BLASTX nr result

ID: Cheilocostus21_contig00032092 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00032092
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDP44658.1| hypothetical protein JCGZ_19694 [Jatropha curcas]       55   6e-06
ref|XP_012092166.1| myb family transcription factor APL isoform ...    55   6e-06
ref|XP_020541415.1| myb family transcription factor APL isoform ...    55   6e-06

>gb|KDP44658.1| hypothetical protein JCGZ_19694 [Jatropha curcas]
          Length = 336

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 29/115 (25%)
 Frame = -3

Query: 311 LYGGDNNQLDLQHHMIVSSDQPPPPLDVFLQLANDESCLGKKMRSSPFN---PSDMPWDE 141
           +YGGD  QLDLQH+M       PP LD F+Q ++D  CLGKK R+SP++    S + W +
Sbjct: 184 IYGGD--QLDLQHNM-----DRPPSLDGFMQNSSDNICLGKK-RASPYSGSGKSPLIWSD 235

Query: 140 E--------ASKCA-------ISDHLQLG-------IDVDA----YEAKPVLSGD 54
           +        A  C          DH+Q+G        D+D+    YE KP+L GD
Sbjct: 236 DLRLQDLGSAPTCIGPPDDLFKGDHIQIGPPSMDRSTDLDSISDIYETKPMLQGD 290


>ref|XP_012092166.1| myb family transcription factor APL isoform X2 [Jatropha curcas]
          Length = 352

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 29/115 (25%)
 Frame = -3

Query: 311 LYGGDNNQLDLQHHMIVSSDQPPPPLDVFLQLANDESCLGKKMRSSPFN---PSDMPWDE 141
           +YGGD  QLDLQH+M       PP LD F+Q ++D  CLGKK R+SP++    S + W +
Sbjct: 200 IYGGD--QLDLQHNM-----DRPPSLDGFMQNSSDNICLGKK-RASPYSGSGKSPLIWSD 251

Query: 140 E--------ASKCA-------ISDHLQLG-------IDVDA----YEAKPVLSGD 54
           +        A  C          DH+Q+G        D+D+    YE KP+L GD
Sbjct: 252 DLRLQDLGSAPTCIGPPDDLFKGDHIQIGPPSMDRSTDLDSISDIYETKPMLQGD 306


>ref|XP_020541415.1| myb family transcription factor APL isoform X1 [Jatropha curcas]
          Length = 361

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 29/115 (25%)
 Frame = -3

Query: 311 LYGGDNNQLDLQHHMIVSSDQPPPPLDVFLQLANDESCLGKKMRSSPFN---PSDMPWDE 141
           +YGGD  QLDLQH+M       PP LD F+Q ++D  CLGKK R+SP++    S + W +
Sbjct: 209 IYGGD--QLDLQHNM-----DRPPSLDGFMQNSSDNICLGKK-RASPYSGSGKSPLIWSD 260

Query: 140 E--------ASKCA-------ISDHLQLG-------IDVDA----YEAKPVLSGD 54
           +        A  C          DH+Q+G        D+D+    YE KP+L GD
Sbjct: 261 DLRLQDLGSAPTCIGPPDDLFKGDHIQIGPPSMDRSTDLDSISDIYETKPMLQGD 315


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