BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00032046
         (595 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009406215.1| PREDICTED: uncharacterized protein LOC103989...   225   7e-68
ref|XP_008793119.1| PREDICTED: DNA-directed RNA polymerase III s...   192   1e-55
ref|XP_010924543.1| PREDICTED: DNA-directed RNA polymerase III s...   190   1e-54
gb|OVA01687.1| RNA polymerase III Rpc82 [Macleaya cordata]            162   8e-46
ref|XP_020264045.1| DNA-directed RNA polymerase III subunit RPC3...   166   3e-45
gb|ONK69129.1| uncharacterized protein A4U43_C05F19650 [Asparagu...   166   4e-45
ref|XP_020264043.1| DNA-directed RNA polymerase III subunit RPC3...   166   7e-45
ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III s...   161   3e-44
ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III s...   161   2e-43
ref|XP_020098905.1| DNA-directed RNA polymerase III subunit RPC3...   157   2e-43
ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III s...   159   8e-43
gb|PAN29179.1| hypothetical protein PAHAL_E02125 [Panicum hallii]     141   2e-37
ref|XP_004969534.1| DNA-directed RNA polymerase III subunit rpc3...   140   2e-37
ref|XP_020581932.1| DNA-directed RNA polymerase III subunit RPC3...   136   3e-35
gb|PON90856.1| RNA polymerase III Rpc [Trema orientalis]              137   2e-34
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...   134   2e-34
gb|PIA62732.1| hypothetical protein AQUCO_00200631v1 [Aquilegia ...   130   9e-34
ref|XP_015080143.1| PREDICTED: DNA-directed RNA polymerase III s...   132   9e-34
gb|PIA62731.1| hypothetical protein AQUCO_00200631v1 [Aquilegia ...   130   9e-34
gb|EEC71269.1| hypothetical protein OsI_03266 [Oryza sativa Indi...   131   1e-33

>ref|XP_009406215.1| PREDICTED: uncharacterized protein LOC103989158 [Musa acuminata
           subsp. malaccensis]
          Length = 516

 Score =  225 bits (573), Expect = 7e-68
 Identities = 118/170 (69%), Positives = 133/170 (78%), Gaps = 3/170 (1%)
 Frame = +2

Query: 95  AGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQLL 274
           AG GGA K++TQYMALFDNIL R+RF KFLAIVR+DLG QCETLLEGLLQH RLTFDQL+
Sbjct: 73  AGAGGATKSLTQYMALFDNILHRMRFTKFLAIVRDDLGPQCETLLEGLLQHGRLTFDQLV 132

Query: 275 VRATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKHSAK-- 448
           VRATSK  E  S+IR  L+   ERLVHG YVERCPRPEPFIAP+ EEGT+ AR+ SAK  
Sbjct: 133 VRATSKQSEDSSSIRDVLRKNLERLVHGQYVERCPRPEPFIAPTSEEGTASARRRSAKSK 192

Query: 449 -EQTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHSEDKLGVSVGDKRK 595
            E  ++EQ+AM AAA S AERFSV+  +G E  DV   DK  VSVGDKRK
Sbjct: 193 EETYSLEQQAMIAAALSHAERFSVITDSGRESSDVKDADKQDVSVGDKRK 242


>ref|XP_008793119.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Phoenix
           dactylifera]
          Length = 518

 Score =  192 bits (489), Expect(2) = 1e-55
 Identities = 107/172 (62%), Positives = 123/172 (71%), Gaps = 4/172 (2%)
 Frame = +2

Query: 92  PAGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQL 271
           PAG GG AK VTQYMALFDNIL R+RF KFLA+VR+DLG QCE LL GLLQ+ RLTF QL
Sbjct: 72  PAGPGGVAKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPQCEILLAGLLQNGRLTFGQL 131

Query: 272 LVRATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKHSAK- 448
           + RATS  PE  +++R  L+  F RLV   YVERCPRPEPFI PS +E T   R+ SAK 
Sbjct: 132 VERATSSKPEVSASMREGLRANFNRLVSARYVERCPRPEPFIEPSPQEETRSTRRRSAKT 191

Query: 449 --EQTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHSED-KLGVSVGDKRK 595
             E  +IEQ AM AAA SDAERFS +  T TE ++V + D    VSVGDKRK
Sbjct: 192 SEEILSIEQRAMVAAALSDAERFSEITDTATETIEVKATDHSSDVSVGDKRK 243



 Score = 52.0 bits (123), Expect(2) = 1e-55
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = +3

Query: 3   DLVAKVCGCLLRRGTLSLQEIVRSTELLNSQ 95
           DLVAKVC CLL RGTLSLQEI+R TEL +SQ
Sbjct: 20  DLVAKVCSCLLHRGTLSLQEIIRFTELSSSQ 50


>ref|XP_010924543.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Elaeis
           guineensis]
          Length = 518

 Score =  190 bits (483), Expect(2) = 1e-54
 Identities = 104/172 (60%), Positives = 123/172 (71%), Gaps = 4/172 (2%)
 Frame = +2

Query: 92  PAGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQL 271
           PAG GG  K VTQYMALFDNIL R+RF KFLA+VR+DLG +CE LL GLLQ+ RLTF QL
Sbjct: 72  PAGPGGVTKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPRCEILLAGLLQNGRLTFGQL 131

Query: 272 LVRATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKHSAK- 448
           + RA+S  PE  +++R  L+  F RLV   YVERCPRPEPFI PS +E T   RK SAK 
Sbjct: 132 VERASSNKPEVSASMREGLRANFNRLVSSRYVERCPRPEPFIDPSPQEETRSTRKRSAKT 191

Query: 449 --EQTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHSED-KLGVSVGDKRK 595
             E  ++EQ+AM AAA SDAERFS +  T TE ++V + D    VSVGDKRK
Sbjct: 192 SEEMLSVEQQAMVAAALSDAERFSEITDTSTENIEVKATDHDPDVSVGDKRK 243



 Score = 50.8 bits (120), Expect(2) = 1e-54
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +3

Query: 3   DLVAKVCGCLLRRGTLSLQEIVRSTELLNSQ 95
           DLVAKVC CLL RGTL+LQEI+R TEL +SQ
Sbjct: 20  DLVAKVCSCLLHRGTLTLQEIIRFTELSSSQ 50


>gb|OVA01687.1| RNA polymerase III Rpc82 [Macleaya cordata]
          Length = 287

 Score =  162 bits (409), Expect = 8e-46
 Identities = 85/172 (49%), Positives = 115/172 (66%), Gaps = 6/172 (3%)
 Frame = +2

Query: 98  GTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQLLV 277
           G G A K +TQY  +F+NIL R+RF KFLAIV E+L  +CE LLEGLLQH RLT +Q+++
Sbjct: 74  GFGVAPKVITQYTTIFENILHRMRFSKFLAIVSEELDKECEELLEGLLQHGRLTLEQIIL 133

Query: 278 RATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKHSAK--- 448
           RA SK  +G S I+  L+ +F +LV+ HYVERCP  EPF+AP  E+ T    +  AK   
Sbjct: 134 RAISKQNDGNSNIQDALRASFVKLVNAHYVERCPASEPFLAPPSEDETPSTARRGAKSAK 193

Query: 449 --EQTTIEQEAMFAAAFSDAERFSVVLGTGTE-GLDVHSEDKLGVSVGDKRK 595
             E+ T+EQ A+  AA SD ERF++V+ +GT+   +  SE     S+G+KRK
Sbjct: 194 LVEEETVEQRAITVAAPSDGERFAIVIDSGTDVTAEAKSEGNPSTSIGEKRK 245


>ref|XP_020264045.1| DNA-directed RNA polymerase III subunit RPC3 isoform X2 [Asparagus
           officinalis]
          Length = 529

 Score =  166 bits (420), Expect = 3e-45
 Identities = 91/170 (53%), Positives = 111/170 (65%), Gaps = 4/170 (2%)
 Frame = +2

Query: 98  GTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQLLV 277
           G GG  K  T+YM LFDN+L RLRF KFLAIVR DLG +CE LLEGLLQH RLTFDQL++
Sbjct: 81  GPGGLPKLQTKYMILFDNVLHRLRFAKFLAIVRNDLGPKCEALLEGLLQHGRLTFDQLVL 140

Query: 278 RATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKHSAKEQT 457
           RATSK PE     + C++  F  LV  HY+ERCPR +PFIAP+ E         S+ E  
Sbjct: 141 RATSKQPE---ATQDCVRTNFNELVQSHYIERCPRADPFIAPTPETKPGRRGSKSSVEIP 197

Query: 458 TIEQEAMFAAAFSDAERFSVVLGTGTEGLDVH----SEDKLGVSVGDKRK 595
           TIE++A+ AA+ SD ERFS +      G++      SE    VSVG+KRK
Sbjct: 198 TIEEQAILAASLSDIERFSGISPATNAGVEEKDEKLSEHSPSVSVGNKRK 247


>gb|ONK69129.1| uncharacterized protein A4U43_C05F19650 [Asparagus officinalis]
          Length = 542

 Score =  166 bits (420), Expect = 4e-45
 Identities = 91/170 (53%), Positives = 111/170 (65%), Gaps = 4/170 (2%)
 Frame = +2

Query: 98  GTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQLLV 277
           G GG  K  T+YM LFDN+L RLRF KFLAIVR DLG +CE LLEGLLQH RLTFDQL++
Sbjct: 94  GPGGLPKLQTKYMILFDNVLHRLRFAKFLAIVRNDLGPKCEALLEGLLQHGRLTFDQLVL 153

Query: 278 RATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKHSAKEQT 457
           RATSK PE     + C++  F  LV  HY+ERCPR +PFIAP+ E         S+ E  
Sbjct: 154 RATSKQPE---ATQDCVRTNFNELVQSHYIERCPRADPFIAPTPETKPGRRGSKSSVEIP 210

Query: 458 TIEQEAMFAAAFSDAERFSVVLGTGTEGLDVH----SEDKLGVSVGDKRK 595
           TIE++A+ AA+ SD ERFS +      G++      SE    VSVG+KRK
Sbjct: 211 TIEEQAILAASLSDIERFSGISPATNAGVEEKDEKLSEHSPSVSVGNKRK 260


>ref|XP_020264043.1| DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Asparagus
           officinalis]
 ref|XP_020264044.1| DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Asparagus
           officinalis]
          Length = 584

 Score =  166 bits (420), Expect = 7e-45
 Identities = 91/170 (53%), Positives = 111/170 (65%), Gaps = 4/170 (2%)
 Frame = +2

Query: 98  GTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQLLV 277
           G GG  K  T+YM LFDN+L RLRF KFLAIVR DLG +CE LLEGLLQH RLTFDQL++
Sbjct: 81  GPGGLPKLQTKYMILFDNVLHRLRFAKFLAIVRNDLGPKCEALLEGLLQHGRLTFDQLVL 140

Query: 278 RATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKHSAKEQT 457
           RATSK PE     + C++  F  LV  HY+ERCPR +PFIAP+ E         S+ E  
Sbjct: 141 RATSKQPE---ATQDCVRTNFNELVQSHYIERCPRADPFIAPTPETKPGRRGSKSSVEIP 197

Query: 458 TIEQEAMFAAAFSDAERFSVVLGTGTEGLDVH----SEDKLGVSVGDKRK 595
           TIE++A+ AA+ SD ERFS +      G++      SE    VSVG+KRK
Sbjct: 198 TIEEQAILAASLSDIERFSGISPATNAGVEEKDEKLSEHSPSVSVGNKRK 247


>ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X2
           [Vitis vinifera]
          Length = 429

 Score =  161 bits (408), Expect = 3e-44
 Identities = 92/178 (51%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
 Frame = +2

Query: 80  ALKLPAGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLT 259
           A++   G G A + VTQYMALF NIL R+RF KFLAIV E+L  +CE +LEGLLQH RLT
Sbjct: 68  AIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLT 127

Query: 260 FDQLLVRATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKH 439
            +Q+L RA S   EG   ++  L+ +F +LV  H+VERCP  EPF+AP  EE T  ARK 
Sbjct: 128 LEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEETP-ARKR 186

Query: 440 SAK------EQTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHSEDKLGVSVGDKRK 595
            AK      E  TIEQ A+ AAA  DA+RFSV++ TGT+      +D   V+ G+KRK
Sbjct: 187 GAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTD-----VDDSPNVTAGEKRK 239


>ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
           [Vitis vinifera]
 emb|CBI22720.3| unnamed protein product, partial [Vitis vinifera]
          Length = 524

 Score =  161 bits (408), Expect = 2e-43
 Identities = 92/178 (51%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
 Frame = +2

Query: 80  ALKLPAGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLT 259
           A++   G G A + VTQYMALF NIL R+RF KFLAIV E+L  +CE +LEGLLQH RLT
Sbjct: 68  AIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLT 127

Query: 260 FDQLLVRATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKH 439
            +Q+L RA S   EG   ++  L+ +F +LV  H+VERCP  EPF+AP  EE T  ARK 
Sbjct: 128 LEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEETP-ARKR 186

Query: 440 SAK------EQTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHSEDKLGVSVGDKRK 595
            AK      E  TIEQ A+ AAA  DA+RFSV++ TGT+      +D   V+ G+KRK
Sbjct: 187 GAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTD-----VDDSPNVTAGEKRK 239


>ref|XP_020098905.1| DNA-directed RNA polymerase III subunit RPC3 [Ananas comosus]
          Length = 513

 Score =  157 bits (397), Expect(2) = 2e-43
 Identities = 84/167 (50%), Positives = 111/167 (66%), Gaps = 3/167 (1%)
 Frame = +2

Query: 104 GGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQLLVRA 283
           G   KT+TQY+ALFDNIL R+RFPKFL +V+ DLG + E LLEGLLQ+ RLTFDQL+ R 
Sbjct: 73  GSTTKTMTQYIALFDNILHRMRFPKFLMVVKYDLGHEGEVLLEGLLQNGRLTFDQLVERT 132

Query: 284 TSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKHSAKEQ--T 457
            SK  E  ++IR  ++  F  LVH HYVERCP+PEPF+ P  E+ ++ ARK  AK     
Sbjct: 133 LSKTTEASASIREEMRANFNNLVHSHYVERCPKPEPFVGPDSEDQSTFARKRRAKTVPIL 192

Query: 458 TIEQEAMFAAAFSDAERFSVVLGTGTEGLD-VHSEDKLGVSVGDKRK 595
           ++EQ+ M AA  S+ ERFS +   G   +D V ++  +    G+KRK
Sbjct: 193 SLEQQVMVAATLSNGERFSEISNGGKMTVDTVVADHHVATFSGEKRK 239



 Score = 47.0 bits (110), Expect(2) = 2e-43
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = +3

Query: 3   DLVAKVCGCLLRRGTLSLQEIVRSTELLNSQ 95
           DLVAKVC CLL RG LSLQE+VR T+L  SQ
Sbjct: 20  DLVAKVCSCLLHRGALSLQEVVRFTKLSISQ 50


>ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo
           nucifera]
          Length = 531

 Score =  159 bits (402), Expect(2) = 8e-43
 Identities = 84/181 (46%), Positives = 119/181 (65%), Gaps = 9/181 (4%)
 Frame = +2

Query: 80  ALKLPAGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLT 259
           ++++  G G A K +TQY A+FDNIL R+RFPKFL IV E+L  +CE +LEGL QH RLT
Sbjct: 68  SIQIEGGVGAAPKVITQYTAIFDNILHRMRFPKFLTIVSEELDKECEEILEGLFQHGRLT 127

Query: 260 FDQLLVRATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARK- 436
            +Q+++RA S   EG ST++  ++ +F R+V  HYVERCP  EPF+AP  EE     ++ 
Sbjct: 128 LEQIILRAVSNQNEGNSTVQDAVRESFVRIVSSHYVERCPASEPFLAPPDEEENPTKKRA 187

Query: 437 ---HSAKEQTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHSEDKLG-----VSVGDKR 592
                A+E  T+E+ A+ AAA  ++ERF+V+  TGT   DV S D+ G      ++G+KR
Sbjct: 188 KSARLAEEIETLEKRAISAAAPLESERFAVITDTGT---DVKSGDRSGSRFLDTAIGEKR 244

Query: 593 K 595
           K
Sbjct: 245 K 245



 Score = 42.7 bits (99), Expect(2) = 8e-43
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +3

Query: 3   DLVAKVCGCLLRRGTLSLQEIVRSTELLNSQ 95
           DLVAKVC CLLR+G+L+L +I R TEL  +Q
Sbjct: 20  DLVAKVCECLLRKGSLTLADITRFTELPQAQ 50


>gb|PAN29179.1| hypothetical protein PAHAL_E02125 [Panicum hallii]
          Length = 506

 Score =  141 bits (355), Expect(2) = 2e-37
 Identities = 83/177 (46%), Positives = 113/177 (63%), Gaps = 4/177 (2%)
 Frame = +2

Query: 77  RALKLPAGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRL 256
           +A   P G+GG  KTVT Y+A+FDN+L RLRF KFL++VR D+  + E LLEGLLQ+ RL
Sbjct: 65  QAFSTPRGSGG--KTVTVYLAIFDNVLHRLRFSKFLSVVRADIP-ESEDLLEGLLQNGRL 121

Query: 257 TFDQLLVRATSKHPEGC-STIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMAR 433
           TFDQL+ R  SK P+G     R  ++  F +LV+ HYVERCP+PEPF  P ++E     R
Sbjct: 122 TFDQLVWRTISKIPDGSPKPTREEIRMNFNKLVYAHYVERCPKPEPFFDPLIDEQPPSTR 181

Query: 434 KHSAKEQTTI---EQEAMFAAAFSDAERFSVVLGTGTEGLDVHSEDKLGVSVGDKRK 595
           K + +   T+   EQ+ +  AA SDAERFS +  +  E  + + +D   V+ G KRK
Sbjct: 182 KRAPRAVETVLSLEQKVVRTAALSDAERFSEIPYSMEESSNANDDDHHAVA-GGKRK 237



 Score = 42.7 bits (99), Expect(2) = 2e-37
 Identities = 21/30 (70%), Positives = 22/30 (73%)
 Frame = +3

Query: 6   LVAKVCGCLLRRGTLSLQEIVRSTELLNSQ 95
           LV+KVCGCLLR G LSL EIVR  EL   Q
Sbjct: 21  LVSKVCGCLLRHGALSLHEIVRRLELSPGQ 50


>ref|XP_004969534.1| DNA-directed RNA polymerase III subunit rpc3 [Setaria italica]
 ref|XP_004969535.1| DNA-directed RNA polymerase III subunit rpc3 [Setaria italica]
 ref|XP_004969536.1| DNA-directed RNA polymerase III subunit rpc3 [Setaria italica]
 gb|KQL06412.1| hypothetical protein SETIT_001120mg [Setaria italica]
          Length = 506

 Score =  140 bits (354), Expect(2) = 2e-37
 Identities = 86/177 (48%), Positives = 111/177 (62%), Gaps = 4/177 (2%)
 Frame = +2

Query: 77  RALKLPAGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRL 256
           +A   P G+G   KTVT Y+A+FDN+L RLRF KFL++VR D+  + E LLEGLLQ+ RL
Sbjct: 65  QAYSTPRGSGD--KTVTVYLAIFDNVLHRLRFSKFLSVVRVDIP-ESEVLLEGLLQNGRL 121

Query: 257 TFDQLLVRATSKHPEGC-STIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMAR 433
           TFDQL+ RA SK PEG     R  ++  F +LV+ HYVERCP+PEPF  P L+E  +  R
Sbjct: 122 TFDQLVERAISKIPEGSPKPTREEIRMNFNKLVYAHYVERCPKPEPFFDPLLDEQPTSTR 181

Query: 434 KHSAK---EQTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHSEDKLGVSVGDKRK 595
           K + K      ++EQ+ +  AA SDAERFS +     EG    S+D      G KRK
Sbjct: 182 KRAPKTVEAVLSLEQKIIRTAALSDAERFSEI-PYSMEGSSNASDDHHHAVAGGKRK 237



 Score = 43.1 bits (100), Expect(2) = 2e-37
 Identities = 21/30 (70%), Positives = 23/30 (76%)
 Frame = +3

Query: 6   LVAKVCGCLLRRGTLSLQEIVRSTELLNSQ 95
           LV+KVCGCLLR G LSLQEIVR   L + Q
Sbjct: 21  LVSKVCGCLLRHGALSLQEIVRRLGLSSGQ 50


>ref|XP_020581932.1| DNA-directed RNA polymerase III subunit RPC3 [Phalaenopsis
           equestris]
          Length = 493

 Score =  136 bits (342), Expect(2) = 3e-35
 Identities = 79/169 (46%), Positives = 101/169 (59%), Gaps = 3/169 (1%)
 Frame = +2

Query: 98  GTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQLLV 277
           G GG  K  T YMA+FDN++ R+RF KFL +V+E LG Q   LLEG LQH RLTF  L  
Sbjct: 74  GLGGVTKPTTLYMAVFDNVIHRMRFSKFLLVVKEHLGNQYTELLEGFLQHGRLTFQLLYD 133

Query: 278 RATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKH--SAKE 451
           RA+     G    R  +   F +LVH HYVERCP+ EPF+ P  ++  S   K   S +E
Sbjct: 134 RASGL--SGGKAKREDVLANFNKLVHAHYVERCPKGEPFLEPKADDDISSVGKQVKSVEE 191

Query: 452 QTTIEQEAMFAAAFSDAERFSVVLGTGTEGL-DVHSEDKLGVSVGDKRK 595
              +EQEA+ AAA  DA+RFS ++    E L  V ++  L VS G+KRK
Sbjct: 192 TRNVEQEAIIAAAPLDADRFSGIMMNTEENLKHVKNDSSLEVSAGNKRK 240



 Score = 40.4 bits (93), Expect(2) = 3e-35
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = +3

Query: 3   DLVAKVCGCLLRRGTLSLQEIVRSTELLNSQ 95
           ++VAKVC CL+ RG+LS  E+VR TEL   Q
Sbjct: 20  NVVAKVCECLIHRGSLSFMEVVRFTELSQGQ 50


>gb|PON90856.1| RNA polymerase III Rpc [Trema orientalis]
          Length = 528

 Score =  137 bits (345), Expect = 2e-34
 Identities = 79/175 (45%), Positives = 106/175 (60%), Gaps = 9/175 (5%)
 Frame = +2

Query: 98  GTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQLLV 277
           G GG    VTQY+ALFDNIL RLRFPKFLAIV ++L   CE + EGL+QH RLT +Q+  
Sbjct: 73  GAGGNEVKVTQYLALFDNILHRLRFPKFLAIVSQELDKDCEEIFEGLIQHGRLTLEQISD 132

Query: 278 RATS------KHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKH 439
           RA S      K   G   +R  ++ +F +L++  +VERCP PEPF+ P  E  +S  R  
Sbjct: 133 RAESSAKTGGKPSSGGPAVRDAVRESFHKLLNSRFVERCPAPEPFLEPPSEPKSSNKRGA 192

Query: 440 SAK---EQTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHSEDKLGVSVGDKRK 595
            +K      T EQ  + +AA  +A RFS++  +GT+ LD   +   G SVG+KRK
Sbjct: 193 KSKLAGASETEEQRILASAAPIEALRFSLLTTSGTD-LDAEKDGAAGSSVGEKRK 246


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Solanum
           lycopersicum]
          Length = 525

 Score =  134 bits (337), Expect(2) = 2e-34
 Identities = 79/178 (44%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
 Frame = +2

Query: 80  ALKLPAGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLT 259
           A++ P G G  AK +TQYMALFDNI+ +LRFPKF+ IV E+LG +CE +LE LLQH RL+
Sbjct: 68  AIRQPGGFGEEAKIITQYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWLLQHGRLS 127

Query: 260 FDQLLVRATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKH 439
             Q++V+      +G S+     Q++F RLV+  +VERCP P+P + P  EE T+ A+K 
Sbjct: 128 LSQIIVKYKQASKQGDSS-ADAAQDSFNRLVNARFVERCPAPDPLLEPPAEEETA-AKKR 185

Query: 440 SAK----EQTTIEQEAMFAAAFSDAERFSV--VLGTGTEGLDVHSEDKLGVSVGDKRK 595
            AK    +  T+EQ+A+ AAA  ++ RF V  +     E  D  + D   V  G KRK
Sbjct: 186 GAKSAKIQAQTMEQQALAAAAPMESMRFLVENIWNDSVEKADKRTTD---VKCGMKRK 240



 Score = 39.7 bits (91), Expect(2) = 2e-34
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +3

Query: 3   DLVAKVCGCLLRRGTLSLQEIVRSTEL 83
           +L AKVC CLLRRGT +L ++V STEL
Sbjct: 20  ELNAKVCDCLLRRGTQTLHQVVSSTEL 46


>gb|PIA62732.1| hypothetical protein AQUCO_00200631v1 [Aquilegia coerulea]
          Length = 526

 Score =  130 bits (328), Expect(2) = 9e-34
 Identities = 79/170 (46%), Positives = 101/170 (59%), Gaps = 7/170 (4%)
 Frame = +2

Query: 107 GAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQLLVRAT 286
           GA    T Y  +F+NI+ R+RFPKF+AIV E+L  QC  LLEGLLQH RLT +Q+++RA 
Sbjct: 76  GAVPRGTHYSVIFENIIHRMRFPKFIAIVSEELDKQCVELLEGLLQHGRLTLEQIILRAV 135

Query: 287 SKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKHSAK-----E 451
           SK  EG   ++  L+  F +LV  HYVERCP  EP      E   +  R+ SAK     E
Sbjct: 136 SKLNEGDCAVQDALRANFVKLVDAHYVERCPASEPIANLQDEGKNTSTRRRSAKSAKFAE 195

Query: 452 QTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHS--EDKLGVSVGDKRK 595
             T EQ+ M AA  S  ERF VV  TGT+     +  E+   V+VG+KRK
Sbjct: 196 VETAEQQVMTAAISS--ERFVVVTNTGTDVTSEKNTFENLSNVAVGEKRK 243



 Score = 40.8 bits (94), Expect(2) = 9e-34
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +3

Query: 6  LVAKVCGCLLRRGTLSLQEIVRSTEL 83
          LV KVC CLLR+GTL+L +IVR TEL
Sbjct: 21 LVTKVCECLLRKGTLNLPDIVRYTEL 46


>ref|XP_015080143.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Solanum
           pennellii]
          Length = 525

 Score =  132 bits (331), Expect(2) = 9e-34
 Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 6/178 (3%)
 Frame = +2

Query: 80  ALKLPAGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLT 259
           A++ P G G  AK +TQYMALFDNI+ +LRFPKF+ IV E+LG +CE +LE LLQH RL+
Sbjct: 68  AIRQPGGFGEEAKIITQYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWLLQHGRLS 127

Query: 260 FDQLLVRATSKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKH 439
             Q++V+      +G S+     Q++F RLV+  +VERCP P+P + P   E T+ A+K 
Sbjct: 128 LSQIIVKYKQASKQGDSS-ADAAQDSFNRLVNARFVERCPAPDPLLEPPAAEETA-AKKR 185

Query: 440 SAK----EQTTIEQEAMFAAAFSDAERFSV--VLGTGTEGLDVHSEDKLGVSVGDKRK 595
            AK    +  T+EQ+A+ AAA  ++ RF V  +     E  D  + D   V  G KRK
Sbjct: 186 GAKSAKIQAQTMEQQALAAAAPMESMRFLVENIWNDSVEKADKRTTD---VKCGMKRK 240



 Score = 39.7 bits (91), Expect(2) = 9e-34
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +3

Query: 3   DLVAKVCGCLLRRGTLSLQEIVRSTEL 83
           +L AKVC CLLRRGT +L ++V STEL
Sbjct: 20  ELNAKVCDCLLRRGTQTLHQVVSSTEL 46


>gb|PIA62731.1| hypothetical protein AQUCO_00200631v1 [Aquilegia coerulea]
          Length = 492

 Score =  130 bits (328), Expect(2) = 9e-34
 Identities = 79/170 (46%), Positives = 101/170 (59%), Gaps = 7/170 (4%)
 Frame = +2

Query: 107 GAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRLTFDQLLVRAT 286
           GA    T Y  +F+NI+ R+RFPKF+AIV E+L  QC  LLEGLLQH RLT +Q+++RA 
Sbjct: 76  GAVPRGTHYSVIFENIIHRMRFPKFIAIVSEELDKQCVELLEGLLQHGRLTLEQIILRAV 135

Query: 287 SKHPEGCSTIRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMARKHSAK-----E 451
           SK  EG   ++  L+  F +LV  HYVERCP  EP      E   +  R+ SAK     E
Sbjct: 136 SKLNEGDCAVQDALRANFVKLVDAHYVERCPASEPIANLQDEGKNTSTRRRSAKSAKFAE 195

Query: 452 QTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHS--EDKLGVSVGDKRK 595
             T EQ+ M AA  S  ERF VV  TGT+     +  E+   V+VG+KRK
Sbjct: 196 VETAEQQVMTAAISS--ERFVVVTNTGTDVTSEKNTFENLSNVAVGEKRK 243



 Score = 40.8 bits (94), Expect(2) = 9e-34
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +3

Query: 6  LVAKVCGCLLRRGTLSLQEIVRSTEL 83
          LV KVC CLLR+GTL+L +IVR TEL
Sbjct: 21 LVTKVCECLLRKGTLNLPDIVRYTEL 46


>gb|EEC71269.1| hypothetical protein OsI_03266 [Oryza sativa Indica Group]
          Length = 476

 Score =  131 bits (330), Expect(2) = 1e-33
 Identities = 79/177 (44%), Positives = 111/177 (62%), Gaps = 4/177 (2%)
 Frame = +2

Query: 77  RALKLPAGTGGAAKTVTQYMALFDNILRRLRFPKFLAIVREDLGLQCETLLEGLLQHVRL 256
           +A   P G G   KTVT Y+A+FDNI+ R RF KFL+I+R D+  + E LLEGLLQ+ RL
Sbjct: 65  QAFNAPRGNGD--KTVTHYLAIFDNIVHRQRFSKFLSIIRADIP-ESEALLEGLLQNGRL 121

Query: 257 TFDQLLVRATSKHPEGCST-IRSCLQNAFERLVHGHYVERCPRPEPFIAPSLEEGTSMAR 433
           TF QL+ R  SK PEG  T  R  ++  F +LV  HYVERCP+PEPF  P ++E ++ +R
Sbjct: 122 TFGQLVERTISKVPEGSITPAREEIRMNFNKLVFAHYVERCPKPEPFFDPLVDEQSTSSR 181

Query: 434 KHSAKE---QTTIEQEAMFAAAFSDAERFSVVLGTGTEGLDVHSEDKLGVSVGDKRK 595
           K + K      +I+++ + +AA SDAERFS +     +  + +   +  +S G KRK
Sbjct: 182 KRAPKTVEIALSIDKKVVNSAALSDAERFSEIPYIMEDASNANDSPRSSIS-GAKRK 237



 Score = 39.7 bits (91), Expect(2) = 1e-33
 Identities = 20/30 (66%), Positives = 21/30 (70%)
 Frame = +3

Query: 6   LVAKVCGCLLRRGTLSLQEIVRSTELLNSQ 95
           LV+KVC CLLR G L LQEIVR  EL   Q
Sbjct: 21  LVSKVCRCLLRHGALPLQEIVRRLELSPGQ 50