BLASTX nr result

ID: Cheilocostus21_contig00031981 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00031981
         (556 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018679604.1| PREDICTED: heterogeneous nuclear ribonucleop...   133   1e-32
ref|XP_018679603.1| PREDICTED: heterogeneous nuclear ribonucleop...   133   1e-32
ref|XP_008803850.1| PREDICTED: heterogeneous nuclear ribonucleop...    98   2e-20
ref|XP_010922010.1| PREDICTED: heterogeneous nuclear ribonucleop...    83   3e-15

>ref|XP_018679604.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 661

 Score =  133 bits (334), Expect = 1e-32
 Identities = 82/178 (46%), Positives = 106/178 (59%), Gaps = 8/178 (4%)
 Frame = +2

Query: 5   LDEMKRILISPNSNAKIVLSSYSNESSIQSFPSPNVANVEAAL-----GAASEWLASRPS 169
           LDEMKR L+SPN +AK  LS +++E SI+SFP PNVA VEA+       A+    AS PS
Sbjct: 413 LDEMKRTLLSPNLSAKRDLSPFAHEHSIRSFPVPNVATVEASPVSHFPRASVNLSASHPS 472

Query: 170 LSL--HDCPTTIQVNRTHSSTGHPEDRRMRLGYNNLPRHIESPDSNYSDYETTSSHGSIP 343
           LS+   D  +  Q N  +SS G   D R  LGY  LP   +S   +YS Y  TS HG+ P
Sbjct: 473 LSVPCRDSSSGFQDNTMYSSRGSSGDHRTMLGYTGLPMQSDSAYRDYSKYGVTSCHGTDP 532

Query: 344 RPYESYGSPSIFSGNTYGTSSIAFGDARRYQENNTSDAFDRFRVDRLSSS-RMLDFES 514
            PY SY   +  +GNTY  SSI +GD   YQ  NT+DAF R   D  SSS +++++E+
Sbjct: 533 LPYASYTGSNFPTGNTYDRSSIPYGDMSLYQTYNTADAFRRPSFDGFSSSAKVINYEN 590


>ref|XP_018679603.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 685

 Score =  133 bits (334), Expect = 1e-32
 Identities = 82/178 (46%), Positives = 106/178 (59%), Gaps = 8/178 (4%)
 Frame = +2

Query: 5   LDEMKRILISPNSNAKIVLSSYSNESSIQSFPSPNVANVEAAL-----GAASEWLASRPS 169
           LDEMKR L+SPN +AK  LS +++E SI+SFP PNVA VEA+       A+    AS PS
Sbjct: 437 LDEMKRTLLSPNLSAKRDLSPFAHEHSIRSFPVPNVATVEASPVSHFPRASVNLSASHPS 496

Query: 170 LSL--HDCPTTIQVNRTHSSTGHPEDRRMRLGYNNLPRHIESPDSNYSDYETTSSHGSIP 343
           LS+   D  +  Q N  +SS G   D R  LGY  LP   +S   +YS Y  TS HG+ P
Sbjct: 497 LSVPCRDSSSGFQDNTMYSSRGSSGDHRTMLGYTGLPMQSDSAYRDYSKYGVTSCHGTDP 556

Query: 344 RPYESYGSPSIFSGNTYGTSSIAFGDARRYQENNTSDAFDRFRVDRLSSS-RMLDFES 514
            PY SY   +  +GNTY  SSI +GD   YQ  NT+DAF R   D  SSS +++++E+
Sbjct: 557 LPYASYTGSNFPTGNTYDRSSIPYGDMSLYQTYNTADAFRRPSFDGFSSSAKVINYEN 614


>ref|XP_008803850.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           [Phoenix dactylifera]
 ref|XP_008803851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           [Phoenix dactylifera]
          Length = 678

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 63/170 (37%), Positives = 88/170 (51%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   LDEMKRILISPNSNAKIVLSSYSNESSIQSFPSPNVANVEAALGAASEWLASRPSLSL-- 178
           LDEMKR L SPN N K   S YS ESS+QSF +P VA+  AA      W  S+ ++ L  
Sbjct: 436 LDEMKRSLGSPNLNQKRDFSPYSRESSVQSFSTPYVADKVAATATGGHWPTSQSTVLLPG 495

Query: 179 HDCPTTIQVNRTHSSTGHPEDRRMRLGYNNLPRHIESPDSNYSDYETTSSHGSIPRPYES 358
            D   T+Q N      G     R R   +NL    +SP  + S+Y  TS HG +  PY S
Sbjct: 496 SDNLNTLQFNAAAVGLGSSGGYRPRRDNSNLLMPNDSPYESVSNYGRTSFHGDVSNPYGS 555

Query: 359 YGSPSIFSGNTYGTSSIAFGDARRYQENNTSDAFDRFRVDRLSSSRMLDF 508
           Y + + ++ NTY  +S+  G+   Y  ++  DAF R   +  SS + L++
Sbjct: 556 YVASNPYNRNTYERTSVPMGNMSPYPTHSAIDAFGRPNFEGPSSFQNLNY 605


>ref|XP_010922010.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           [Elaeis guineensis]
          Length = 674

 Score = 83.2 bits (204), Expect = 3e-15
 Identities = 56/156 (35%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
 Frame = +2

Query: 5   LDEMKRILISPNSNAKIVLSSYSNESSIQSFPSPNVANVEAALGAASEWLASRPSLSLH- 181
           LDEMKR L SP  N     S YS ESSIQSF +    +  AA      W  S+ ++ L  
Sbjct: 434 LDEMKRSLQSPYLNKNRDSSPYSCESSIQSFSTRYALDKGAATATGGHWSTSQSTVLLPG 493

Query: 182 -DCPTTIQVNRTHSSTGHPEDRRMRLGYNNLPRHIESPDSNYSDYETTSSHGSIPRPYES 358
            D   T Q N + +  G     R R   +NLP   +SP  N+S++  T  HG +  PY  
Sbjct: 494 PDSLNTRQFNASSAGLGSSGGYRPRGDNSNLPMPKDSPYENFSNHGKTLFHGDVSNPYGR 553

Query: 359 YGSPSIFSGNTYGTSSIAFGDARRYQENNTSDAFDR 466
           Y + S ++ NTY  +S+  GD      ++  DAF R
Sbjct: 554 YVASSPYNRNTYEGTSLPMGDMSPCPAHSAIDAFGR 589


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