYWFDTNNGS FSMSRI+MYP FRII
Sbjct: 1838 NYRLEDLACMNRYWFDTNNGSRFSMSRIHMYPRFRII 1874


>gb|AHA12813.1| hypothetical chloroplast RF19 (plastid) [Canna indica]
          Length = 1803

 Score =  571 bits (1471), Expect = 0.0
 Identities = 299/402 (74%), Positives = 332/402 (82%), Gaps = 16/402 (3%)
 Frame = -3

Query: 1169 FFL--QQEINLSNQKKK---MDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWII 1005
            FFL   Q+I  SNQKK     DW+GMNR+   CT SNLE WFFPEFVLPFD YK KPWII
Sbjct: 1406 FFLTIHQKIIPSNQKKNTHFFDWMGMNRDS--CTISNLEPWFFPEFVLPFDTYKIKPWII 1463

Query: 1004 PIKLLFSNIYYYE----NEKNISQNKNIKDSIKI--EFTNSNQEKKEK---ANLVSDLRK 852
            PIKLL SNI Y E    NEKNIS+NKNIKDSIKI  E  NSNQEKK+K   +NLVS+L+K
Sbjct: 1464 PIKLLLSNICYNESYNENEKNISENKNIKDSIKIKMELKNSNQEKKKKEGQSNLVSNLQK 1523

Query: 851  ESQKKYPQEDYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNIK 672
              QKK  +E+Y + DI            KE ELDLFLKKYFLFQLRW++ LNQK+INNIK
Sbjct: 1524 --QKKDLEENYAKSDIKKSQKKKESKKKKESELDLFLKKYFLFQLRWNESLNQKIINNIK 1581

Query: 671  VYCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGK 492
            VYCLLLRLINPR+I +SSI+R+EM+LDVM+ QK+L LT+L+K GI IIEPIRLSLRRDGK
Sbjct: 1582 VYCLLLRLINPRKIILSSIQRKEMYLDVMMSQKNLTLTKLLKNGILIIEPIRLSLRRDGK 1641

Query: 491  FIIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVPEN 318
            FIIYQTIGISLVDK+KHQINRKYIKKRYV+K N  KSTGRH NMFVN  QD+Y+FLVPEN
Sbjct: 1642 FIIYQTIGISLVDKNKHQINRKYIKKRYVNKKNFNKSTGRHDNMFVNRDQDHYNFLVPEN 1701

Query: 317  ILSPKRRRELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIKCK 138
            ILSP+RRRELRILICFNS NWDVVN+N VFCNENNIRNSAQF+NKDK LNTD NK IKCK
Sbjct: 1702 ILSPRRRRELRILICFNSQNWDVVNKNSVFCNENNIRNSAQFMNKDKGLNTDTNKLIKCK 1761

Query: 137  FFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRII 12
            FFLWPNYRLEDLAC+NRYWFDTNNGS FSMSRI++YP F II
Sbjct: 1762 FFLWPNYRLEDLACMNRYWFDTNNGSRFSMSRIHIYPQFIII 1803


>gb|AQV11111.1| hypothetical chloroplast RF1 (chloroplast) [Tillandsia usneoides]
          Length = 1866

 Score =  547 bits (1410), Expect = e-176
 Identities = 286/408 (70%), Positives = 324/408 (79%), Gaps = 24/408 (5%)
 Frame = -3

Query: 1163 LQQEINLSNQKKK-MDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLF 987
            + QEIN SNQK   ++W+GMN+ERVY T SNLE WFFPEFVL FDAYK KPWIIPIKLL 
Sbjct: 1464 IHQEINPSNQKSIFLNWMGMNQERVYHTISNLESWFFPEFVLLFDAYKIKPWIIPIKLLL 1523

Query: 986  SNIYYYENEKNISQNKNI--------------KDSIKIEFTNSNQEKKEK---ANLVSDL 858
             + Y+Y+N+   SQNKNI              K ++K+E  NSNQ+K E+    NLVSDL
Sbjct: 1524 FDFYFYKNK---SQNKNININGKNNLQMISHQKKNLKLE--NSNQQKNEQQDQVNLVSDL 1578

Query: 857  RKESQKKYPQEDYTRPDIXXXXXXXXXXXXK--ERELDLFLKKYFLFQLRWDDPLNQKMI 684
            RKE++KK  +E+Y R DI            K  E ELD FLKKYFLFQLRWDD LNQ+MI
Sbjct: 1579 RKENKKKDIEENYARSDITIKKGKKKKQSKKNKEAELDFFLKKYFLFQLRWDDSLNQRMI 1638

Query: 683  NNIKVYCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLR 504
            NNIKVYCLLLRLINP+EIAISSI+R EMHLDVMLIQKDLALT+LIKKGI IIEPI LS++
Sbjct: 1639 NNIKVYCLLLRLINPKEIAISSIQRGEMHLDVMLIQKDLALTELIKKGILIIEPIHLSIK 1698

Query: 503  RDGKFIIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFL 330
            RDGKFIIYQTI ISLV+ +KHQ NRK IKKRY+DK N  K   R+GNM VNG  +YYDFL
Sbjct: 1699 RDGKFIIYQTISISLVENNKHQTNRKCIKKRYIDKRNLDKPIVRYGNMLVNGDTNYYDFL 1758

Query: 329  VPENILSPKRRRELRILICFNSHNWDVV--NRNPVFCNENNIRNSAQFLNKDKRLNTDPN 156
            VPENILSP+RRRELR+LICFNSHNW+V   NRNP+FCNENNIRNS +FL++DK LNTD N
Sbjct: 1759 VPENILSPRRRRELRMLICFNSHNWNVTDRNRNPLFCNENNIRNSVKFLDEDKHLNTDTN 1818

Query: 155  KFIKCKFFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRII 12
            KFIKCKF LWPNYRLEDLAC+NRYWFDTNNGS FSMSRI+MYP FRII
Sbjct: 1819 KFIKCKFVLWPNYRLEDLACMNRYWFDTNNGSRFSMSRIHMYPRFRII 1866


>gb|AHH24272.1| hypothetical chloroplast protein ycf1, partial (chloroplast)
            [Japonolirion osense]
          Length = 1537

 Score =  539 bits (1388), Expect = e-176
 Identities = 275/404 (68%), Positives = 313/404 (77%), Gaps = 27/404 (6%)
 Frame = -3

Query: 1145 LSNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLFSNIYYYE 966
            + ++KK  DW+GMN+ER+YCT  NL+ WFFPEFVL FDAYK KPWIIPIKLL  N+++YE
Sbjct: 1136 IQSKKKLFDWMGMNQERLYCTILNLDPWFFPEFVLLFDAYKIKPWIIPIKLLLLNLHFYE 1195

Query: 965  NEKNISQNKNIKDSIK------------IEFTNSNQEKKEK-------------ANLVSD 861
            N    SQNKNI  + K            +E  NSNQEK E+              N  SD
Sbjct: 1196 NR---SQNKNININQKKDIYISSNQKEYLELENSNQEKNEQQGQGDLVSDKQNQGNRGSD 1252

Query: 860  LRKESQKKYPQEDYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMIN 681
            LRK+++KK  +EDY  PDI            KE ELD FL+KYFLFQLRWDDPLNQ+MIN
Sbjct: 1253 LRKQNKKKDVEEDYAGPDIKKRRKKKQSKSNKEAELDFFLRKYFLFQLRWDDPLNQRMIN 1312

Query: 680  NIKVYCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRR 501
            NIKVYCLLLRLINPREIAISSI+R EM LDVMLI KDLALT+LIKKGI IIEP+RLS+++
Sbjct: 1313 NIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIHKDLALTELIKKGILIIEPVRLSIKK 1372

Query: 500  DGKFIIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLV 327
            DG+FIIYQTIGISLVDKSKHQ NRKYIKKRYVD+ N  +S  RH +M VNG ++YYDFLV
Sbjct: 1373 DGQFIIYQTIGISLVDKSKHQTNRKYIKKRYVDEKNFDRSIPRHSSMLVNGDKNYYDFLV 1432

Query: 326  PENILSPKRRRELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFI 147
            PENILSP+RRRELRILI FNS NW+VV++NPVF NENNIRN  QF N+DK LNTD NKFI
Sbjct: 1433 PENILSPRRRRELRILISFNSWNWNVVDKNPVFFNENNIRNCGQFWNEDKHLNTDANKFI 1492

Query: 146  KCKFFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRI 15
            K K FLWPNYRLEDLAC+NRYWFDTNNGS FSMSRI+MYP FRI
Sbjct: 1493 KFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMSRIHMYPRFRI 1536


>ref|YP_009440902.1| hypothetical chloroplast protein ycf1 (plastid) [Japonolirion osense]
 emb|CUS18857.1| hypothetical chloroplast protein ycf1 (plastid) [Japonolirion osense]
          Length = 1877

 Score =  539 bits (1388), Expect = e-173
 Identities = 275/404 (68%), Positives = 313/404 (77%), Gaps = 27/404 (6%)
 Frame = -3

Query: 1145 LSNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLFSNIYYYE 966
            + ++KK  DW+GMN+ER+YCT  NL+ WFFPEFVL FDAYK KPWIIPIKLL  N+++YE
Sbjct: 1476 IQSKKKLFDWMGMNQERLYCTILNLDPWFFPEFVLLFDAYKIKPWIIPIKLLLLNLHFYE 1535

Query: 965  NEKNISQNKNIKDSIK------------IEFTNSNQEKKEK-------------ANLVSD 861
            N    SQNKNI  + K            +E  NSNQEK E+              N  SD
Sbjct: 1536 NR---SQNKNININQKKDIYISSNQKEYLELENSNQEKNEQQGQGDLVSDKQNQGNRGSD 1592

Query: 860  LRKESQKKYPQEDYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMIN 681
            LRK+++KK  +EDY  PDI            KE ELD FL+KYFLFQLRWDDPLNQ+MIN
Sbjct: 1593 LRKQNKKKDVEEDYAGPDIKKRRKKKQSKSNKEAELDFFLRKYFLFQLRWDDPLNQRMIN 1652

Query: 680  NIKVYCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRR 501
            NIKVYCLLLRLINPREIAISSI+R EM LDVMLI KDLALT+LIKKGI IIEP+RLS+++
Sbjct: 1653 NIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIHKDLALTELIKKGILIIEPVRLSIKK 1712

Query: 500  DGKFIIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLV 327
            DG+FIIYQTIGISLVDKSKHQ NRKYIKKRYVD+ N  +S  RH +M VNG ++YYDFLV
Sbjct: 1713 DGQFIIYQTIGISLVDKSKHQTNRKYIKKRYVDEKNFDRSIPRHSSMLVNGDKNYYDFLV 1772

Query: 326  PENILSPKRRRELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFI 147
            PENILSP+RRRELRILI FNS NW+VV++NPVF NENNIRN  QF N+DK LNTD NKFI
Sbjct: 1773 PENILSPRRRRELRILISFNSWNWNVVDKNPVFFNENNIRNCGQFWNEDKHLNTDANKFI 1832

Query: 146  KCKFFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRI 15
            K K FLWPNYRLEDLAC+NRYWFDTNNGS FSMSRI+MYP FRI
Sbjct: 1833 KFKLFLWPNYRLEDLACMNRYWFDTNNGSRFSMSRIHMYPRFRI 1876


>gb|AFM83351.1| hypothetical chloroplast RF19 (chloroplast) [Kingia australis]
          Length = 1849

 Score =  536 bits (1382), Expect = e-173
 Identities = 276/398 (69%), Positives = 311/398 (78%), Gaps = 15/398 (3%)
 Frame = -3

Query: 1163 LQQEINLSNQKKKM-DWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLF 987
            + QEIN SNQK+   DW+GMN+ER+YCT SNLE WFFPEFVL FDAYK K WI+PIKLL 
Sbjct: 1450 IPQEINPSNQKRYFFDWMGMNQERIYCTISNLETWFFPEFVLLFDAYKIKTWIMPIKLLL 1509

Query: 986  SNIYYYENEK-----NISQNKNIKDSIK----IEFTNSNQEKKEK---ANLVSDLRKESQ 843
             N+  YEN       NI+Q KN K S      ++  NSNQEK E+    N+ SDLRK+++
Sbjct: 1510 CNLSLYENSSQNKNININQKKNFKISSNQKEYLKLENSNQEKNEQQVEGNIGSDLRKQNK 1569

Query: 842  KKYPQEDYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYC 663
            KK  +EDY +  I            KE ELD FLKKYFLFQLRWDD LNQ+M++NIKVYC
Sbjct: 1570 KKDLEEDYAKSGIKKGKKKKQFKNNKEAELDFFLKKYFLFQLRWDDSLNQRMLDNIKVYC 1629

Query: 662  LLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFII 483
             LLRLINPREIAISSI+R EMHLDVMLIQKDLALT+LIKKGI IIEPI LS++RDGKF I
Sbjct: 1630 FLLRLINPREIAISSIQRGEMHLDVMLIQKDLALTELIKKGILIIEPIHLSIKRDGKFDI 1689

Query: 482  YQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVPENILS 309
            YQTIGISLV+KSKHQ NRK IKK +VDKNN  K   RH NM VNG +++YDF VPENILS
Sbjct: 1690 YQTIGISLVNKSKHQTNRKCIKKSHVDKNNFDKLIVRHRNMVVNGDKNHYDFFVPENILS 1749

Query: 308  PKRRRELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIKCKFFL 129
            P RRRELRILICFNS NWDVV+RNP FCNE+NI NS Q L + K LNTD NKFIKCKFFL
Sbjct: 1750 PLRRRELRILICFNSRNWDVVDRNPAFCNESNIINSGQSLTEAKHLNTDANKFIKCKFFL 1809

Query: 128  WPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRI 15
            WPNYRLEDLAC+NRYWFDTNNGS FSMSRI+MYP FR+
Sbjct: 1810 WPNYRLEDLACMNRYWFDTNNGSRFSMSRIHMYPRFRM 1847


>gb|AEX94015.1| hypothetical chloroplast RF19 (chloroplast) [Doryanthes palmeri]
          Length = 1858

 Score =  533 bits (1373), Expect = e-171
 Identities = 273/403 (67%), Positives = 317/403 (78%), Gaps = 18/403 (4%)
 Frame = -3

Query: 1169 FFLQQEINLSNQKKKM-DWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKL 993
            F +  EIN SNQKK   DW+GMN+ER+Y T SNLE WFFPEFVL FDAYK KPWIIPIKL
Sbjct: 1458 FTIHHEINPSNQKKHFFDWMGMNQERLYRTISNLEPWFFPEFVLLFDAYKIKPWIIPIKL 1517

Query: 992  LFSNIYYYENEKNISQNKNIKDSIK------------IEFTNSNQEKKEK---ANLVSDL 858
            L   I+++   +NISQ++ I  + K            +E  NSN++K E+    +LVSDL
Sbjct: 1518 L---IFHFHRNENISQSQKINVNKKRNLPISSNQKEYLELENSNKKKNEQQDQGDLVSDL 1574

Query: 857  RKESQKKYPQEDYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINN 678
            RK+ +KK  +EDY   DI            KE ELD FLKKYFLFQL+WDDPLNQ+MINN
Sbjct: 1575 RKKKKKKDVEEDYAGSDIKKGRKKKQSKSKKEAELDFFLKKYFLFQLKWDDPLNQRMINN 1634

Query: 677  IKVYCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRD 498
            IKVYCLLLRLI+PREIAISSI+R E+HLDVMLIQKDL LT+LIKKGI IIEPIRLS++RD
Sbjct: 1635 IKVYCLLLRLIDPREIAISSIQRGEIHLDVMLIQKDLTLTELIKKGILIIEPIRLSIKRD 1694

Query: 497  GKFIIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVP 324
            GKFIIYQTIGISLVDKSK Q +RK++KKRYVDK N   S  RH NM VN  +++YDFLVP
Sbjct: 1695 GKFIIYQTIGISLVDKSKRQTHRKFLKKRYVDKKNFDGSIVRHSNMLVNRNKNHYDFLVP 1754

Query: 323  ENILSPKRRRELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIK 144
            ENILSP+RRRELRILICFNS +W+VV+RNP+FCN+NNIRN  QFLN+D+ LNTD NK +K
Sbjct: 1755 ENILSPRRRRELRILICFNSRSWNVVDRNPIFCNQNNIRNCGQFLNEDQHLNTDANKLMK 1814

Query: 143  CKFFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRI 15
             K FLWPNY LEDLAC+NRYWFDTNNGSHFSMSRI+MYP FRI
Sbjct: 1815 FKLFLWPNYCLEDLACMNRYWFDTNNGSHFSMSRIHMYPRFRI 1857


>ref|YP_009415263.1| hypothetical chloroplast RF19 (chloroplast) [Musella lasiocarpa]
 ref|YP_009415277.1| hypothetical chloroplast RF19 (chloroplast) [Musella lasiocarpa]
 gb|ASL69910.1| hypothetical chloroplast RF19 (chloroplast) [Musella lasiocarpa]
 gb|ASL69924.1| hypothetical chloroplast RF19 (chloroplast) [Musella lasiocarpa]
          Length = 1942

 Score =  534 bits (1376), Expect = e-171
 Identities = 264/327 (80%), Positives = 290/327 (88%), Gaps = 3/327 (0%)
 Frame = -3

Query: 983  NIYYYENEKNISQNKNIKDSIKIEFTNSNQEKKEKANLVSDLRKESQKKYPQEDYTRPDI 804
            NI   +NEKNISQNKNIKDSIKIEF NSNQEK+ ++NLVSD +K++QK+Y +EDYTR +I
Sbjct: 1616 NISQNKNEKNISQNKNIKDSIKIEFQNSNQEKEGQSNLVSDPQKQNQKEYLEEDYTRSNI 1675

Query: 803  XXXXXXXXXXXXK-ERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYCLLLRLINPREIA 627
                          ERELDLFLKKYF+FQLRWDDPLN+K+INN+++YCLLLRLINPREIA
Sbjct: 1676 KKGKKKKKQSKKNKERELDLFLKKYFIFQLRWDDPLNEKIINNVRIYCLLLRLINPREIA 1735

Query: 626  ISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGISLVDKS 447
            ISSI+R E+HLDVM IQKDLALT+LIKKGI IIEPIRLSLRRDGKFIIYQTI ISLVDKS
Sbjct: 1736 ISSIQRGEIHLDVMPIQKDLALTELIKKGILIIEPIRLSLRRDGKFIIYQTISISLVDKS 1795

Query: 446  KHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVPENILSPKRRRELRILIC 273
            KHQINRKYIKKRYVDK N  KSTGRHGN+FVNG QD+Y+FLVPENILSP+RRRELRILIC
Sbjct: 1796 KHQINRKYIKKRYVDKKNLKKSTGRHGNIFVNGDQDHYNFLVPENILSPRRRRELRILIC 1855

Query: 272  FNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIKCKFFLWPNYRLEDLACL 93
            FNSHNWD+VNRNPVFCNENNIRNS QFLN+DKRLNTD NK IKCK FLWPNYRLEDLAC+
Sbjct: 1856 FNSHNWDIVNRNPVFCNENNIRNSEQFLNEDKRLNTDLNKLIKCKLFLWPNYRLEDLACM 1915

Query: 92   NRYWFDTNNGSHFSMSRINMYPHFRII 12
            NRYWFDTNNGS FSMSRI MYP FRII
Sbjct: 1916 NRYWFDTNNGSRFSMSRIRMYPRFRII 1942



 Score =  105 bits (262), Expect = 1e-20
 Identities = 55/93 (59%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
 Frame = -3

Query: 1142 SNQKKKMDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLFSNIYYYEN 963
            ++QK   DW+GMNR     T SNLE WFFPEFVLPFDAYK KPWIIPIKLL SNIYY  N
Sbjct: 1482 THQKHFFDWMGMNRNS--STISNLEPWFFPEFVLPFDAYKIKPWIIPIKLLLSNIYYENN 1539

Query: 962  --EKNISQNKNIKDSIKIEFTNSNQEKKEKANL 870
              E NISQNKN K+  + +   +  + K K N+
Sbjct: 1540 ISENNISQNKNEKNISQNKNEKNISQNKNKKNI 1572


>ref|YP_009116400.1| hypothetical chloroplast RF1 (chloroplast) [Ananas comosus]
 dbj|BAQ19700.1| hypothetical chloroplast RF1 (chloroplast) [Ananas comosus]
 gb|AKU47195.1| hypothetical chloroplast RF19 (chloroplast) [Ananas comosus]
 gb|AMX23287.1| ycf1 (plastid) [Ananas comosus]
 gb|ANE11198.1| hypothetical chloroplast RF1 (plastid) [Ananas comosus]
          Length = 1866

 Score =  532 bits (1370), Expect = e-171
 Identities = 276/405 (68%), Positives = 320/405 (79%), Gaps = 21/405 (5%)
 Frame = -3

Query: 1163 LQQEINLSNQKKKM-DWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLF 987
            + QEIN SNQK    DW+GMN+ERVY T SNLE WFFPEFVL FDAYK KPWIIPI+LL+
Sbjct: 1464 IHQEINPSNQKSIFFDWMGMNQERVYRTISNLESWFFPEFVLLFDAYKIKPWIIPIQLLY 1523

Query: 986  SNIYYYENEK-----NISQNKNI------KDSIKIEFTNSNQEKKEK---ANLVSDLRKE 849
             ++Y+Y+N       NI++NKN+      K  +K+E  NSNQ+K E+    N VSD+RKE
Sbjct: 1524 FDLYFYKNTSQNKNININRNKNLQMISDQKKYLKLE--NSNQQKNEQQDQVNFVSDIRKE 1581

Query: 848  SQKKYPQEDYTRPDIXXXXXXXXXXXXK--ERELDLFLKKYFLFQLRWDDPLNQKMINNI 675
            ++KK  +E+Y R DI            K  E ELD FLKKYFLFQLRWDD LNQ+MINNI
Sbjct: 1582 NKKKDIEENYARSDITIKKGKKKKQSKKNKEAELDFFLKKYFLFQLRWDDSLNQRMINNI 1641

Query: 674  KVYCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDG 495
            KVYCLLLRLINP+EIAIS+I+R EMHLDVMLIQKDLALT+LIKKGI IIEPIRLS+++DG
Sbjct: 1642 KVYCLLLRLINPKEIAISAIQRGEMHLDVMLIQKDLALTELIKKGILIIEPIRLSIKKDG 1701

Query: 494  KFIIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVPE 321
            K IIYQTI ISLV+ +KHQ NRK IKKR +DK N  K   R+GNM VNG  +YYDFLVPE
Sbjct: 1702 KLIIYQTISISLVENNKHQTNRKCIKKRNIDKRNSDKPIVRYGNMLVNGDTNYYDFLVPE 1761

Query: 320  NILSPKRRRELRILICFNSHNWDVV--NRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFI 147
            NI+SP+RRRELR+LICFNSHNW+V   NRNP+FCNENNI NS +FL++DK LNTD NKFI
Sbjct: 1762 NIISPRRRRELRMLICFNSHNWNVTDRNRNPLFCNENNIGNSGKFLDEDKHLNTDTNKFI 1821

Query: 146  KCKFFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRII 12
            K KF LWPNYRLEDL C+NRYWFDTNNGS FSMSRI+MYP FRII
Sbjct: 1822 KYKFVLWPNYRLEDLTCMNRYWFDTNNGSRFSMSRIHMYPRFRII 1866


>ref|YP_009248064.1| hypothetical chloroplast RF19 (plastid) [Nypa fruticans]
 gb|AMW66030.1| hypothetical chloroplast RF19 (plastid) [Nypa fruticans]
          Length = 1846

 Score =  530 bits (1365), Expect = e-170
 Identities = 274/396 (69%), Positives = 311/396 (78%), Gaps = 13/396 (3%)
 Frame = -3

Query: 1163 LQQEINLSNQKKKM-DWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLF 987
            + Q I  SNQKK   DW+GMN+E+V+ T SNLE WFFPEFV  FDAYK KPWIIPIKLL 
Sbjct: 1452 IHQGIKPSNQKKHFFDWMGMNQEKVFRTISNLESWFFPEFVPLFDAYKIKPWIIPIKLLL 1511

Query: 986  SNIYYYEN-----EKNISQNKNIKDSIKIEFTNSNQEKKEKA---NLVSDLRKESQKKYP 831
             N Y+YEN     +KN     N K+ +K+E  NSNQEK E+    NL SDLRK+++KK  
Sbjct: 1512 FNFYFYENRSQNKKKNFQIPSNQKEYLKLE--NSNQEKNEQQGQENLGSDLRKQNKKKNV 1569

Query: 830  QEDYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYCLLLR 651
            +++Y R DI            KE ELD FLKKYFLFQLRWD+ LNQ++INNIKVYCLLLR
Sbjct: 1570 EDNYARSDIKKGKKKKQSKKKKEAELDFFLKKYFLFQLRWDNSLNQRIINNIKVYCLLLR 1629

Query: 650  LINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTI 471
            LINPR+IAISSI+R EMHL VMLIQKDL LT+LIKKGI IIEPIRLS+++DGKFIIYQT+
Sbjct: 1630 LINPRKIAISSIQRGEMHLYVMLIQKDLVLTELIKKGILIIEPIRLSIKKDGKFIIYQTL 1689

Query: 470  GISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVPENILSPKRR 297
            GISL+DK KHQ NRK IKKRYVDK N  KS  RHGNM V+G +  YDF VPENILSP+RR
Sbjct: 1690 GISLIDKIKHQNNRKCIKKRYVDKKNFDKSVARHGNMLVDGDKSNYDFFVPENILSPRRR 1749

Query: 296  RELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRL--NTDPNKFIKCKFFLWP 123
            RELRILICFNS NW+ V+RN VFCNENNIRNS +FLN+DK    NTD NKFIKCK FLWP
Sbjct: 1750 RELRILICFNSRNWNFVDRNLVFCNENNIRNSGKFLNEDKHFNTNTDTNKFIKCKLFLWP 1809

Query: 122  NYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRI 15
            NYRLEDLAC+NRYWF+TNNGS FSMSRI MYP FRI
Sbjct: 1810 NYRLEDLACMNRYWFNTNNGSRFSMSRIYMYPRFRI 1845


>ref|YP_007475933.1| hypothetical chloroplast RF19 [Calamus caryotoides]
 gb|AGE92998.1| hypothetical chloroplast RF19 (plastid) [Calamus caryotoides]
          Length = 1879

 Score =  529 bits (1363), Expect = e-170
 Identities = 276/406 (67%), Positives = 316/406 (77%), Gaps = 22/406 (5%)
 Frame = -3

Query: 1163 LQQEINLSNQKKKM-DWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLF 987
            + Q I  SNQKK   DW+GMN+E+VY T SNLE WFFPEFV  FDAYK KPWIIPIKLL 
Sbjct: 1468 IHQGIKPSNQKKHFFDWMGMNQEKVYRTISNLEPWFFPEFVPLFDAYKIKPWIIPIKLLL 1527

Query: 986  SNIYYYENEKNISQNKNIK------DSIKIEFT--------NSNQEKKEKA---NLVSDL 858
             + Y+Y  E NISQNK+I       ++I+I           NSNQEK E+    NL SDL
Sbjct: 1528 FHFYFYFYE-NISQNKSININKNKNENIQISSNQQDYFKSENSNQEKNEQQGQENLGSDL 1586

Query: 857  RKESQKKYPQEDYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINN 678
            RK+++KK  +++Y R DI            KE ELD FLKKYFLFQLRWDD +N +MINN
Sbjct: 1587 RKQNKKKNVEDNYARSDIKKGKKKKQSKKKKEAELDFFLKKYFLFQLRWDDSMNLRMINN 1646

Query: 677  IKVYCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRD 498
            IKVYCLLLRLINPR+IAISSI+R EMHLDVMLIQKDLALT+LIK+GI IIEPIRLS++RD
Sbjct: 1647 IKVYCLLLRLINPRKIAISSIQRGEMHLDVMLIQKDLALTELIKRGILIIEPIRLSIKRD 1706

Query: 497  GKFIIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVP 324
            GK+IIYQT+GISL+DK KHQ  RK IKKRYVDK N  K   RHGNM V+G + +YDFLVP
Sbjct: 1707 GKYIIYQTLGISLIDKIKHQTKRKCIKKRYVDKKNFDKPIARHGNMLVDGDKSHYDFLVP 1766

Query: 323  ENILSPKRRRELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRL--NTDPNKF 150
            ENI+SP+RRRELRILICFNSHNW+ V+RN VFCNENNIRNS +FLN+DK    NTD NKF
Sbjct: 1767 ENIISPRRRRELRILICFNSHNWNFVDRNLVFCNENNIRNSGKFLNEDKHFNTNTDTNKF 1826

Query: 149  IKCKFFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRII 12
            IKCK FLWPNYRLEDLAC+NRYWF+TNNGS FSMSRI MYP FRI+
Sbjct: 1827 IKCKLFLWPNYRLEDLACMNRYWFNTNNGSRFSMSRIYMYPCFRIV 1872


>gb|AHA12896.1| hypothetical chloroplast RF19 (plastid) [Maranta leuconeura]
          Length = 1902

 Score =  529 bits (1363), Expect = e-169
 Identities = 277/397 (69%), Positives = 315/397 (79%), Gaps = 13/397 (3%)
 Frame = -3

Query: 1163 LQQEINLSNQKKK-----MDWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPI 999
            + +E+N SN+KKK     +DW+GMNR    CT SNLE WFFPEFVLPFD YK KPWIIPI
Sbjct: 1508 IYREMNPSNKKKKKKKDFLDWMGMNRNS--CTISNLESWFFPEFVLPFDVYKIKPWIIPI 1565

Query: 998  KLLFSNI--YYYENEKNISQNKNIKDSIKIEFTNSNQEKKEKANLVSDLRKESQKKYPQE 825
            KLL SNI   Y EN+KNISQNKNIKDS+K+EF NSNQEK E+    + +  ++QKK+ +E
Sbjct: 1566 KLLLSNIDCNYNENKKNISQNKNIKDSMKMEFQNSNQEKNEEKGQSNLVSNQNQKKHLEE 1625

Query: 824  DYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNIKVYCLLLRLI 645
            +Y + DI            KE ELDLFLKKYF FQ++ D  LNQK+INNIK+Y LLLRLI
Sbjct: 1626 NYMKSDIKKGQNKKKSKKNKESELDLFLKKYFRFQIKMDSFLNQKIINNIKIYSLLLRLI 1685

Query: 644  NPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKFIIYQTIGI 465
            NP+EI ISSI++ EM +D++  QK LAL +LIKKGIF IE  RLSLRRDGKFIIYQTIGI
Sbjct: 1686 NPKEITISSIQKSEMCIDLVANQKGLALRELIKKGIFSIELSRLSLRRDGKFIIYQTIGI 1745

Query: 464  S--LVDKSKHQINRKYIKKRYVDKN--NKSTGRHGNMFVNGYQDYYDFLVPENILSPKRR 297
               LVDKSKHQIN+KYIKKRYVDK   NKS GRHGNMFVNG Q++YDFLVPENILSP+RR
Sbjct: 1746 GILLVDKSKHQINKKYIKKRYVDKKNFNKSIGRHGNMFVNGDQNHYDFLVPENILSPRRR 1805

Query: 296  RELRILICFNS--HNWDVVNRNPVFCNENNIRNSAQFLNKDKRLNTDPNKFIKCKFFLWP 123
            RELRILICFNS  HN DVVN N VF NENNIRNSAQF N+DK LNT+  K IKCK FLWP
Sbjct: 1806 RELRILICFNSYTHNLDVVNGNTVFFNENNIRNSAQFFNEDKCLNTNSKKLIKCKLFLWP 1865

Query: 122  NYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRII 12
            NYRLEDLAC+NRYWFDTNNGS FSMSRI+MYP F+II
Sbjct: 1866 NYRLEDLACMNRYWFDTNNGSRFSMSRIHMYPRFKII 1902


>ref|YP_009247719.1| hypothetical chloroplast RF19 (plastid) [Salacca ramosiana]
 gb|AMW65685.1| hypothetical chloroplast RF19 (plastid) [Salacca ramosiana]
          Length = 1854

 Score =  528 bits (1361), Expect = e-169
 Identities = 272/402 (67%), Positives = 312/402 (77%), Gaps = 19/402 (4%)
 Frame = -3

Query: 1163 LQQEINLSNQKKKM-DWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLF 987
            + Q I  SNQK    DW+GMN+E+V+CT SNLE WFFPEFV  FDAYK KPWIIPIKLL 
Sbjct: 1452 IHQGIKPSNQKSVFFDWMGMNQEKVFCTISNLEPWFFPEFVPFFDAYKIKPWIIPIKLLL 1511

Query: 986  SNIYYYEN---EKNISQNKNIKDSIKIEFT--------NSNQEKKEKA---NLVSDLRKE 849
             + Y+YEN    K+I+ NKN  ++I+I           NSNQEK E+    NL SDL+K+
Sbjct: 1512 FHFYFYENISQNKSININKNKNENIQISSNQQDYFKSENSNQEKNEQQGQENLGSDLQKQ 1571

Query: 848  SQKKYPQEDYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNIKV 669
             +KK  +++Y R DI            KE ELD FLKKYFLFQLRWDD +N +MINNIKV
Sbjct: 1572 KKKKNVEDNYARSDIKKGKKKKQSKKKKEAELDFFLKKYFLFQLRWDDSMNLRMINNIKV 1631

Query: 668  YCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDGKF 489
            YCLLLRLINPR+IAISSI+R EMHLDVMLIQKDLALT+LIK+GI IIEPIRLS++RDGK+
Sbjct: 1632 YCLLLRLINPRKIAISSIQRGEMHLDVMLIQKDLALTELIKRGILIIEPIRLSIKRDGKY 1691

Query: 488  IIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVPENI 315
            IIYQT+GISL+DK KHQ  RK IKKRYVDK N  K   RHGN  V+G + +YDFLVPENI
Sbjct: 1692 IIYQTLGISLIDKIKHQTKRKCIKKRYVDKKNFDKPIARHGNTLVDGEKSHYDFLVPENI 1751

Query: 314  LSPKRRRELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRL--NTDPNKFIKC 141
            LSP+RRRELRILICFNS NW+ V+RN VFCNENNIRNS +FLN+DK    NTD NKFIKC
Sbjct: 1752 LSPRRRRELRILICFNSRNWNFVDRNLVFCNENNIRNSGKFLNEDKHFNTNTDTNKFIKC 1811

Query: 140  KFFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRI 15
            K FLWPNYRLEDLAC+NRYWF+TNNGS FSMSRI MYP FRI
Sbjct: 1812 KLFLWPNYRLEDLACMNRYWFNTNNGSRFSMSRIYMYPRFRI 1853


>ref|YP_009248322.1| hypothetical chloroplast RF19 (plastid) [Leucothrinax morrisii]
 gb|AMW66374.1| hypothetical chloroplast RF19 (plastid) [Leucothrinax morrisii]
          Length = 1878

 Score =  528 bits (1359), Expect = e-169
 Identities = 275/404 (68%), Positives = 314/404 (77%), Gaps = 21/404 (5%)
 Frame = -3

Query: 1163 LQQEINLSNQKKKM-DWIGMNRERVYCTTSNLELWFFPEFVLPFDAYKTKPWIIPIKLLF 987
            + Q I  S+QKK   DW+GMN+E+VY T SNLE  FFPEFV  FDAYK KPWIIPIKLL 
Sbjct: 1476 IHQGIKPSHQKKHFFDWMGMNQEKVYRTISNLEPRFFPEFVPLFDAYKIKPWIIPIKLLL 1535

Query: 986  SNIYYYENEK-----NISQNK--------NIKDSIKIEFTNSNQEKKEKA---NLVSDLR 855
             N Y+YEN       NI+QNK        N K+ +K+E  NSNQEK E+    NL SD++
Sbjct: 1536 FNFYFYENISQNKSININQNKKKNLQISSNQKEYLKLE--NSNQEKNEQQGQENLGSDIQ 1593

Query: 854  KESQKKYPQEDYTRPDIXXXXXXXXXXXXKERELDLFLKKYFLFQLRWDDPLNQKMINNI 675
            K+++KK  +++Y   DI            KE ELD FLKK+FLFQLRWDD LNQ+MINNI
Sbjct: 1594 KQNKKKNVEDNYAGSDIKKGKKKKQSKKKKEAELDFFLKKFFLFQLRWDDSLNQRMINNI 1653

Query: 674  KVYCLLLRLINPREIAISSIERREMHLDVMLIQKDLALTQLIKKGIFIIEPIRLSLRRDG 495
            KVYCLLLRLINPR+IAISSI+R EMHLDVMLIQKDLALT+LIKKG+ IIEPIRLS++RDG
Sbjct: 1654 KVYCLLLRLINPRKIAISSIQRGEMHLDVMLIQKDLALTELIKKGVLIIEPIRLSIKRDG 1713

Query: 494  KFIIYQTIGISLVDKSKHQINRKYIKKRYVDKNN--KSTGRHGNMFVNGYQDYYDFLVPE 321
            KFIIYQT+GISL+DK KHQ NRK IKKRYVDK N  K   RHGNM V+G +  YDF VPE
Sbjct: 1714 KFIIYQTLGISLIDKMKHQTNRKCIKKRYVDKKNFDKPVARHGNMLVDGDKSNYDFFVPE 1773

Query: 320  NILSPKRRRELRILICFNSHNWDVVNRNPVFCNENNIRNSAQFLNKDKRL--NTDPNKFI 147
            NILSP+RRRELRILICFNS NW+ V+RNPVFCNENNIRN  +FLN+DK    NTD NKFI
Sbjct: 1774 NILSPRRRRELRILICFNSRNWNFVDRNPVFCNENNIRNYGKFLNEDKHFNTNTDTNKFI 1833

Query: 146  KCKFFLWPNYRLEDLACLNRYWFDTNNGSHFSMSRINMYPHFRI 15
            KCKFFLWPNYRLEDLAC+NRYWF+TNNG+ FSMSRI MYP FRI
Sbjct: 1834 KCKFFLWPNYRLEDLACMNRYWFNTNNGNRFSMSRIYMYPRFRI 1877