BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00032196
         (2831 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009386584.1| PREDICTED: RNA polymerase II C-terminal doma...   764   0.0  
ref|XP_009421039.1| PREDICTED: RNA polymerase II C-terminal doma...   747   0.0  
ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal doma...   571   0.0  
ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal doma...   570   0.0  
ref|XP_020686051.1| RNA polymerase II C-terminal domain phosphat...   437   e-132
ref|XP_020686052.1| RNA polymerase II C-terminal domain phosphat...   430   e-129
ref|XP_020580756.1| RNA polymerase II C-terminal domain phosphat...   409   e-121
ref|XP_020580757.1| RNA polymerase II C-terminal domain phosphat...   405   e-120
ref|XP_020111428.1| RNA polymerase II C-terminal domain phosphat...   399   e-118
ref|XP_020111427.1| RNA polymerase II C-terminal domain phosphat...   399   e-118
ref|XP_020246902.1| RNA polymerase II C-terminal domain phosphat...   367   e-107
gb|OAY70586.1| RNA polymerase II C-terminal domain phosphatase-l...   326   4e-97
ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   325   8e-91
ref|XP_020254496.1| RNA polymerase II C-terminal domain phosphat...   315   4e-88
dbj|BAT14211.1| Os11g0521900, partial [Oryza sativa Japonica Group]   306   1e-84
ref|XP_015617180.1| PREDICTED: RNA polymerase II C-terminal doma...   306   2e-84
dbj|BAT14213.1| Os11g0521900, partial [Oryza sativa Japonica Group]   298   2e-84
ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal doma...   301   1e-82
ref|XP_020192785.1| RNA polymerase II C-terminal domain phosphat...   301   2e-82
gb|EMS65645.1| RNA polymerase II C-terminal domain phosphatase-l...   298   3e-82

>ref|XP_009386584.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Musa acuminata subsp. malaccensis]
          Length = 1251

 Score =  764 bits (1973), Expect = 0.0
 Identities = 450/839 (53%), Positives = 536/839 (63%), Gaps = 25/839 (2%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRGSRXXXXXXXXXXXXXXXEEISAEDFKQEGRD 2343
            MRV GS+RF+LNPSEKETL +MARDR RG R               EEISA+DFK++ R 
Sbjct: 1    MRVPGSSRFFLNPSEKETLARMARDRPRGGRATEGEASDGDSSESLEEISADDFKKDTRT 60

Query: 2342 GRSRMWMGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXXXXXX 2163
            GRS +WMGY MS NY P+LYSFAWAQAVQNKPLGL+LMP+T                   
Sbjct: 61   GRSGVWMGYRMSNNYGPSLYSFAWAQAVQNKPLGLDLMPMTGGDLASKNDTSDRSAKEES 120

Query: 2162 XDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXESVVVDETTDLSSDKPQNXXXXXXXXXXX 1983
             DVI+                             V DE T++SSDK +N           
Sbjct: 121  CDVIVEDISQDGDDGMELEEGELEEGEIELGMEPVADEMTEVSSDKLENEPEKKETDGEE 180

Query: 1982 SQDIGDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGIESSDTVLHA 1803
            S+D+GDFDRRV LILEEL+ IT++EA  SF+ VC RLRKSFEDLKPMFTGIESSDTVL+A
Sbjct: 181  SEDMGDFDRRVSLILEELETITIDEALASFEDVCLRLRKSFEDLKPMFTGIESSDTVLNA 240

Query: 1802 LVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQVKEIDTLVNS 1623
            LVQQAFMGIQT YS L+S T  +KE N+QLLLRLLIHIKNQYSVL T EQVKEIDTLVN 
Sbjct: 241  LVQQAFMGIQTAYSVLNSDTFQRKELNQQLLLRLLIHIKNQYSVLLTSEQVKEIDTLVNL 300

Query: 1622 LVFEDQFKEKVQHGGSGNNMNNNTVLSKDPEISSGG----SKPYLGPKAVELYTLELPIP 1455
            LVFED  K+K QHGG G   NNN  LSK+P +SS G     KPYL PKAV L  L LP+P
Sbjct: 301  LVFEDHNKKKEQHGGIG---NNNLNLSKEPGVSSDGLVSLGKPYLAPKAVSLPMLGLPMP 357

Query: 1454 TASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPKXXXXXXXXXXXSHTI-----E 1290
               RNRVE+SPLLDLHADYDEDSLPSPTR+ +PRF +PK           S ++     E
Sbjct: 358  --PRNRVEFSPLLDLHADYDEDSLPSPTRETMPRFPVPKPVGHAMVPVLSSQSLTAKSEE 415

Query: 1289 AEDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEGVKEDDSHDEVCSSSVA 1110
            AE A    YVTDALKAVS YQ K+G            PTPSEEG K+DDSH+EV SSSVA
Sbjct: 416  AEGATSQLYVTDALKAVSFYQQKYGKNSILSNNRLPSPTPSEEGDKDDDSHEEVSSSSVA 475

Query: 1109 ANVRTVNIAASPVVMSSC-SDQLNS-------VKLVGQVSTESKPVLKPALKSRDPRLKF 954
             N +T   A   V  SS  +   NS       VKL  QV + +KP +KPALK RDPRL+F
Sbjct: 476  GNAKTFYTATQQVSKSSSNATHTNSSPVDRCPVKLAEQVQSGTKPAVKPALKRRDPRLRF 535

Query: 953  MKSEVRGSSEGNRG----ALDNVIAIGTPNVRKHKTFDDPFA-GDHIMKRQRNGFTSSRD 789
            M +EVRG SE   G    A D+    GT N RKHK  D+  A  D  MKRQRNG  SSR+
Sbjct: 536  MNNEVRGPSEERSGIRCNAPDDGFLGGTINARKHKIADESAAVVDQTMKRQRNGSMSSRN 595

Query: 788  MQITSGGGGPLEDSSITSESSDKNQANEKFQVDMRKPGTSIVGSDRNLVSKSNFSVLNGX 609
            M + SG    LE  SI  + S+++Q NE    D+RK GT  VG D+   S +NFS+LNG 
Sbjct: 596  MHVISGSSEWLEGDSIIPQPSERSQVNENLHADIRKAGTGEVGFDKEPNSNANFSMLNGL 655

Query: 608  XXXXXXXXXXXXXXXXXLKAVNPTILMQLHQMEQKRIAAENQQKANASLSVMETVPNENG 429
                             LKAVNPTIL+QL +MEQ+R+AAENQQ    S S +  V + +G
Sbjct: 656  KPNSSSNPAGPISLPSLLKAVNPTILVQLLKMEQQRLAAENQQNVTTSTSDITNVSSVSG 715

Query: 428  LSGSVSSLITRP---EDAGTNQLGISQIAPQPTSVSTQNDIGRIRMKPRDPRRVLHNNML 258
            L G+VSS+I+ P    + G NQLGISQ++PQ  S+S+QND+GRIRMKPRDPRR+LHNN++
Sbjct: 716  LPGAVSSVISTPVRSNEPGQNQLGISQVSPQSASMSSQNDLGRIRMKPRDPRRILHNNIV 775

Query: 257  QKHDAVLLEQNPIDGATSRPQSSMECSSTRELAVQAHPKVIPTQFSSPPKVTQQLTKNL 81
            QK++ V  EQN I+GAT+ PQ +M   + RE   QA   ++PTQFS PP  +++LTKNL
Sbjct: 776  QKNEVVASEQNNINGATAGPQGTMGHLTAREAGEQAQSNILPTQFSPPPDRSEELTKNL 834


>ref|XP_009421039.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Musa acuminata subsp. malaccensis]
          Length = 1228

 Score =  747 bits (1928), Expect = 0.0
 Identities = 454/837 (54%), Positives = 526/837 (62%), Gaps = 23/837 (2%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRGSRXXXXXXXXXXXXXXXEEISAEDFKQEGRD 2343
            MRV G+ RF+LNPSEKETL +MA D  RG R               EEISAEDFKQE R 
Sbjct: 1    MRVSGTNRFFLNPSEKETLARMATDCPRGGRAADGETSDGDSSQSLEEISAEDFKQEARA 60

Query: 2342 GRSRMWMGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXXXXXX 2163
            GRS ++MGYPMSKNY P+LYSFAWAQAV+NKPLGL+L P                     
Sbjct: 61   GRSSVFMGYPMSKNYGPSLYSFAWAQAVRNKPLGLDLTPTRAGDLAVKNDSGVKPEKEEA 120

Query: 2162 XDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXES-VVVDETTDLSSDKPQNXXXXXXXXXX 1986
             DVII                             ++VDE TD+SSDK +N          
Sbjct: 121  CDVIIEDSSQEDDSAMEKEEGELEEGEVDFGSEPMMVDEATDVSSDKHENEPEKKESDGE 180

Query: 1985 XSQDIGDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGIESSDTVLH 1806
             SQ   DFDRRV LILEEL+ IT+EEAE SF+GVC+RLRKSFEDLKPMFTGIESSDTVLH
Sbjct: 181  ESQGFDDFDRRVSLILEELEMITMEEAEASFEGVCARLRKSFEDLKPMFTGIESSDTVLH 240

Query: 1805 ALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQVKEIDTLVN 1626
            A+VQQA MGIQT YSAL S   ++KEQNKQLLLRLLIHIKNQY  L TPEQV+EIDTLVN
Sbjct: 241  AVVQQAVMGIQTTYSALDSFA-IQKEQNKQLLLRLLIHIKNQYYTLLTPEQVREIDTLVN 299

Query: 1625 SLVF-EDQFKEKVQHGGSGNNMNNNTVLSKDPEISSGGSKPYLGPKAVELYTLELPIPTA 1449
            SLVF ED  KEK QHG       +  V  + P  +S         K V L  LE P P  
Sbjct: 300  SLVFEEDHDKEKEQHG-------DGLVCLETPCRAS---------KTVNLPNLEFPTP-- 341

Query: 1448 SRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPKXXXXXXXXXXXSH-----TIEAE 1284
            SRNRVE+SPLLDLHADYD DSLPSPTR+NLP+FSIPK           S        EAE
Sbjct: 342  SRNRVEFSPLLDLHADYDADSLPSPTRENLPQFSIPKPIGLGMLPVVSSQPRTAKNEEAE 401

Query: 1283 DAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEGVKEDDSHDEVCSSSVAAN 1104
            +A + PYVTDALKAVS YQ ++G            PTPSEEG K+DDSH+E  SSSV +N
Sbjct: 402  EATLHPYVTDALKAVSCYQQRYGSTSFLSINRLPSPTPSEEGDKDDDSHEEASSSSVVSN 461

Query: 1103 VRTVNIAASPVVMSS----CS-----DQLNSVKLVGQVSTESKPVLKPALKSRDPRLKFM 951
              T     +  V SS    CS     DQ   VKLVGQV + SK   KPALK RDPRLK M
Sbjct: 462  AETACTIQNQAVKSSSTAACSNSSAGDQPYPVKLVGQVGSGSKSSAKPALKRRDPRLKLM 521

Query: 950  KSEVRGSSEGNRG----ALDNVIAIGTPNVRKHKTFDDPFAGDHIMKRQRNGFTSSRDMQ 783
             +EVRG S G++G    ALDN +  G+ N RKHK+ D+P  GDH MKRQ+NGFT SRDMQ
Sbjct: 522  NNEVRGPSVGDKGIDSNALDNRLVGGSMNTRKHKSVDEPVTGDHKMKRQKNGFTGSRDMQ 581

Query: 782  ITSGGGGPLEDSSITSESSDKNQANEKFQVDMRKPGTSIVGSDRNLVSKSNFSVLNGXXX 603
            +TSG GG LEDSSI  + SD+NQ NE FQV++RKPG+  VGS +   S  NFS+LNG   
Sbjct: 582  MTSGRGGWLEDSSI-PQPSDRNQINENFQVEVRKPGSGEVGSGKKSDSNMNFSMLNGLIP 640

Query: 602  XXXXXXXXXXXXXXXLKAVNPTILMQLHQMEQKRIAAENQQKANASLSVMETVPNENGLS 423
                           LKAVNPTI +QL QMEQ R+AAEN Q   AS S +  V   NGL 
Sbjct: 641  NPSGNLPNTLSLPPLLKAVNPTIFVQLLQMEQHRLAAENHQIVTASTSDVTNVSKVNGLP 700

Query: 422  GSVSSLITRP---EDAGTNQLGISQIAPQPTSVSTQNDIGRIRMKPRDPRRVLHNNMLQK 252
            G+VSS+ + P   ++ G N LG+SQI  Q  SVS+QND+GRIRMKPRDPRR LHNNM+Q 
Sbjct: 701  GAVSSVNSTPLKSQEVGQNHLGMSQIPSQSASVSSQNDVGRIRMKPRDPRRALHNNMVQM 760

Query: 251  HDAVLLEQNPIDGATSRPQSSMECSSTRELAVQAHPKVIPTQFSSPPKVTQQLTKNL 81
             + ++ EQN I+ A   PQSSM  S+ RE   QA   V+ TQF   P +++QLTKNL
Sbjct: 761  KNVIVSEQNKINEAIPGPQSSMGHSTAREPGEQAQASVLATQFVPQPNMSRQLTKNL 817


>ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Elaeis guineensis]
          Length = 1268

 Score =  571 bits (1471), Expect = 0.0
 Identities = 382/854 (44%), Positives = 475/854 (55%), Gaps = 55/854 (6%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRG--SRXXXXXXXXXXXXXXXEEISAEDFKQEG 2349
            MRV GS RF+LNPSEKETL +MARDR RG  +R               EEISAEDFKQ+ 
Sbjct: 1    MRVAGSNRFFLNPSEKETLARMARDRPRGGANRAGEGEISDGDSSASLEEISAEDFKQDA 60

Query: 2348 R-DGRSRMWMGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXXX 2172
            R   RS++W+GYPMS+NYAPNLYSFAWAQAVQNKPLGL+L P+                 
Sbjct: 61   RAPPRSKVWVGYPMSRNYAPNLYSFAWAQAVQNKPLGLDLKPMGSADSPAKSAGGKLVKE 120

Query: 2171 XXXXDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXESVVVDETTDLSSDKPQNXXXXXXXX 1992
                 V                               V  E  DLS DKP+N        
Sbjct: 121  EAYNVV---DSSEESGGGTEKEEGELEEGEIGFGSEPVGGEIIDLSIDKPENGSESEEKE 177

Query: 1991 XXXSQ--DIGDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGIESSD 1818
                +  +IG+FDRRV LILEEL+ +T EE E SFDGVCSRLR+SFE LKPMF   ES  
Sbjct: 178  LDGKETEEIGEFDRRVSLILEELETVTEEEVEKSFDGVCSRLRQSFEMLKPMFAETESPV 237

Query: 1817 TVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQVKEID 1638
             VL ALVQQAF GI+T++S L S  + KKEQNK LLLRLLIHIKNQYS + +PEQVKEID
Sbjct: 238  PVLDALVQQAFAGIKTVHSVLGSENLKKKEQNKDLLLRLLIHIKNQYSNILSPEQVKEID 297

Query: 1637 TLVNSLVFE-DQFKEKVQHGGSGNNMNNNTVLSKDPEIS--------SGGSKPYLGPKAV 1485
            T V SLVFE D +KE   H GSG N N+ T L++  +IS        +  +   +G K V
Sbjct: 298  TRVQSLVFEDDSYKESKLHAGSGTNTNDKTHLAEKSDISPHSLVSSENSLADSSIGSKNV 357

Query: 1484 ELYTLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPKXXXXXXXXXXX 1305
            +     L  PT SR R+  SPLLDLHA+YDE++LPSPTR+N P   I K           
Sbjct: 358  KAGLPNLDTPTISRGRM-VSPLLDLHAEYDEENLPSPTRENAPPLPIHKPIGFGTGTVVF 416

Query: 1304 SH-----TIEAEDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEGVKEDDS 1140
            +       +EAED    PY+TDA KAVSSYQ K+             PTPSEEG  +DD+
Sbjct: 417  TEPITPKNVEAEDDTPHPYITDAFKAVSSYQQKY----FFASNRLPSPTPSEEGNDKDDA 472

Query: 1139 HDEVCSSSVAANVRTVNIAASPVVM--------SSCSDQLNSVKLVGQVSTESKPVLKPA 984
            HDEV SSS   N   VN  +   V         SS S Q  +VK VGQ+ +      +PA
Sbjct: 473  HDEVSSSSANRNAGCVNTTSQIQVATSSAACTDSSSSHQPGTVKPVGQLGSAPNLATRPA 532

Query: 983  LKSRDPRLKFMKSEVRGSSEGN-------RGALDNVIAIGTPNVRKHKTFDDPFAGDHIM 825
            LKSRDPRL+F+ SE   +S+ N         A +N    G  N RKHK  D+    +H +
Sbjct: 533  LKSRDPRLRFVSSESGSASDPNTQVMSLDSSAPNNGPVGGITNPRKHKAVDESLPENHTL 592

Query: 824  KRQRNGFTSSRDMQITSG-GGGPLEDSS-ITSESSDKNQANEKFQVDMRKPGTSIVGSDR 651
            KRQRNG T+S D+Q+  G GGG L+DSS + S+ SDK + +E  +++ + P  S+VGSDR
Sbjct: 593  KRQRNGLTNSGDVQMIPGRGGGWLDDSSAVGSQPSDKIRLSENMEIETKNP-VSVVGSDR 651

Query: 650  NLVSKSNFSVLNGXXXXXXXXXXXXXXXXXXLK---------------AVNPTILMQLHQ 516
               S  N  V N                                    AVNPT+LMQL Q
Sbjct: 652  RPDSNPNIHVSNTGTCPIPSSTAAPASSTAPSSSAAASVSFPSLLKDIAVNPTMLMQLIQ 711

Query: 515  MEQKRIAAENQQKANASLSVMETVPNENGLSGSVSSLIT---RPEDAGTNQLGISQIAPQ 345
            MEQ+R++AE QQK    +  M    + N LSG+VSS      +  + G N  G  Q+ PQ
Sbjct: 712  MEQQRLSAEAQQKTVGLMQNMAHASSLNVLSGAVSSATVASMKSTEVGQNPGGRPQVPPQ 771

Query: 344  PTSVSTQNDIGRIRMKPRDPRRVLHNNMLQKHDAVLLEQNPIDGA-TSRPQSSMECSSTR 168
              S ++Q+D+GRIRMKPRDPRRVLH NM+QK++ V+ E+   +G  +S PQSS + S+  
Sbjct: 772  TVSTNSQSDVGRIRMKPRDPRRVLH-NMVQKNETVVSERAKPNGTLSSDPQSSKDQSAIG 830

Query: 167  ELAVQAHPKVIPTQ 126
            E   QA    +PTQ
Sbjct: 831  EQGEQAQATTLPTQ 844


>ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Phoenix dactylifera]
          Length = 1269

 Score =  570 bits (1469), Expect = 0.0
 Identities = 383/862 (44%), Positives = 483/862 (56%), Gaps = 57/862 (6%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRG--SRXXXXXXXXXXXXXXXEEISAEDFKQEG 2349
            MRV GS+RF+LNPSEKETL  MARDR RG  +R               EEISAEDFKQ+ 
Sbjct: 1    MRVAGSSRFFLNPSEKETLTWMARDRPRGGANRAGEGEISDGDSSASLEEISAEDFKQDA 60

Query: 2348 RDGR-SRMWMGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXXX 2172
            RD   S++W+GYPMS+NYAPNLYSFAWAQAVQNKPLGL+L P+                 
Sbjct: 61   RDPPGSKVWVGYPMSRNYAPNLYSFAWAQAVQNKPLGLDLKPVGSADPPAKSAGGKPVKE 120

Query: 2171 XXXXDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXESVVVDETTDLSSDKPQNXXXXXXXX 1992
                 V                               V  E  DLSSDK ++        
Sbjct: 121  EAYNVV---DSSEESGGGTEKEEGELEEGEIGFGSEPVGGEIIDLSSDKQEDGSESEEKK 177

Query: 1991 XXXS---QDIGDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGIESS 1821
                   ++IG+FDRRV LILEEL+ +T EEAE SFDGVC RLR+SFE LKPMF   ES 
Sbjct: 178  LLGGKETEEIGEFDRRVSLILEELETVTEEEAEKSFDGVCLRLRQSFEMLKPMFAETESP 237

Query: 1820 DTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQVKEI 1641
              VL ALVQQAF GI+T++S L S  + KKEQNK  LLRLLIHIKNQYS + +PEQVKEI
Sbjct: 238  VPVLDALVQQAFEGIKTVHSVLRSENLKKKEQNKDFLLRLLIHIKNQYSNILSPEQVKEI 297

Query: 1640 DTLVNSLVFEDQF-KEKVQHGGSGNNMNNNTVLSKDPEISSGGSKPY--------LGPKA 1488
            DT V SLVFED   KE   + GSG N N+ T L + P+ISS G            +G K 
Sbjct: 298  DTRVQSLVFEDDSNKESKLYAGSGTNTNDKTHLPEKPDISSFGLVSSGNSHVVSSIGSKN 357

Query: 1487 VELYTLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPKXXXXXXXXXX 1308
            V+    +L  PT SR R+  SPLLDLHA+YDE+SLPSPTR+N P   I K          
Sbjct: 358  VQAGLPKLDTPTISRGRI-VSPLLDLHAEYDEESLPSPTRENAPPLPIHKPIGFGTGTVV 416

Query: 1307 XSHTI-----EAEDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEGVKEDD 1143
             +  I     EAED    PY+TDA KAVSSYQ K+             PTPSEE   +DD
Sbjct: 417  FTEPITTKNVEAEDDTPHPYITDAFKAVSSYQQKY----FFTSNKLPSPTPSEECDDKDD 472

Query: 1142 SHDEVCSSSVAANVRTVNIAASPVVMSS---CSD-----QLNSVKLVGQVSTESKPVLKP 987
            +HDEV SSS   N   VN  +   V ++   C+D     Q   VK VGQ+ +   P ++P
Sbjct: 473  AHDEVSSSSANGNAGCVNTTSEIQVATNSAACTDSSSRHQPGPVKPVGQLGSAPNPAIRP 532

Query: 986  ALKSRDPRLKFMKSEVRGSSEGNRGAL-------DNVIAIGTPNVRKHKTFDDPFAGDHI 828
            ALKSRDPRL+F+ SE   +S+ NR A+       +N +  G  N RKHK  D+ F  +H 
Sbjct: 533  ALKSRDPRLRFVNSESGNASDPNRRAMSLDFSAPNNDLVGGITNPRKHKAVDESFPENHT 592

Query: 827  MKRQRNGFTSSRDMQITSG-GGGPLEDSS-ITSESSDKNQANEKFQVDMRKPGTSIVGSD 654
            +KRQ+NG T+S D+Q+T G GGG LEDSS + S+ SDK + NE  +++++ PG ++V SD
Sbjct: 593  LKRQKNGLTNSSDVQMTPGRGGGWLEDSSSVRSQLSDKIRLNENMEIEIKNPG-NVVMSD 651

Query: 653  RNLVSKSNFSVLN---------------GXXXXXXXXXXXXXXXXXXLKAVNPTILMQLH 519
            R   S  N  V N               G                    AVNPT+LMQL 
Sbjct: 652  RRPDSNPNIQVTNTGTCMIPSSTTAPSSGTAPSSSAAASVSFPSLLKDIAVNPTMLMQLI 711

Query: 518  QMEQKRIAAENQQKANASLSVMETVPNENGLSGSVSSLIT---RPEDAGTNQLGISQIAP 348
            Q+EQ+R++AE QQK    +  M    + N L G+VSS      +  + G N  G  Q+  
Sbjct: 712  QIEQQRLSAEAQQKTVGLMHNMAHASSLNVLPGAVSSANVASMKSAEVGHNPSGRPQVTA 771

Query: 347  QPTSVSTQNDIGRIRMKPRDPRRVLHNNMLQKHDAVLLEQNPIDGA-TSRPQSSMECSST 171
            Q  S ++Q+D+GRIRMKPRDPRR+LH NM+QK++ ++ E+   +G  +S PQSS +  + 
Sbjct: 772  QTVSTNSQSDVGRIRMKPRDPRRILH-NMVQKNETIVSERAKPNGTLSSDPQSSKDHLAI 830

Query: 170  RELAVQAHPKVIPT-QFSSPPK 108
             E   QA    +PT Q +  PK
Sbjct: 831  GEQGEQAQATGLPTLQLAKNPK 852


>ref|XP_020686051.1| RNA polymerase II C-terminal domain phosphatase-like 3 isoform X1
            [Dendrobium catenatum]
 gb|PKU85434.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Dendrobium
            catenatum]
          Length = 1206

 Score =  437 bits (1124), Expect = e-132
 Identities = 310/816 (37%), Positives = 414/816 (50%), Gaps = 26/816 (3%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRGSRXXXXXXXXXXXXXXXEEISAEDFKQEGRD 2343
            MR+  S RF LNPSEK+TL +MAR+    +                EEISAEDF+Q+GR 
Sbjct: 1    MRMPRSNRFLLNPSEKKTLARMARNGSHMNGGDKGEISDGDSSASLEEISAEDFRQDGRR 60

Query: 2342 GRSRMW----MGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXX 2175
             RSR+W    MGY ++ N+ PNLYSFAWAQAVQNKPLGL + P+                
Sbjct: 61   SRSRVWDDGMMGYSVANNFGPNLYSFAWAQAVQNKPLGLEMKPVKDAEVETGKEGALDAD 120

Query: 2174 XXXXXDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXESVVVDETTDLSSDKPQNXXXXXXX 1995
                 +  +                             V +E  +L+SDK ++       
Sbjct: 121  TGDSTEDSVGEMEKEEGELEEGEIDLDSEP--------VAEEMINLASDKIKDELKPQAS 172

Query: 1994 XXXXSQD-----IGDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGI 1830
                S+D     + DFDRRV  ILEELD IT EEAE S +GVC RL KSF  LK MF   
Sbjct: 173  ETKESEDKEEADVEDFDRRVAEILEELDTITSEEAEASLEGVCFRLLKSFAGLKTMFA-- 230

Query: 1829 ESSDTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQV 1650
            E    +L ALVQQAFMGIQT++S   S  + K +QN  LLLRLLIHIKNQYSVL T EQV
Sbjct: 231  EGQVPILDALVQQAFMGIQTLHSVFCSGNLKKTKQNVNLLLRLLIHIKNQYSVLLTKEQV 290

Query: 1649 KEIDTLVNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPEISSGGSKPYLGPKAVELYTL 1470
             EID++   LV  D  KEK        ++             SGG         + L   
Sbjct: 291  TEIDSMAQLLVSNDISKEKPDLDLRETDLRG---------CHSGG---------MFLPKF 332

Query: 1469 ELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPKXXXXXXXXXXXSHTI- 1293
            ELP+   +R+RVE+SPLLDLHADY+E +LPSPTR+N P   I K                
Sbjct: 333  ELPL---TRSRVEFSPLLDLHADYEEGNLPSPTRENAPPLIIQKPIGFGTPAVSLPTVFK 389

Query: 1292 --EAEDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEGVKEDDSHDEVCSS 1119
              E ED  +  Y+ DALKAVSSYQ K+G            PTPSEE   ED+ HDEV SS
Sbjct: 390  NEEEEDTTLHSYMNDALKAVSSYQQKYGRTSILPSNQLPSPTPSEECSYEDEKHDEVSSS 449

Query: 1118 SVAANVRTVNIAASPVVMSSCSDQLNSV--------KLVGQVSTESKPVLKPALKSRDPR 963
                N ++V  +  PV     S+  + +        K+ GQ+++    V+K   KSRDPR
Sbjct: 450  FAVGNTKSVKGSLKPVGSCGSSNSADGLTGFPSAPNKMAGQLNSLQNDVVKA--KSRDPR 507

Query: 962  LKFMKSEVRGSSEGNRGALDNVIAIGTPNVRKHKTFDDPFAGDHIMKRQRNGFTSSRDMQ 783
            L+F+   V  SS+ N     +V   G  N +KHK  D     DH +KRQR   + + D+ 
Sbjct: 508  LRFINPNVGVSSDQNMSRNGHVE--GQINYKKHKAADVIMQDDHPLKRQRQSSSVTTDI- 564

Query: 782  ITSGGGGPLEDSSITSESSDKNQANEKFQVDMRKPGTSIVGSDRNLVSKSNFSVLNGXXX 603
                   P+  SS+TSE+  K    E  +V MRKPG +   +D  L +  N    N    
Sbjct: 565  -------PVNMSSVTSETISKLHLTESMEVGMRKPGNAAAITDTRLDATGNCIGANPVTE 617

Query: 602  XXXXXXXXXXXXXXXLKA---VNPTILMQLHQMEQKRIAAENQQKANASLSVMETVPNEN 432
                           L     ++P +LM+L +++Q+ +A E+QQK+  S      + + N
Sbjct: 618  QNPAISSAPAVSLPSLLKEMDISPEMLMELIKIKQQSLAVESQQKSGISAGAAVQLKSSN 677

Query: 431  GLSGSVSSL---ITRPEDAGTNQLGISQIAPQPTSVSTQNDIGRIRMKPRDPRRVLHNNM 261
            GL GS+SS+      P + G N    +QI+ Q  S++ QND GR+RMKPRDPRR+LH+++
Sbjct: 678  GLPGSISSINGVTLNPMEIGQNASSKTQISAQNASLNPQNDAGRLRMKPRDPRRILHDSI 737

Query: 260  LQKHDAVLLEQNPIDGATSRPQSSMECSSTRELAVQ 153
            +QK +A   +QN +    S  Q + +  + R+L  Q
Sbjct: 738  IQKSEASPSDQNKMGAMPSSSQINKDRITDRDLGEQ 773


>ref|XP_020686052.1| RNA polymerase II C-terminal domain phosphatase-like 3 isoform X2
            [Dendrobium catenatum]
          Length = 1203

 Score =  430 bits (1105), Expect = e-129
 Identities = 309/816 (37%), Positives = 412/816 (50%), Gaps = 26/816 (3%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRGSRXXXXXXXXXXXXXXXEEISAEDFKQEGRD 2343
            MR+  S RF LNPSEK+TL +MAR+    +                EEISAEDF+Q+GR 
Sbjct: 1    MRMPRSNRFLLNPSEKKTLARMARNGSHMNGGDKGEISDGDSSASLEEISAEDFRQDGRR 60

Query: 2342 GRSRMW----MGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXX 2175
             RSR+W    MGY ++ N+ PNLYSFAWAQAVQNKPLGL + P+                
Sbjct: 61   SRSRVWDDGMMGYSVANNFGPNLYSFAWAQAVQNKPLGLEMKPVKDAEVETGKEGALDAD 120

Query: 2174 XXXXXDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXESVVVDETTDLSSDKPQNXXXXXXX 1995
                 +  +                             V +E  +L+SDK ++       
Sbjct: 121  TGDSTEDSVGEMEKEEGELEEGEIDLDSEP--------VAEEMINLASDKIKDELKPQAS 172

Query: 1994 XXXXSQD-----IGDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGI 1830
                S+D     + DFDRRV  ILEELD IT EEAE S +GVC RL KSF  LK MF   
Sbjct: 173  ETKESEDKEEADVEDFDRRVAEILEELDTITSEEAEASLEGVCFRLLKSFAGLKTMFA-- 230

Query: 1829 ESSDTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQV 1650
            E    +L ALVQQAFMGIQT++S   S  + K +QN  LLLRLLIHIKNQYSVL T EQV
Sbjct: 231  EGQVPILDALVQQAFMGIQTLHSVFCSGNLKKTKQNVNLLLRLLIHIKNQYSVLLTKEQV 290

Query: 1649 KEIDTLVNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPEISSGGSKPYLGPKAVELYTL 1470
             EID++   LV  D  KEK        ++             SGG         + L   
Sbjct: 291  TEIDSMAQLLVSNDISKEKPDLDLRETDLRG---------CHSGG---------MFLPKF 332

Query: 1469 ELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPKXXXXXXXXXXXSHTI- 1293
            ELP+   +R+RVE+SPLLDLHADY+E +LPSPTR+N P   I K                
Sbjct: 333  ELPL---TRSRVEFSPLLDLHADYEEGNLPSPTRENAPPLIIQKPIGFGTPAVSLPTVFK 389

Query: 1292 --EAEDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEGVKEDDSHDEVCSS 1119
              E ED  +  Y+ DALKAVSSYQ K+G            PTPSEE   ED+ HDEV SS
Sbjct: 390  NEEEEDTTLHSYMNDALKAVSSYQQKYGRTSILPSNQLPSPTPSEECSYEDEKHDEVSSS 449

Query: 1118 SVAANVRTVNIAASPVVMSSCSDQLNSV--------KLVGQVSTESKPVLKPALKSRDPR 963
                N ++V  +  PV     S+  + +        K+ GQ+++    V+K   KSRDPR
Sbjct: 450  FAVGNTKSVKGSLKPVGSCGSSNSADGLTGFPSAPNKMAGQLNSLQNDVVKA--KSRDPR 507

Query: 962  LKFMKSEVRGSSEGNRGALDNVIAIGTPNVRKHKTFDDPFAGDHIMKRQRNGFTSSRDMQ 783
            L+F+   V  SS+ N     +V   G  N +KHK  D     DH +KRQR   + + D+ 
Sbjct: 508  LRFINPNVGVSSDQNMSRNGHVE--GQINYKKHKAADVIMQDDHPLKRQRQSSSVTTDI- 564

Query: 782  ITSGGGGPLEDSSITSESSDKNQANEKFQVDMRKPGTSIVGSDRNLVSKSNFSVLNGXXX 603
                   P+  SS+TSE+  K    E  +V MRKPG +   +D  L +  N    N    
Sbjct: 565  -------PVNMSSVTSETISKLHLTESMEVGMRKPGNAAAITDTRLDATGNCIGANPVTE 617

Query: 602  XXXXXXXXXXXXXXXLKA---VNPTILMQLHQMEQKRIAAENQQKANASLSVMETVPNEN 432
                           L     ++P +LM+L +++Q+ +A E+QQK+  S      + + N
Sbjct: 618  QNPAISSAPAVSLPSLLKEMDISPEMLMELIKIKQQSLAVESQQKSGISAGAAVQLKSSN 677

Query: 431  GLSGSVSSL---ITRPEDAGTNQLGISQIAPQPTSVSTQNDIGRIRMKPRDPRRVLHNNM 261
            GL GS+SS+      P + G N    +QI+ Q  S+   ND GR+RMKPRDPRR+LH+++
Sbjct: 678  GLPGSISSINGVTLNPMEIGQNASSKTQISAQNASL---NDAGRLRMKPRDPRRILHDSI 734

Query: 260  LQKHDAVLLEQNPIDGATSRPQSSMECSSTRELAVQ 153
            +QK +A   +QN +    S  Q + +  + R+L  Q
Sbjct: 735  IQKSEASPSDQNKMGAMPSSSQINKDRITDRDLGEQ 770


>ref|XP_020580756.1| RNA polymerase II C-terminal domain phosphatase-like 3 isoform X1
            [Phalaenopsis equestris]
          Length = 1218

 Score =  409 bits (1051), Expect = e-121
 Identities = 303/844 (35%), Positives = 416/844 (49%), Gaps = 30/844 (3%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRGSRXXXXXXXXXXXXXXXEEISAEDFKQEGRD 2343
            MR+  S+RF LNPSEK+TL +MAR+    +                EEISAEDF+Q+GR 
Sbjct: 1    MRMPRSSRFVLNPSEKKTLARMARNGSHVNGVDNGEISDGDSSASLEEISAEDFRQDGRG 60

Query: 2342 GRSRMW----MGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXX 2175
             RSR+W    MGY +++ + P LYSFAWAQAVQNKPLGL +                   
Sbjct: 61   SRSRVWDDGMMGYSVARTFGPTLYSFAWAQAVQNKPLGLEMKRANDADGKRGKEGGFD-- 118

Query: 2174 XXXXXDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXESVVVDETTDLSSDKPQNXXXXXXX 1995
                   +                              V +E  +LSSDK ++       
Sbjct: 119  ------AVFVDSSEDSVGEMEKEEGELEEGEIDLDYEPVAEEMINLSSDKIEDDSKLPAA 172

Query: 1994 XXXXSQD-----IGDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGI 1830
                ++D     + D DRRV  ILEEL+AIT EEAE S +  CSRL KSF  LK +F   
Sbjct: 173  DTKENEDKEEADMEDLDRRVAEILEELEAITSEEAEASLEAACSRLLKSFAGLKTLFA-- 230

Query: 1829 ESSDTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQV 1650
            ES   +L ALVQ AFMGIQT+ S   S  + K +QN  LLLRLLIHIKNQYS+L T +QV
Sbjct: 231  ESHVPILDALVQHAFMGIQTLNSVFCSGNVKKTKQNMDLLLRLLIHIKNQYSLLLTQDQV 290

Query: 1649 KEIDTLVNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPEIS--SGGSKPYLGPKAVELY 1476
             EID++   L+  D  KEKV   GS  N ++++   + P  S  +   KP LG +  +L 
Sbjct: 291  TEIDSMAQLLLSSDVSKEKVLQSGSSANSSDSSHQPERPSASFIASAQKPDLGLRETDLS 350

Query: 1475 ----------TLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPKXXXX 1326
                        +LP+   +R+RVE+SPLLDLHADY+E SLPSPTR N P   I K    
Sbjct: 351  GSHSRGFFLPKFQLPL---TRSRVEFSPLLDLHADYEEGSLPSPTRDNAPPLPIMKPVGL 407

Query: 1325 XXXXXXXSHTI---EAEDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEGV 1155
                          E +D  +  Y+ DA+KAVSSYQ K+G            PTPSEE  
Sbjct: 408  ATSVLSHPTVFKKEEKDDTPLHSYMNDAVKAVSSYQQKYGRTSILPSNELPSPTPSEECS 467

Query: 1154 KEDDSHDEVCSSSVAANVRTVNIAASPVVMSSCSDQLNSV--KLVGQVSTESKPVLKPAL 981
             ED+  DE+ SS V  +V++   ++      S S  + +   K+ GQ+++    V K   
Sbjct: 468  NEDEKLDEISSSLVVGSVKSAEGSSLLKTSGSGSSFVPTAPNKMAGQLNSLQTQVAK--A 525

Query: 980  KSRDPRLKFMKSEVRGSSEGNRGALDNVIAIGTPNVRKHKTFDDPFAGDHIMKRQRNGFT 801
            KSRDPRL+ +   +  SS+ +      +   G  N +KHK  D     DH +KRQR    
Sbjct: 526  KSRDPRLRVINPNIGVSSDQDLSRTGRI--EGITNDKKHKAADAIRQEDHPLKRQRYSSI 583

Query: 800  SSRDMQITSGGGGPLEDSSITSESSDK-NQANEKFQVDMRKPGTSIVGSDRNLVSKSNFS 624
            +  DM        P+  S +  E  +K   A      D R PGT+    D N  +  N +
Sbjct: 584  TLTDM--------PMNVSRVVPEMINKPGNATASAAADSR-PGTNGNSIDANPGNDQNPA 634

Query: 623  VLNGXXXXXXXXXXXXXXXXXXLKAVNPTILMQLHQMEQKRIAAENQQKANASLSVMETV 444
            + +                      ++P ILM+L +++Q+ +AAE+QQKA  S      +
Sbjct: 635  ISS--------VPSISLPSLLKEMDISPEILMELLKIKQQSLAAESQQKAGISAGTAVRL 686

Query: 443  PNENGLSGSVSS---LITRPEDAGTNQLGISQIAPQPTSVSTQNDIGRIRMKPRDPRRVL 273
               +GL GS+SS   +  + ++   N     QI+ Q  +   QND GR+RMKPRDPRR+L
Sbjct: 687  NGSSGLPGSISSVNDVALKTKEVEQNSSSKPQISAQSATSKPQNDAGRLRMKPRDPRRIL 746

Query: 272  HNNMLQKHDAVLLEQNPIDGATSRPQSSMECSSTRELAVQAHPKVIPTQFSSPPKVTQQL 93
            H+N++QK D  + EQN I    S  Q++ +  + R++  Q          S  P   QQ 
Sbjct: 747  HDNVIQKPDGSVPEQNKIGPMPSSSQTNKDKITDRDMGEQ----------SQIPNYNQQF 796

Query: 92   TKNL 81
            TKNL
Sbjct: 797  TKNL 800


>ref|XP_020580757.1| RNA polymerase II C-terminal domain phosphatase-like 3 isoform X2
            [Phalaenopsis equestris]
          Length = 1215

 Score =  405 bits (1040), Expect = e-120
 Identities = 303/844 (35%), Positives = 416/844 (49%), Gaps = 30/844 (3%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRGSRXXXXXXXXXXXXXXXEEISAEDFKQEGRD 2343
            MR+  S+RF LNPSEK+TL +MAR+    +                EEISAEDF+Q+GR 
Sbjct: 1    MRMPRSSRFVLNPSEKKTLARMARNGSHVNGVDNGEISDGDSSASLEEISAEDFRQDGRG 60

Query: 2342 GRSRMW----MGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXX 2175
             RSR+W    MGY +++ + P LYSFAWAQAVQNKPLGL +                   
Sbjct: 61   SRSRVWDDGMMGYSVARTFGPTLYSFAWAQAVQNKPLGLEMKRANDADGKRGKEGGFD-- 118

Query: 2174 XXXXXDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXESVVVDETTDLSSDKPQNXXXXXXX 1995
                   +                              V +E  +LSSDK ++       
Sbjct: 119  ------AVFVDSSEDSVGEMEKEEGELEEGEIDLDYEPVAEEMINLSSDKIEDDSKLPAA 172

Query: 1994 XXXXSQD-----IGDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGI 1830
                ++D     + D DRRV  ILEEL+AIT EEAE S +  CSRL KSF  LK +F   
Sbjct: 173  DTKENEDKEEADMEDLDRRVAEILEELEAITSEEAEASLEAACSRLLKSFAGLKTLFA-- 230

Query: 1829 ESSDTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQV 1650
            ES   +L ALVQ AFMGIQT+ S   S  + K +QN  LLLRLLIHIKNQYS+L T +QV
Sbjct: 231  ESHVPILDALVQHAFMGIQTLNSVFCSGNVKKTKQNMDLLLRLLIHIKNQYSLLLTQDQV 290

Query: 1649 KEIDTLVNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPEIS--SGGSKPYLGPKAVELY 1476
             EID++   L+  D  KEKV   GS  N ++++   + P  S  +   KP LG +  +L 
Sbjct: 291  TEIDSMAQLLLSSDVSKEKVLQSGSSANSSDSSHQPERPSASFIASAQKPDLGLRETDLS 350

Query: 1475 ----------TLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPKXXXX 1326
                        +LP+   +R+RVE+SPLLDLHADY+E SLPSPTR N P   I K    
Sbjct: 351  GSHSRGFFLPKFQLPL---TRSRVEFSPLLDLHADYEEGSLPSPTRDNAPPLPIMKPVGL 407

Query: 1325 XXXXXXXSHTI---EAEDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEGV 1155
                          E +D  +  Y+ DA+KAVSSYQ K+G            PTPSEE  
Sbjct: 408  ATSVLSHPTVFKKEEKDDTPLHSYMNDAVKAVSSYQQKYGRTSILPSNELPSPTPSEECS 467

Query: 1154 KEDDSHDEVCSSSVAANVRTVNIAASPVVMSSCSDQLNSV--KLVGQVSTESKPVLKPAL 981
             ED+  DE+ SS V  +V++   ++      S S  + +   K+ GQ+++    V K   
Sbjct: 468  NEDEKLDEISSSLVVGSVKSAEGSSLLKTSGSGSSFVPTAPNKMAGQLNSLQTQVAK--A 525

Query: 980  KSRDPRLKFMKSEVRGSSEGNRGALDNVIAIGTPNVRKHKTFDDPFAGDHIMKRQRNGFT 801
            KSRDPRL+ +   +  SS+ +      +   G  N +KHK  D     DH +KRQR    
Sbjct: 526  KSRDPRLRVINPNIGVSSDQDLSRTGRI--EGITNDKKHKAADAIRQEDHPLKRQRYSSI 583

Query: 800  SSRDMQITSGGGGPLEDSSITSESSDK-NQANEKFQVDMRKPGTSIVGSDRNLVSKSNFS 624
            +  DM        P+  S +  E  +K   A      D R PGT+    D N  +  N +
Sbjct: 584  TLTDM--------PMNVSRVVPEMINKPGNATASAAADSR-PGTNGNSIDANPGNDQNPA 634

Query: 623  VLNGXXXXXXXXXXXXXXXXXXLKAVNPTILMQLHQMEQKRIAAENQQKANASLSVMETV 444
            + +                      ++P ILM+L +++Q+ +AAE+QQKA  S      +
Sbjct: 635  ISS--------VPSISLPSLLKEMDISPEILMELLKIKQQSLAAESQQKAGISAGTAVRL 686

Query: 443  PNENGLSGSVSS---LITRPEDAGTNQLGISQIAPQPTSVSTQNDIGRIRMKPRDPRRVL 273
               +GL GS+SS   +  + ++   N     QI+ Q    +T ND GR+RMKPRDPRR+L
Sbjct: 687  NGSSGLPGSISSVNDVALKTKEVEQNSSSKPQISAQS---ATSNDAGRLRMKPRDPRRIL 743

Query: 272  HNNMLQKHDAVLLEQNPIDGATSRPQSSMECSSTRELAVQAHPKVIPTQFSSPPKVTQQL 93
            H+N++QK D  + EQN I    S  Q++ +  + R++  Q          S  P   QQ 
Sbjct: 744  HDNVIQKPDGSVPEQNKIGPMPSSSQTNKDKITDRDMGEQ----------SQIPNYNQQF 793

Query: 92   TKNL 81
            TKNL
Sbjct: 794  TKNL 797


>ref|XP_020111428.1| RNA polymerase II C-terminal domain phosphatase-like 3 isoform X2
            [Ananas comosus]
          Length = 1121

 Score =  399 bits (1024), Expect = e-118
 Identities = 306/840 (36%), Positives = 401/840 (47%), Gaps = 25/840 (2%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRGSRXXXXXXXXXXXXXXXEEISAEDFKQEGRD 2343
            MRV G+ R++LNPSE+ETL +MA D  R                   E+S  D       
Sbjct: 1    MRVAGANRYFLNPSEEETLAKMATDHPRSE---VASAAGTAAAEEGFEVSHGD---SAEG 54

Query: 2342 GRSRMWMGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXXXXXX 2163
             RSR+WMGY M +NYA +LY+FAWAQAVQNKPLGL+L P+                    
Sbjct: 55   PRSRVWMGYTMPRNYAAHLYNFAWAQAVQNKPLGLDLNPV----------GSEADPDSEG 104

Query: 2162 XDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXESVVVDETTDLSSDKPQNXXXXXXXXXXX 1983
             D++I                               ++  +L SDKP+            
Sbjct: 105  LDMVIDVSSEESGGGMEKEEGELEEGEIELGSEPAAEQPIELDSDKPEEKKEPEEKESDG 164

Query: 1982 SQDI--GDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGIESSDT-V 1812
             +     DFD RV LILEELD IT+EEAE SF+G CSRL +SFE LKP+F+ +E     V
Sbjct: 165  IEHEKPADFDSRVSLILEELDGITMEEAEASFEGACSRLHRSFESLKPLFSEMEEGPLPV 224

Query: 1811 LHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQVKEIDTL 1632
            + +LVQ AF GIQ + S L S  + KKE+NK L LRLLI IKNQYS L TPEQ+ E+D +
Sbjct: 225  MDSLVQWAFTGIQAVNSVLSSSHLPKKEENKNLFLRLLIRIKNQYSTLLTPEQINELDKI 284

Query: 1631 VNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPEISSGGSKPYLGPKAVELYTL------ 1470
            V SL FE+    K      G   +          +SSG  KP    + V   T       
Sbjct: 285  VKSLAFEEGKTVKELSTADGGIAD---------ALSSGAEKPTSAQRGVNSLTANGPSVS 335

Query: 1469 --ELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTR--QNLPRFSIPKXXXXXXXXXXXS 1302
               L +PT SRN+   SPLLDLHADYDE SLPSPTR   N P F +PK           +
Sbjct: 336  LPRLELPTMSRNKA-ISPLLDLHADYDESSLPSPTRANSNSPPFPMPKPVGVGSNSGLST 394

Query: 1301 HTIEA----EDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEG---VKEDD 1143
             +       ED A+  YVTDA+KAVS+YQ K+G            PTPS++     ++D 
Sbjct: 395  KSTSRPKMDEDTALHSYVTDAVKAVSTYQQKYGKNSFLTTNRLPSPTPSDDSNNDNEQDT 454

Query: 1142 SHDEVCSSSVAANVRTVNIAASPVVMSSCSDQLNSVKLVGQVSTES---KPVLKPALKSR 972
             + EV SSS A   R VN   +            S+K VGQV          LK A KSR
Sbjct: 455  CNGEVSSSSAAPKARQVNTTRN-----------GSIKPVGQVGPGGPGPNSGLKAAAKSR 503

Query: 971  DPRLKFMKSEVRGSSEGNRGALDNVIAIGTPNVRKHKTFDDPFAGDHIMKRQRNGFTSSR 792
            DPRL+FMKSE      G              N RK+K  D+    +H  KR RNG     
Sbjct: 504  DPRLRFMKSEAEDGISGM-----------VMNSRKNKAVDESLPEEHSSKRLRNGV---- 548

Query: 791  DMQITSGGGGPLEDSSITSESSDKNQANEKFQVDMRKPGTSIVGSDRNL-VSKSNFSVLN 615
                                 +D+ Q  E+ + D  + G   V  ++ L  + +NF   N
Sbjct: 549  ---------------------NDRVQLREQSKFDNGRGGNGGVDFNKPLNDNNTNFGGPN 587

Query: 614  GXXXXXXXXXXXXXXXXXXLKAVNPTILMQLHQMEQKRIAAENQQKANASLSVMETVPNE 435
            G                    AVNP +L+Q  Q EQKR++AE QQKA AS        ++
Sbjct: 588  GGVTPDVASSSVPSRSQNI--AVNPKMLVQFLQKEQKRLSAEAQQKAAASAFDKR---SD 642

Query: 434  NGLSGSVSSLITRPEDAGTNQLGISQIAPQPTSVSTQNDIGRIRMKPRDPRRVLHNNMLQ 255
             G+S +  ++++          G  Q+  Q + +++QND GR+R+KPRDPRR+LH++  Q
Sbjct: 643  TGISVTPGTVLSG---------GGPQVTSQTSGMNSQNDPGRVRLKPRDPRRILHDSTTQ 693

Query: 254  KHDAVLLEQNPIDGA-TSRPQSSMECSSTRELAVQAHPKVIPTQFSSPPKVTQQLTKNLA 78
              +A   EQ  ++ A +S PQSS +    RE    A P   P Q +  P  T QLTKNL+
Sbjct: 694  NSNASGPEQAKMNEAVSSGPQSSKDHLVVREHGDSAQPSGAPPQSAPLPISTPQLTKNLS 753


>ref|XP_020111427.1| RNA polymerase II C-terminal domain phosphatase-like 3 isoform X1
            [Ananas comosus]
 gb|OAY72450.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Ananas
            comosus]
          Length = 1142

 Score =  399 bits (1024), Expect = e-118
 Identities = 306/840 (36%), Positives = 401/840 (47%), Gaps = 25/840 (2%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRGSRXXXXXXXXXXXXXXXEEISAEDFKQEGRD 2343
            MRV G+ R++LNPSE+ETL +MA D  R                   E+S  D       
Sbjct: 1    MRVAGANRYFLNPSEEETLAKMATDHPRSE---VASAAGTAAAEEGFEVSHGD---SAEG 54

Query: 2342 GRSRMWMGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXXXXXX 2163
             RSR+WMGY M +NYA +LY+FAWAQAVQNKPLGL+L P+                    
Sbjct: 55   PRSRVWMGYTMPRNYAAHLYNFAWAQAVQNKPLGLDLNPV----------GSEADPDSEG 104

Query: 2162 XDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXESVVVDETTDLSSDKPQNXXXXXXXXXXX 1983
             D++I                               ++  +L SDKP+            
Sbjct: 105  LDMVIDVSSEESGGGMEKEEGELEEGEIELGSEPAAEQPIELDSDKPEEKKEPEEKESDG 164

Query: 1982 SQDI--GDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGIESSDT-V 1812
             +     DFD RV LILEELD IT+EEAE SF+G CSRL +SFE LKP+F+ +E     V
Sbjct: 165  IEHEKPADFDSRVSLILEELDGITMEEAEASFEGACSRLHRSFESLKPLFSEMEEGPLPV 224

Query: 1811 LHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQVKEIDTL 1632
            + +LVQ AF GIQ + S L S  + KKE+NK L LRLLI IKNQYS L TPEQ+ E+D +
Sbjct: 225  MDSLVQWAFTGIQAVNSVLSSSHLPKKEENKNLFLRLLIRIKNQYSTLLTPEQINELDKI 284

Query: 1631 VNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPEISSGGSKPYLGPKAVELYTL------ 1470
            V SL FE+    K      G   +          +SSG  KP    + V   T       
Sbjct: 285  VKSLAFEEGKTVKELSTADGGIAD---------ALSSGAEKPTSAQRGVNSLTANGPSVS 335

Query: 1469 --ELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTR--QNLPRFSIPKXXXXXXXXXXXS 1302
               L +PT SRN+   SPLLDLHADYDE SLPSPTR   N P F +PK           +
Sbjct: 336  LPRLELPTMSRNKA-ISPLLDLHADYDESSLPSPTRANSNSPPFPMPKPVGVGSNSGLST 394

Query: 1301 HTIEA----EDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEG---VKEDD 1143
             +       ED A+  YVTDA+KAVS+YQ K+G            PTPS++     ++D 
Sbjct: 395  KSTSRPKMDEDTALHSYVTDAVKAVSTYQQKYGKNSFLTTNRLPSPTPSDDSNNDNEQDT 454

Query: 1142 SHDEVCSSSVAANVRTVNIAASPVVMSSCSDQLNSVKLVGQVSTES---KPVLKPALKSR 972
             + EV SSS A   R VN   +            S+K VGQV          LK A KSR
Sbjct: 455  CNGEVSSSSAAPKARQVNTTRN-----------GSIKPVGQVGPGGPGPNSGLKAAAKSR 503

Query: 971  DPRLKFMKSEVRGSSEGNRGALDNVIAIGTPNVRKHKTFDDPFAGDHIMKRQRNGFTSSR 792
            DPRL+FMKSE      G              N RK+K  D+    +H  KR RNG     
Sbjct: 504  DPRLRFMKSEAEDGISGM-----------VMNSRKNKAVDESLPEEHSSKRLRNGV---- 548

Query: 791  DMQITSGGGGPLEDSSITSESSDKNQANEKFQVDMRKPGTSIVGSDRNL-VSKSNFSVLN 615
                                 +D+ Q  E+ + D  + G   V  ++ L  + +NF   N
Sbjct: 549  ---------------------NDRVQLREQSKFDNGRGGNGGVDFNKPLNDNNTNFGGPN 587

Query: 614  GXXXXXXXXXXXXXXXXXXLKAVNPTILMQLHQMEQKRIAAENQQKANASLSVMETVPNE 435
            G                    AVNP +L+Q  Q EQKR++AE QQKA AS        ++
Sbjct: 588  GGVTPDVASSSVPSRSQNI--AVNPKMLVQFLQKEQKRLSAEAQQKAAASAFDKR---SD 642

Query: 434  NGLSGSVSSLITRPEDAGTNQLGISQIAPQPTSVSTQNDIGRIRMKPRDPRRVLHNNMLQ 255
             G+S +  ++++          G  Q+  Q + +++QND GR+R+KPRDPRR+LH++  Q
Sbjct: 643  TGISVTPGTVLSG---------GGPQVTSQTSGMNSQNDPGRVRLKPRDPRRILHDSTTQ 693

Query: 254  KHDAVLLEQNPIDGA-TSRPQSSMECSSTRELAVQAHPKVIPTQFSSPPKVTQQLTKNLA 78
              +A   EQ  ++ A +S PQSS +    RE    A P   P Q +  P  T QLTKNL+
Sbjct: 694  NSNASGPEQAKMNEAVSSGPQSSKDHLVVREHGDSAQPSGAPPQSAPLPISTPQLTKNLS 753


>ref|XP_020246902.1| RNA polymerase II C-terminal domain phosphatase-like 3 isoform X1
            [Asparagus officinalis]
 ref|XP_020246903.1| RNA polymerase II C-terminal domain phosphatase-like 3 isoform X2
            [Asparagus officinalis]
          Length = 1127

 Score =  367 bits (941), Expect = e-107
 Identities = 273/687 (39%), Positives = 368/687 (53%), Gaps = 26/687 (3%)
 Frame = -1

Query: 2063 VVVDETTDLSSDKPQNXXXXXXXXXXXSQDIGDFDRRVGLILEELDAITVEEAETSFDGV 1884
            V V+++T++ S+  +N            ++I +FD + G+ILEEL+ ITVEEAE+SF  V
Sbjct: 114  VNVEDSTNVESNGEKNEKDDEV------EEIDEFDNQFGMILEELETITVEEAESSFQEV 167

Query: 1883 CSRLRKSFEDLKPMFTGIESSDTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLR 1704
            CSRL+KSF  LK MF  ++    VL  +VQQAF+GIQTIYSA +S  + K +QNK+LLLR
Sbjct: 168  CSRLQKSFASLKQMF--LQGHGPVLDVIVQQAFVGIQTIYSAFNSGHLKKLDQNKELLLR 225

Query: 1703 LLIHIKNQYSVLFTPEQVKEIDTLVNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPEIS 1524
            LLIHIKNQYSV  TPEQVKEID  V++L  E      +  G + +  N +  + + PEI 
Sbjct: 226  LLIHIKNQYSVFLTPEQVKEIDVRVHTLASE----AVLSTGKTTSFPNGSANVGERPEIL 281

Query: 1523 SGGSKPYLGPKAVE-LYTLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFS 1347
            +   K     + ++   +  L  P ASR+RV++SPLL+LH DYDEDSLPSPTR N P   
Sbjct: 282  A--EKRKADQRGIDKASSANLEQPNASRSRVDFSPLLNLHGDYDEDSLPSPTRDNAPPLP 339

Query: 1346 IPKXXXXXXXXXXXSH-----TIEAEDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXX 1182
            + K           SH      ++ E+A + PYVTDALKAVSSYQ K+G           
Sbjct: 340  VLKPIGFGSGTAFNSHLVAPRNVQTENATLHPYVTDALKAVSSYQEKYGKNSILESTRLP 399

Query: 1181 XPTPSEEG-VKEDDSHDEVCSSSVAANVRTV--NIAA---SPV----------VMSSCSD 1050
             PTPSE+G    DD + EV SSS + N RTV  + AA   +PV          V SS   
Sbjct: 400  SPTPSEDGNGGNDDINGEVSSSSGSHNARTVLPSTAANGMAPVNSSDGFQMQPVYSSAGP 459

Query: 1049 QLNSVKLVGQVSTESKPVLKPALKSRDPRLKFMKSEVRGSSEGNRGALDNVIAIGTPNVR 870
            Q+  V+ +GQV +E+ P +K + KSRDPRL+FMKSE     +       N  A G  N  
Sbjct: 460  QMAQVRTIGQVGSEANPAVKASAKSRDPRLRFMKSETSVVPK-------NGFAAGPVNSL 512

Query: 869  KHKTFDDPFAGDHIMKRQRNGFTSSRDMQITSGGGGPLEDSSITSESSDKNQA----NEK 702
            KHK+ D+    +H +KRQR    SSRD+++T    G  +D ++              N K
Sbjct: 513  KHKSDDELVLDEHSLKRQRKDSMSSRDVKVTGSQSGATKDRNLVGTEVGYEMGLDADNNK 572

Query: 701  FQVDMRKPGTSIVGSDRNLVSKSNFSVLNGXXXXXXXXXXXXXXXXXXLKAVNPTILMQL 522
              V    P TSI  +   +VS    S+L G                    A NP +L+QL
Sbjct: 573  LTVS-SVPSTSI-STTGPIVSLP--SLLKGI-------------------AANPQMLVQL 609

Query: 521  HQMEQKRIAAENQQKANASLSVMETVPNENGLSGSVSSLITRPEDAGTNQLGISQIAPQP 342
             +MEQ++IAA   Q+     +V       NGLS + SS        G N    SQ+ PQ 
Sbjct: 610  LRMEQQKIAAGQAQEKPDGQAV-------NGLSSATSS----SSGIGQNPSVKSQMPPQ- 657

Query: 341  TSVSTQNDIGRIRMKPRDPRRVLHNNMLQKHDAVLLEQNPIDGATSRPQSSMECSSTREL 162
             + ST N++ +IRMKPRDPRRVLH+NM Q+ +           ATS   S  +    R+ 
Sbjct: 658  -TKSTNNNMAKIRMKPRDPRRVLHSNMAQRTE-------NSGSATSNVHSIKDQLLHRKQ 709

Query: 161  AVQAHPKVIPTQFSSPPKVTQQLTKNL 81
              QA    +P Q +S   ++QQ TKNL
Sbjct: 710  GDQAQKLAVPLQSASLTDISQQFTKNL 736



 Score = 62.4 bits (150), Expect = 5e-06
 Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 7/57 (12%)
 Frame = -1

Query: 2381 EISAEDFKQEGR---DGRSRMW----MGYPMSKNYAPNLYSFAWAQAVQNKPLGLNL 2232
            EI+A+D K++       RSR+W    MG+P+ +NY  +LYSFAWAQAVQNKPLGL++
Sbjct: 21   EITADDLKKKDARAPSSRSRVWASDLMGFPVHRNYNQDLYSFAWAQAVQNKPLGLDV 77


>gb|OAY70586.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Ananas
            comosus]
          Length = 570

 Score =  326 bits (836), Expect = 4e-97
 Identities = 233/595 (39%), Positives = 291/595 (48%), Gaps = 23/595 (3%)
 Frame = -1

Query: 2522 MRVVGSTRFYLNPSEKETLDQMARDRHRGSRXXXXXXXXXXXXXXXEEISAEDFKQEGRD 2343
            MRV G+ R++LNPSE+ETL +MA D  R                   E+S  D       
Sbjct: 1    MRVAGANRYFLNPSEEETLAKMATDHPRSE--VTSAAAAAAAAEEGFEVSHGD---SAEG 55

Query: 2342 GRSRMWMGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMPLTXXXXXXXXXXXXXXXXXXX 2163
             RSR+WMGY M +NYA +LY+FAWAQAVQNKPLGL+L P+                    
Sbjct: 56   PRSRVWMGYTMPRNYAAHLYNFAWAQAVQNKPLGLDLNPV----------GSEADPDSEG 105

Query: 2162 XDVIIXXXXXXXXXXXXXXXXXXXXXXXXXXESVVVDETTDLSSDKPQNXXXXXXXXXXX 1983
             D++I                               ++  +L SDKP+            
Sbjct: 106  LDMVIDVSSEESGGGMEKEEGELEEGEIELGSEPAAEQPIELDSDKPEEKKEPEEKESDG 165

Query: 1982 SQDI--GDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGIESSDT-V 1812
             +     DFD RV LILEELD IT+EEAE SF+G CSRL KSFE LKP+F+ +E     V
Sbjct: 166  IEHERPADFDSRVSLILEELDGITMEEAEASFEGACSRLHKSFESLKPLFSEMEEGPLPV 225

Query: 1811 LHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQVKEIDTL 1632
            + +LVQ AF GIQT+ S L S  + KKE+NK L LRLLI +KNQYS L TPEQ+ E+D +
Sbjct: 226  MDSLVQWAFTGIQTVNSVLSSSHLPKKEENKNLFLRLLIRLKNQYSTLLTPEQINELDKI 285

Query: 1631 VNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPEISSGGSKPYLGPKAVELYTLE----- 1467
            V SL FE+    K      G   +          +SSG  KP    + V   T +     
Sbjct: 286  VKSLAFEEGKTVKELSTADGGIAD---------ALSSGAEKPTSAQRGVNSLTADGPSVS 336

Query: 1466 ---LPIPTASRNRVEYSPLLDLHADYDEDSLPSPTR--QNLPRFSIPKXXXXXXXXXXXS 1302
               L +PT SRN+   SPLLDLHADYDE SLPSPTR   N P F +PK           +
Sbjct: 337  LPRLELPTMSRNKA-ISPLLDLHADYDESSLPSPTRANSNSPPFPMPKPVGVGSNSGLST 395

Query: 1301 HTIEA----EDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEG---VKEDD 1143
             +       ED A+  YVTDA+KAVS+YQ K+G            PTPS++     ++D 
Sbjct: 396  KSTSRPKMDEDTALHSYVTDAVKAVSTYQQKYGKNSFLTTNRLPSPTPSDDSNNDNEQDT 455

Query: 1142 SHDEVCSSSVAANVRTVNIAASPVVMSSCSDQLNSVKLVGQVSTES---KPVLKPALKSR 972
             + EV SSS A   R VN   +            S+K VGQV          LK A KSR
Sbjct: 456  CNGEVSSSSAALKARQVNTTRN-----------GSIKPVGQVGPGGPGPNSGLKAAAKSR 504

Query: 971  DPRLKFMKSEVRGSSEGNRGALDNVIAIGTPNVRKHKTFDDPFAGDHIMKRQRNG 807
            DPRL+FMKSE      G              N RK+K  D+    +H  KR RNG
Sbjct: 505  DPRLRFMKSEAEDGISGM-----------VMNSRKNKAVDESLPEEHSSKRLRNG 548


>ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 3 [Oryza brachyantha]
          Length = 1267

 Score =  325 bits (832), Expect = 8e-91
 Identities = 246/683 (36%), Positives = 347/683 (50%), Gaps = 55/683 (8%)
 Frame = -1

Query: 1967 DFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGIESSDTVLHALVQQA 1788
            DFD+RVG ILEEL+ I++EEAE SF+G C+RLR SFE+LKP+F    S   +L  LVQQA
Sbjct: 186  DFDQRVGSILEELETISIEEAEKSFEGACTRLRTSFENLKPLFPETGSPMPMLDTLVQQA 245

Query: 1787 FMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQVKEIDTLVNSLVFED 1608
            F+ I TI +  +S  M K+EQ K +LL+LL HIKN+YS + TP+Q  E+D+ V  LVFED
Sbjct: 246  FIAIDTITTVANSYDMPKREQTKNMLLKLLFHIKNRYSYMLTPDQRNELDSRVRQLVFED 305

Query: 1607 -QFKEKVQHGGSGNNMNN-----NTVLSKDPEISSGGSKPYLGPKAVELYTLELPIPTAS 1446
             +      +   G N +N       VLS+     SG    + G       T  L +   S
Sbjct: 306  GKDTANCPNATCGTNTSNVAATSGQVLSERLPFESGAGNTFSG-------TSMLKVEIPS 358

Query: 1445 RNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPK-----XXXXXXXXXXXSHTIEAED 1281
            +NR+  SPLLDLHADYDE+SLPSPTR + P F +PK                   +E   
Sbjct: 359  KNRM-ISPLLDLHADYDENSLPSPTRDSTPPFPVPKPIGFGTFLMAPDRPSIMERVEPVK 417

Query: 1280 AAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEGVKEDDSHDEV---CSSSVA 1110
             +  P + DALKAVSSYQ K+G            PTPS +G K  D   ++    SS  A
Sbjct: 418  NSSYPSLNDALKAVSSYQQKYGQKSTFASDDLPSPTPSGDGDKSGDKGGDIFGEVSSFPA 477

Query: 1109 ANVRTVNIA-----ASPVVMSSCSDQL-----NSVKLVGQVSTESKPVLKPALKSRDPRL 960
            +N   + +      + P  +SS SD          K +    + S  +LK   KSRDPRL
Sbjct: 478  SNKIVLPVVNQMPPSRPSTVSSSSDSFAGGPPGYAKQIENPVSGSNHMLKATAKSRDPRL 537

Query: 959  KFMKSEVRGSSEGNR--------GALDNVIAIGTP-NVRKHKTFDDPFAGDHIMKRQRNG 807
            +F+  +    ++ NR         + D  + +G P N RKHKT D+P   ++++KR R G
Sbjct: 538  RFLNRDAGVVADANRRLNFAEPNPSKDRTMGVGVPINSRKHKTVDEPLVDENMLKRSRGG 597

Query: 806  FTSSRDMQITSGGGGPLEDS-SITSESSDKNQANEKFQVDMRKPGTSIVGSDRNLVSKSN 630
              + RD+   +G GG  +D  +++S SSD  Q N+  ++     G+  V +D  LVS +N
Sbjct: 598  NGNPRDVLTPAGRGGWAKDGVNVSSYSSDGFQPNQNTRLGNSTTGSHNVRTDSTLVSNTN 657

Query: 629  FSVLNGXXXXXXXXXXXXXXXXXXLK--------------AVNPTILMQLHQMEQKRIAA 492
             ++ N                                   AVNPT+LMQ  QMEQ++++A
Sbjct: 658  -NMTNSSGINTGVVQAPQTNSSPQTSSAPSVSLPAMLKDIAVNPTMLMQWIQMEQQKMSA 716

Query: 491  -ENQQKANASLSVMETVPNENGLSGSVSSLITRPEDAGTNQLGISQIAPQPTSVSTQNDI 315
             E  QK  AS+ +     NE        S  ++  +A       SQ+  Q  +V +QND 
Sbjct: 717  TEPLQKVTASVGM---TSNETAGMVLPLSCASKTTEAAPVPSVRSQVPMQTAAVHSQNDA 773

Query: 314  GRIRMKPRDPRRVLHNNMLQKHDAVL---LEQNPIDGATSRPQ---SSMECSSTRELAVQ 153
            G IRMKPRDPRR+LH+N+ QK+D V    +EQ  I+G T+ P    S     +  + A Q
Sbjct: 774  GVIRMKPRDPRRILHSNIAQKNDTVPPVGVEQAKING-TALPDSQGSKDHLLNHEQQAEQ 832

Query: 152  AHPKVIPTQFSSPPKVTQQLTKN 84
                 +P+Q  +P    +Q+T N
Sbjct: 833  LQTSALPSQPVTPS--ARQVTMN 853



 Score = 63.9 bits (154), Expect = 2e-06
 Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 18/64 (28%)
 Frame = -1

Query: 2381 EISAEDFKQEGRDG------------------RSRMWMGYPMSKNYAPNLYSFAWAQAVQ 2256
            EISA+DFK+E   G                  RSR+WMGY M ++YAP  +SFAWAQAVQ
Sbjct: 46   EISADDFKKESSGGGGGAGAGAGTGGGVAAAQRSRVWMGYSMPRSYAPAFHSFAWAQAVQ 105

Query: 2255 NKPL 2244
            NKPL
Sbjct: 106  NKPL 109


>ref|XP_020254496.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Asparagus
            officinalis]
          Length = 1111

 Score =  315 bits (807), Expect = 4e-88
 Identities = 245/668 (36%), Positives = 327/668 (48%), Gaps = 45/668 (6%)
 Frame = -1

Query: 1979 QDIGDFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGIESSDTVLHAL 1800
            ++IG+FD++ G ILEEL+ IT+EEAE+SF+ VCSRL+K F  LK M++  E    VL  L
Sbjct: 143  EEIGEFDKQFGDILEELETITIEEAESSFEEVCSRLQKCFASLKQMYS--EGHGPVLDVL 200

Query: 1799 VQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQVKEIDTLVNSL 1620
             QQAFMGIQT+YSA +S  + K  QN++ LLR L+HIKNQYS   TPEQVKE+D  +  L
Sbjct: 201  SQQAFMGIQTVYSAFNSGNLKKDRQNEERLLRFLVHIKNQYSACLTPEQVKELDVKLQEL 260

Query: 1619 VFEDQFKEKVQHGGSGNNMNNNTVLSKDPEISSGG--------SKPYLGPKAVELYTLEL 1464
              E           +G       ++++ P  ++ G         KP LG        LE+
Sbjct: 261  ASESV--------RTGKTTERPAIVAEKPMSNARGGQVLGNNIEKPTLG-------KLEV 305

Query: 1463 PIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPKXXXXXXXXXXXSHTI--- 1293
            P P   R RV++SPLL+LHADYDEDSLPSPTR N P   + K           +  I   
Sbjct: 306  PTP---RARVDFSPLLNLHADYDEDSLPSPTRNNAPPLPMMKPPGFGKGEIPFAQPIAPK 362

Query: 1292 --EAEDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEG-VKEDDSHDEVCS 1122
              +AE+     YVTDA KAVSSYQ K+G            PTPSE+G   +DD   EV S
Sbjct: 363  NLQAENGTSHHYVTDAFKAVSSYQQKYGKNSVVTSTRLPSPTPSEDGNGGDDDVISEVSS 422

Query: 1121 SSVAANVRTVNIAASP---VVMSSCSDQLNSVKLVGQVS--------------------- 1014
              VA NV       +P    V SS   Q++     G +                      
Sbjct: 423  LFVAGNVGASGPCTAPPMTSVNSSAGYQVSRAYTSGGLQMPPVNSSGGFQMAPAYCSAGP 482

Query: 1013 TESKPVLKPALKSRDPRLKFMKSEVRGSSEGNRGALDNVIAIGTPNVRKHKTFDDPFAGD 834
             E  P++K ++KSRDPRL+FM SE+ G+ +          A G  N RKHK  ++P   +
Sbjct: 483  LEPNPIVKASVKSRDPRLRFMNSEIDGAPQ------SGFTAAGPLNSRKHKVVEEPLPVE 536

Query: 833  HIMKRQRNGFTSSRDMQITSGGGGPLEDSSITSESSDKNQANEKFQVDMRKPGTSIVGSD 654
              +KRQR          I +  G            +  +Q N   Q++ R+     VGS+
Sbjct: 537  DNLKRQR---------MIAAHNG------------TVASQQNSGVQLNNRE-----VGSE 570

Query: 653  RNLVSKSNFSVLNG---XXXXXXXXXXXXXXXXXXLKAVNPTILMQLHQME-QKRIAAEN 486
            R   S  NF+ L+                        AVNPT+LM L +ME QKR A E 
Sbjct: 571  RRFDSSHNFNGLHSSSVPNLLSGCAPVVSLPSLFKGIAVNPTMLMNLLKMEQQKRAAGEA 630

Query: 485  QQKANASLSVMETVPNENGLSGSVSSLITRPEDAGTNQLGISQIAPQPTSVSTQNDIGRI 306
            QQ A                +G+VSS      DAG N     Q++PQ  +++ QNDIG+I
Sbjct: 631  QQNA----------------AGAVSS----SSDAGKNPTSKPQMSPQTVTMNAQNDIGKI 670

Query: 305  RMKPRDPRRVLHNNMLQKHDAVLLEQNPIDGATSRPQSSMECSSTRELAVQAHPKV---I 135
            RMKPRDPRRVLH+N+       L     +   +S  QSS + S  RE   Q+       I
Sbjct: 671  RMKPRDPRRVLHSNIETSSSEPLKTSGSL---SSDAQSSKDHSPVREQGEQSQTTTSYPI 727

Query: 134  PTQFSSPP 111
            P++ S+ P
Sbjct: 728  PSKISNNP 735



 Score = 61.6 bits (148), Expect = 9e-06
 Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
 Frame = -1

Query: 2378 ISAEDFKQEGRDGRSRMW----MGYPMSKNYAPNLYSFAWAQAVQNKPLGLNLMP 2226
            + A+D KQ+ R   SR+W    M YP+ +NY  +LYSFAWAQAVQNKPLGL++ P
Sbjct: 15   LHADDLKQQCR---SRVWTRDVMRYPVQRNYNQDLYSFAWAQAVQNKPLGLDVRP 66


>dbj|BAT14211.1| Os11g0521900, partial [Oryza sativa Japonica Group]
          Length = 1226

 Score =  306 bits (785), Expect = 1e-84
 Identities = 233/654 (35%), Positives = 318/654 (48%), Gaps = 50/654 (7%)
 Frame = -1

Query: 2051 ETTDLSSDKPQNXXXXXXXXXXXSQDIG------DFDRRVGLILEELDAITVEEAETSFD 1890
            ET DL SD P+            +   G      DFD+RVG ILEEL+ +++EEAE SF+
Sbjct: 121  ETIDLDSDAPEKSESMVAMYGGGAAPAGAEEEEVDFDQRVGSILEELEMVSIEEAEKSFE 180

Query: 1889 GVCSRLRKSFEDLKPMFTGIESSDTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLL 1710
            G C+RLR  FE+LKP+F    S   +L ALVQQAF+GI TI +  +S  M K+EQ K +L
Sbjct: 181  GACTRLRTCFENLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYDMPKREQTKNML 240

Query: 1709 LRLLIHIKNQYSVLFTPEQVKEIDTLVNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPE 1530
            L+LL HIKN+YS + TP+Q  E+D+ V  LVFED      +   +G N  +    +   +
Sbjct: 241  LKLLFHIKNRYSDMLTPDQRDELDSRVRQLVFEDG-----KDNANGPNATSTNAAAPSGQ 295

Query: 1529 ISSGGSKPYLGPKAVELYTLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRF 1350
            + S    P+          +E+P    ++NR+  SPLLDLHADYDE+SLPSPTR + P F
Sbjct: 296  VLS-ERLPFESGAGNSFSKVEIP----AKNRM-VSPLLDLHADYDENSLPSPTRDSKPPF 349

Query: 1349 SIPKXXXXXXXXXXXSHTI---EAEDAAVDPY--VTDALKAVSSYQLKFGXXXXXXXXXX 1185
             +PK                    E A    Y    DALKAV  YQ K G          
Sbjct: 350  DVPKPIGYGALPMAPDRPSVLERVEPAKNSSYQSFNDALKAVCYYQQKHGQKSNFASDDL 409

Query: 1184 XXPTPSEEGVKEDDSHDEV---CSSSVAANVRTVNIA----ASPVVMSSCSDQL-----N 1041
              PTPS +G K  D   +V    SS  A+N   + I     + P  +SS SD        
Sbjct: 410  PSPTPSGDGDKSGDKGGDVFGEVSSFSASNKIALPIVNQMPSRPSTVSSNSDSFAGGPPG 469

Query: 1040 SVKLVGQVSTESKPVLKPALKSRDPRLKFMKSEVRGSSEGNR--------GALDNVIAIG 885
              K +    + S  +LK   KSRDPRLKF+  +  G ++ NR         + D  +  G
Sbjct: 470  YAKQIENSVSGSNHLLKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNPSKDRTMGGG 529

Query: 884  TP-NVRKHKTFDDPFAGDHIMKRQRNGFTSSRDMQITSGGGGPLEDSSITSESSDKNQAN 708
               N RK+K  D+P   ++ +KR R    + RDMQ T  GG   +  +I+S SSD  Q N
Sbjct: 530  VSINSRKNKAVDEPMVDENALKRSRGVIGNLRDMQPTGRGGWAKDGGNISSYSSDGFQPN 589

Query: 707  EKFQVDMRKPGTSIVGSDRNLVSKSNFSVLNGXXXXXXXXXXXXXXXXXXLK-------- 552
            +  ++     G   + +D  L S  N +  N                             
Sbjct: 590  QNTRLGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQTSSAPAVSLPA 649

Query: 551  -----AVNPTILMQLHQMEQKRI-AAENQQKANASLSVMETVPNENGLSGSVSSLITRPE 390
                 AVNPT+LMQ  QMEQ+++ A+E QQK  AS+ +       N   G V  L   P+
Sbjct: 650  MLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGM-----TSNVTPGMVLPLGNAPK 704

Query: 389  DAGTNQLGISQIAP----QPTSVSTQNDIGRIRMKPRDPRRVLHNNMLQKHDAV 240
               T    +  + P    Q   + +QND G IRMKPRDPRR+LH+N++QK+D V
Sbjct: 705  T--TEVAAVPSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTV 756



 Score = 62.0 bits (149), Expect = 7e-06
 Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 11/57 (19%)
 Frame = -1

Query: 2381 EISAEDFKQEGRDG-----------RSRMWMGYPMSKNYAPNLYSFAWAQAVQNKPL 2244
            EISA+DFK+E               RSR+WMGY + ++YAP  +SFAWAQAVQNKPL
Sbjct: 13   EISADDFKKESSAAGGAAAAAAAQQRSRVWMGYNIPRSYAPAFHSFAWAQAVQNKPL 69


>ref|XP_015617180.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Oryza sativa Japonica Group]
 gb|ABA93957.1| NLI interacting factor-like phosphatase family protein, expressed
            [Oryza sativa Japonica Group]
          Length = 1272

 Score =  306 bits (785), Expect = 2e-84
 Identities = 233/654 (35%), Positives = 318/654 (48%), Gaps = 50/654 (7%)
 Frame = -1

Query: 2051 ETTDLSSDKPQNXXXXXXXXXXXSQDIG------DFDRRVGLILEELDAITVEEAETSFD 1890
            ET DL SD P+            +   G      DFD+RVG ILEEL+ +++EEAE SF+
Sbjct: 167  ETIDLDSDAPEKSESMVAMYGGGAAPAGAEEEEVDFDQRVGSILEELEMVSIEEAEKSFE 226

Query: 1889 GVCSRLRKSFEDLKPMFTGIESSDTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLL 1710
            G C+RLR  FE+LKP+F    S   +L ALVQQAF+GI TI +  +S  M K+EQ K +L
Sbjct: 227  GACTRLRTCFENLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYDMPKREQTKNML 286

Query: 1709 LRLLIHIKNQYSVLFTPEQVKEIDTLVNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPE 1530
            L+LL HIKN+YS + TP+Q  E+D+ V  LVFED      +   +G N  +    +   +
Sbjct: 287  LKLLFHIKNRYSDMLTPDQRDELDSRVRQLVFEDG-----KDNANGPNATSTNAAAPSGQ 341

Query: 1529 ISSGGSKPYLGPKAVELYTLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRF 1350
            + S    P+          +E+P    ++NR+  SPLLDLHADYDE+SLPSPTR + P F
Sbjct: 342  VLS-ERLPFESGAGNSFSKVEIP----AKNRM-VSPLLDLHADYDENSLPSPTRDSKPPF 395

Query: 1349 SIPKXXXXXXXXXXXSHTI---EAEDAAVDPY--VTDALKAVSSYQLKFGXXXXXXXXXX 1185
             +PK                    E A    Y    DALKAV  YQ K G          
Sbjct: 396  DVPKPIGYGALPMAPDRPSVLERVEPAKNSSYQSFNDALKAVCYYQQKHGQKSNFASDDL 455

Query: 1184 XXPTPSEEGVKEDDSHDEV---CSSSVAANVRTVNIA----ASPVVMSSCSDQL-----N 1041
              PTPS +G K  D   +V    SS  A+N   + I     + P  +SS SD        
Sbjct: 456  PSPTPSGDGDKSGDKGGDVFGEVSSFSASNKIALPIVNQMPSRPSTVSSNSDSFAGGPPG 515

Query: 1040 SVKLVGQVSTESKPVLKPALKSRDPRLKFMKSEVRGSSEGNR--------GALDNVIAIG 885
              K +    + S  +LK   KSRDPRLKF+  +  G ++ NR         + D  +  G
Sbjct: 516  YAKQIENSVSGSNHLLKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNPSKDRTMGGG 575

Query: 884  TP-NVRKHKTFDDPFAGDHIMKRQRNGFTSSRDMQITSGGGGPLEDSSITSESSDKNQAN 708
               N RK+K  D+P   ++ +KR R    + RDMQ T  GG   +  +I+S SSD  Q N
Sbjct: 576  VSINSRKNKAVDEPMVDENALKRSRGVIGNLRDMQPTGRGGWAKDGGNISSYSSDGFQPN 635

Query: 707  EKFQVDMRKPGTSIVGSDRNLVSKSNFSVLNGXXXXXXXXXXXXXXXXXXLK-------- 552
            +  ++     G   + +D  L S  N +  N                             
Sbjct: 636  QNTRLGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQTSSAPAVSLPA 695

Query: 551  -----AVNPTILMQLHQMEQKRI-AAENQQKANASLSVMETVPNENGLSGSVSSLITRPE 390
                 AVNPT+LMQ  QMEQ+++ A+E QQK  AS+ +       N   G V  L   P+
Sbjct: 696  MLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGM-----TSNVTPGMVLPLGNAPK 750

Query: 389  DAGTNQLGISQIAP----QPTSVSTQNDIGRIRMKPRDPRRVLHNNMLQKHDAV 240
               T    +  + P    Q   + +QND G IRMKPRDPRR+LH+N++QK+D V
Sbjct: 751  T--TEVAAVPSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTV 802



 Score = 62.0 bits (149), Expect = 7e-06
 Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 11/57 (19%)
 Frame = -1

Query: 2381 EISAEDFKQEGRDG-----------RSRMWMGYPMSKNYAPNLYSFAWAQAVQNKPL 2244
            EISA+DFK+E               RSR+WMGY + ++YAP  +SFAWAQAVQNKPL
Sbjct: 59   EISADDFKKESSAAGGAAAAAAAQQRSRVWMGYNIPRSYAPAFHSFAWAQAVQNKPL 115


>dbj|BAT14213.1| Os11g0521900, partial [Oryza sativa Japonica Group]
          Length = 796

 Score =  298 bits (764), Expect = 2e-84
 Identities = 229/648 (35%), Positives = 313/648 (48%), Gaps = 50/648 (7%)
 Frame = -1

Query: 2051 ETTDLSSDKPQNXXXXXXXXXXXSQDIG------DFDRRVGLILEELDAITVEEAETSFD 1890
            ET DL SD P+            +   G      DFD+RVG ILEEL+ +++EEAE SF+
Sbjct: 167  ETIDLDSDAPEKSESMVAMYGGGAAPAGAEEEEVDFDQRVGSILEELEMVSIEEAEKSFE 226

Query: 1889 GVCSRLRKSFEDLKPMFTGIESSDTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLL 1710
            G C+RLR  FE+LKP+F    S   +L ALVQQAF+GI TI +  +S  M K+EQ K +L
Sbjct: 227  GACTRLRTCFENLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYDMPKREQTKNML 286

Query: 1709 LRLLIHIKNQYSVLFTPEQVKEIDTLVNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPE 1530
            L+LL HIKN+YS + TP+Q  E+D+ V  LVFED      +   +G N  +    +   +
Sbjct: 287  LKLLFHIKNRYSDMLTPDQRDELDSRVRQLVFEDG-----KDNANGPNATSTNAAAPSGQ 341

Query: 1529 ISSGGSKPYLGPKAVELYTLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRF 1350
            + S    P+          +E+P    ++NR+  SPLLDLHADYDE+SLPSPTR + P F
Sbjct: 342  VLS-ERLPFESGAGNSFSKVEIP----AKNRM-VSPLLDLHADYDENSLPSPTRDSKPPF 395

Query: 1349 SIPKXXXXXXXXXXXSHTI---EAEDAAVDPY--VTDALKAVSSYQLKFGXXXXXXXXXX 1185
             +PK                    E A    Y    DALKAV  YQ K G          
Sbjct: 396  DVPKPIGYGALPMAPDRPSVLERVEPAKNSSYQSFNDALKAVCYYQQKHGQKSNFASDDL 455

Query: 1184 XXPTPSEEGVKEDDSHDEV---CSSSVAANVRTVNIA----ASPVVMSSCSDQL-----N 1041
              PTPS +G K  D   +V    SS  A+N   + I     + P  +SS SD        
Sbjct: 456  PSPTPSGDGDKSGDKGGDVFGEVSSFSASNKIALPIVNQMPSRPSTVSSNSDSFAGGPPG 515

Query: 1040 SVKLVGQVSTESKPVLKPALKSRDPRLKFMKSEVRGSSEGNR--------GALDNVIAIG 885
              K +    + S  +LK   KSRDPRLKF+  +  G ++ NR         + D  +  G
Sbjct: 516  YAKQIENSVSGSNHLLKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNPSKDRTMGGG 575

Query: 884  TP-NVRKHKTFDDPFAGDHIMKRQRNGFTSSRDMQITSGGGGPLEDSSITSESSDKNQAN 708
               N RK+K  D+P   ++ +KR R    + RDMQ T  GG   +  +I+S SSD  Q N
Sbjct: 576  VSINSRKNKAVDEPMVDENALKRSRGVIGNLRDMQPTGRGGWAKDGGNISSYSSDGFQPN 635

Query: 707  EKFQVDMRKPGTSIVGSDRNLVSKSNFSVLNGXXXXXXXXXXXXXXXXXXLK-------- 552
            +  ++     G   + +D  L S  N +  N                             
Sbjct: 636  QNTRLGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQTSSAPAVSLPA 695

Query: 551  -----AVNPTILMQLHQMEQKRI-AAENQQKANASLSVMETVPNENGLSGSVSSLITRPE 390
                 AVNPT+LMQ  QMEQ+++ A+E QQK  AS+ +       N   G V  L   P+
Sbjct: 696  MLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGM-----TSNVTPGMVLPLGNAPK 750

Query: 389  DAGTNQLGISQIAP----QPTSVSTQNDIGRIRMKPRDPRRVLHNNML 258
               T    +  + P    Q   + +QND G IRMKPRDPRR+LH+N++
Sbjct: 751  T--TEVAAVPSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIV 796



 Score = 62.0 bits (149), Expect = 6e-06
 Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 11/57 (19%)
 Frame = -1

Query: 2381 EISAEDFKQEGRDG-----------RSRMWMGYPMSKNYAPNLYSFAWAQAVQNKPL 2244
            EISA+DFK+E               RSR+WMGY + ++YAP  +SFAWAQAVQNKPL
Sbjct: 59   EISADDFKKESSAAGGAAAAAAAQQRSRVWMGYNIPRSYAPAFHSFAWAQAVQNKPL 115


>ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Nelumbo nucifera]
          Length = 1313

 Score =  301 bits (772), Expect = 1e-82
 Identities = 233/682 (34%), Positives = 347/682 (50%), Gaps = 53/682 (7%)
 Frame = -1

Query: 1967 DFDRRVGLILEELDAITVEEAETSFDGVCSRLRKSFEDLKPMFTGIESSDTVLHALVQQA 1788
            +F++R+  I E L+ +TV+EA+ SFD +C R+R S E L+ M +  E+    +  L++Q+
Sbjct: 219  EFEKRLNSIRECLETVTVKEADKSFDAICFRMRTSLESLQAMIS--ENRVPAMDDLIEQS 276

Query: 1787 FMGIQTIYSALHSVTMLKKEQNKQLLLRLLIHIKNQYSVLFTPEQVKEIDTLVNSLVFED 1608
            F GIQTI S   S+T  ++EQNK +  RL++H+K Q  VLF+P+++KEI+++V SL    
Sbjct: 277  FTGIQTINSVYCSMTPQQQEQNKDIFSRLIVHLKIQEPVLFSPDRMKEIESMVRSLDCPS 336

Query: 1607 QF-------KEKVQHGGSGNNMNNNTVLSKDPEISSGGSKPY-LGPKAVEL--------- 1479
                     +EK    G   N+ N+++LS+        SK + L P  V+          
Sbjct: 337  ALSNIKVLNQEKEALVGVRENIKNSSILSEKAGNGVDFSKKFQLEPMPVKYGDWDNLNTR 396

Query: 1478 -YTLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTRQNLPRFSIPKXXXXXXXXXXXS 1302
              T +  +   SR+R+ + PLLDLH D+D DSLPSPTR+  P   + K            
Sbjct: 397  SETSKAGLSFGSRSRIGFGPLLDLHRDHDADSLPSPTRKAPPPLPMQKPLSISDGTPRSD 456

Query: 1301 HTI-----EAEDAAVDPYVTDALKAVSSYQLKFGXXXXXXXXXXXXPTPSEEGVKED-DS 1140
                    + +D A+ PY TDALKAVS+YQ KFG            PTPSEE    D D 
Sbjct: 457  LVTNIVEDKMDDTALHPYETDALKAVSTYQQKFGRTSLLLSDRLPSPTPSEECDDGDGDI 516

Query: 1139 HDEVCSSSVAANVRTVNIAASPVVMSSC---SDQLNSVKL-----VGQVSTESKPVLKPA 984
            + EV SS+    V T+N + S   +SS    +D L+   L     VGQ+ + S  V++ A
Sbjct: 517  NGEVSSSTTVGGVATINSSTSLKTVSSATSYADNLSGQGLVPAVSVGQLGSMSSHVIRTA 576

Query: 983  LKSRDPRLKFMKSEV------RGSSEGNRGALDNVIAIGTPNVRKHKTFDDPFAGDHIMK 822
             K+RDPRL++  SEV      +    G+     +    G    RKHK  ++    DH  K
Sbjct: 577  -KNRDPRLRYANSEVGPLDLNQRPPSGDHDIRKSEPLGGIMGSRKHKIVEESLLDDHTFK 635

Query: 821  RQRNGFT---SSRDMQITSGGGGPLED-SSITSESSDKNQANEKFQVDMRKPGTSIVG-S 657
            RQRNG     +S D+Q+ SG GG LE+ SS+  + +D+++  EK + D RK G+      
Sbjct: 636  RQRNGLINSGASGDVQVVSGSGGWLEESSSMGLQPTDRSRLIEKRESDPRKLGSGEASFG 695

Query: 656  DRNLVSKSNFSVLNGXXXXXXXXXXXXXXXXXXLK---AVNPTILMQLHQMEQKRIAAEN 486
            ++     S ++V  G                  L    AVNPT+LM L +ME +R+A E 
Sbjct: 696  NKQDTGCSTYNVTTGGNEQLTASGIGSTVSLPSLLKDIAVNPTMLMHLIKMEHQRLAVEA 755

Query: 485  QQK-ANASLSVMET-----VPNENGLSGSVSSLITRPEDAGTNQLGISQIAPQPTSVSTQ 324
             QK  N + S M++     +P +       S  ++ PE       G SQI+ Q  S+   
Sbjct: 756  LQKCGNPAQSTMQSSSSSVMPGKIASVNIASKTLSEPE---KKSAGNSQISVQTASMIPH 812

Query: 323  NDIGRIRMKPRDPRRVLHNNMLQKHDAVLLEQNPIDGATS-RPQSSMECSSTRELAVQAH 147
             D+G+IRMKPRDPRR+LH+N  QK D+   E+   +G  S    +  +    R+   QA 
Sbjct: 813  GDLGKIRMKPRDPRRILHSNTFQKSDSSGPERFKANGTPSPNTPTCRDNLIVRQQGEQAQ 872

Query: 146  PKVIPTQFSSPPKVTQQLTKNL 81
               + +Q ++PP + QQ TK L
Sbjct: 873  TNSLLSQSTAPPDIAQQFTKKL 894


>ref|XP_020192785.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Aegilops
            tauschii subsp. tauschii]
 ref|XP_020192786.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Aegilops
            tauschii subsp. tauschii]
          Length = 1252

 Score =  301 bits (770), Expect = 2e-82
 Identities = 244/721 (33%), Positives = 349/721 (48%), Gaps = 62/721 (8%)
 Frame = -1

Query: 2051 ETTDLSSD---KPQNXXXXXXXXXXXSQDIGDFDRRVGLILEELDAITVEEAETSFDGVC 1881
            ET DL SD   K ++           + D  DFD+RVG ILEEL+ +++EEAE SF+G C
Sbjct: 150  ETIDLDSDAQDKSESVAMEQTPLAFEAADELDFDQRVGSILEELERLSIEEAEKSFEGSC 209

Query: 1880 SRLRKSFEDLKPMFTGIESSDTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRL 1701
            +RLR  FE LKP+F    S   +L ALVQQAF+GI TI +  +S  M K+EQNK +LL+L
Sbjct: 210  ARLRSCFESLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYAMPKREQNKNMLLKL 269

Query: 1700 LIHIKNQYSVLFTPEQVKEIDTLVNSLVFEDQFKEKVQHGGSGNNMNNNT---------V 1548
            L HIKN+YS +    Q  E+D+ V  LVF D          +G+N +  T         V
Sbjct: 270  LFHIKNRYSDMLALSQRDELDSRVRQLVFVD------GEDNAGSNCSTKTVNVVVQSGQV 323

Query: 1547 LSKDPEISSGGSKPYLGPKAVELYTLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTR 1368
             S    + SG + P  G       + E+P    + NR+  SPLLDLHADYDE+SLPSPTR
Sbjct: 324  PSDRLPVESGAANPLRGS---SFPSWEIP----ANNRM-VSPLLDLHADYDENSLPSPTR 375

Query: 1367 QNLPRFSIPKXXXXXXXXXXXSHTIEAEDAAVDP-------YVTDALKAVSSYQLKFGXX 1209
             + P F +PK                AE   VDP        V DALK VSSY+ K+G  
Sbjct: 376  DSAPPFPVPKPIGFGVFPMAPDRYFLAE--RVDPSKKVLYTCVNDALKDVSSYRQKYGQT 433

Query: 1208 XXXXXXXXXXPTPSEEGVKEDDSHDEVCS--SSVAANVRTV----NI--AASPVVMSSCS 1053
                      PTPS++G K  D   ++    SS +A+ ++     N+  A+ P  + S +
Sbjct: 434  STFASDDLPSPTPSDDGDKSGDKEGDIFGEVSSFSASNKSAPPSGNLIPASRPSAVISSN 493

Query: 1052 DQL-----NSVKLVGQVSTESKPVLKPALKSRDPRLKFMKSEVRGSSEGNR--------- 915
            D          K + Q  +     LKP+ KSRDPRL+F+  +  G+++ NR         
Sbjct: 494  DSFAGGPPGYAKQIEQSVSGPSHALKPSAKSRDPRLRFLNRDSGGTADANRHVNFAEPNA 553

Query: 914  ---GALDNVIAIGTPNVRKHKTFDDPFAGDHIMKRQRNGFTSSRDMQITSGGGGPLEDSS 744
               G L  V+   + N RKHK    P  G+ ++KR R    + RDMQ+     G    S+
Sbjct: 554  SKDGTLGGVV---SDNSRKHKATGQPLTGETVLKRARESTGNPRDMQVPPSRDG----SN 606

Query: 743  ITSESSDKNQANEKFQVDMRKPGTSIVGSDRNLVSK-SNFSVLNGXXXXXXXXXXXXXXX 567
            I+S S D+ Q+N+   ++ +  G   + +   L+S  S+     G               
Sbjct: 607  ISSYSGDRVQSNQHKGLETKAAGNPSIRTSSQLISNVSSIPDSTGTLQASQPNSVPQTSA 666

Query: 566  XXXLK--------AVNPTILMQLHQMEQKRIAAENQQKANASLSVMETVPNENGLSGSVS 411
               +         AVNPT+LM   QME ++ +A   Q A+  +S        +G+  +V+
Sbjct: 667  APIVSLPAVLKDIAVNPTVLMHWIQMEHQKRSASEPQPASGIIS--------SGMINNVT 718

Query: 410  SLITRPEDAGTNQLGISQI---APQPT----SVSTQNDIGRIRMKPRDPRRVLHNNMLQK 252
            + +  P         ++ I    PQ T    SV++QND G IRMK RDPRRVLHNN  QK
Sbjct: 719  AGMVIPPGNALKTAEVAHIPSYRPQATSQTASVNSQNDPGVIRMKARDPRRVLHNNTSQK 778

Query: 251  HDAVLLEQNPIDGAT--SRPQSSMECSSTRELAVQAHPKVIPTQFSSPPKVTQQLTKNLA 78
            +D    +Q   +G T  +   S     +  +LA Q    V+P+Q  S   +  Q T + +
Sbjct: 779  NDTPNSDQAKSNGITLPAFQDSKDNLINREQLAEQLQTTVLPSQPVSLSSIAGQSTMSAS 838

Query: 77   E 75
            +
Sbjct: 839  K 839



 Score = 63.9 bits (154), Expect = 2e-06
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 8/54 (14%)
 Frame = -1

Query: 2381 EISAEDFKQEGRDG--------RSRMWMGYPMSKNYAPNLYSFAWAQAVQNKPL 2244
            EISA DFK+             RSR+WMGY MS++YAP  +SFAWAQAVQNKPL
Sbjct: 53   EISAADFKESSSGTAAASASAQRSRVWMGYTMSRSYAPAFHSFAWAQAVQNKPL 106


>gb|EMS65645.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Triticum
            urartu]
          Length = 1119

 Score =  298 bits (764), Expect = 3e-82
 Identities = 239/719 (33%), Positives = 349/719 (48%), Gaps = 60/719 (8%)
 Frame = -1

Query: 2051 ETTDLSSD---KPQNXXXXXXXXXXXSQDIGDFDRRVGLILEELDAITVEEAETSFDGVC 1881
            ET DL SD   K ++           + D  DFD+RVG ILEEL+ +++EEAE SF+  C
Sbjct: 67   ETIDLDSDAQDKSESVDMEQTRLAVEAADELDFDQRVGSILEELERLSIEEAEKSFEASC 126

Query: 1880 SRLRKSFEDLKPMFTGIESSDTVLHALVQQAFMGIQTIYSALHSVTMLKKEQNKQLLLRL 1701
            +RLR  FE LKP+F    S   +L ALVQQAF+GI TI +  +S  M K+EQNK +LL+L
Sbjct: 127  ARLRSCFESLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYAMPKREQNKNMLLKL 186

Query: 1700 LIHIKNQYSVLFTPEQVKEIDTLVNSLVFEDQFKEKVQHGGSGNNMNNNTVLSKDPE--- 1530
            L HIKN+YS +    Q  E+D+ V  LVF D          +G+N +  TV    P    
Sbjct: 187  LFHIKNRYSDMLALNQRDELDSRVRQLVFVD------GEDNAGSNCSTKTVNVVVPSGQV 240

Query: 1529 ------ISSGGSKPYLGPKAVELYTLELPIPTASRNRVEYSPLLDLHADYDEDSLPSPTR 1368
                  + SG + P   P+     + E+P    + NR+  SPLLDLHADYDE+SLPSPTR
Sbjct: 241  PSDRLPVESGAANP---PRGSSFPSWEIP----ANNRI-VSPLLDLHADYDENSLPSPTR 292

Query: 1367 QNLPRFSIPKXXXXXXXXXXXSHTIEAE-----DAAVDPYVTDALKAVSSYQLKFGXXXX 1203
             + P FS+PK                AE        + P V DALK VSSY+ K+G    
Sbjct: 293  VSAPPFSVPKPIGFGVFPMAPDRYFSAERIDPSKIFLYPCVNDALKDVSSYRQKYGPTST 352

Query: 1202 XXXXXXXXPTPSEEGVKEDDSHDEVCS--SSVAANVRTV----NI--AASPVVMSSCSDQ 1047
                    PTPS++G K  D   ++    SS +A+ ++     N+  A+ P  + S +D 
Sbjct: 353  FASDDLPSPTPSDDGDKSGDKEGDIFGEVSSFSASNKSAPPSGNLMPASRPSAVISSNDS 412

Query: 1046 L-----NSVKLVGQVSTESKPVLKPALKSRDPRLKFMKSEVRGSSEGN------------ 918
                     K + Q  +     LKP+ KSRDPRL+F+  +  G+++ N            
Sbjct: 413  FAGGPPGYAKQIEQSVSGPSHALKPSAKSRDPRLRFLNRDSGGTADANIHVNLAEPNASK 472

Query: 917  RGALDNVIAIGTPNVRKHKTFDDPFAGDHIMKRQRNGFTSSRDMQITSGGGGPLEDSSIT 738
             G L  V+   + N RKHK  D P   + ++KR R    S RD+ +  G  G    S+I+
Sbjct: 473  DGTLGGVV---SDNSRKHKATDQPLMDETVLKRARESTGSPRDILVPPGRDG----SNIS 525

Query: 737  SESSDKNQANEKFQVDMRKPGTSIVGSDRNLVSK-SNFSVLNGXXXXXXXXXXXXXXXXX 561
            S S D+ Q+N+   ++ +      + +   L+S  S+     G                 
Sbjct: 526  SYSGDRVQSNKHTGLETKTARNPSIRTSSQLISNVSSIPDSTGTLQASQPNSVPQTSAAP 585

Query: 560  XLK--------AVNPTILMQLHQMEQKRIAAENQQKANASLSVMETVPNENGLSGSVSSL 405
             +         AVNPT+LM   QME ++ +A   Q A+  +S        +G+  +V++ 
Sbjct: 586  IVSLPAVLKDIAVNPTVLMHWIQMEHQKRSASEPQPASGIIS--------SGMINNVTAG 637

Query: 404  ITRPEDAGTNQLGISQI---APQPT----SVSTQNDIGRIRMKPRDPRRVLHNNMLQKHD 246
            +  P         ++ I    PQ T    SV++QND G IRMK RDPRRVLHNN  QK+D
Sbjct: 638  MVIPPGNALKTAEVAHIPSYRPQATSQTASVNSQNDPGVIRMKARDPRRVLHNNTSQKND 697

Query: 245  AVLLEQNPIDGAT--SRPQSSMECSSTRELAVQAHPKVIPTQFSSPPKVTQQLTKNLAE 75
             +  +Q   +G    +   S     + ++LA Q    V+P+Q  S   + +Q T + ++
Sbjct: 698  TLNSDQAKSNGIALPAFQDSKDNLINRQQLAEQLQTTVLPSQPVSLSSIARQSTMSASK 756