BLASTX nr result

ID: Cheilocostus21_contig00031936 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00031936
         (575 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009396376.1| PREDICTED: pentatricopeptide repeat-containi...    41   9e-09

>ref|XP_009396376.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540
           [Musa acuminata subsp. malaccensis]
          Length = 797

 Score = 41.2 bits (95), Expect(3) = 9e-09
 Identities = 22/43 (51%), Positives = 27/43 (62%)
 Frame = +1

Query: 289 GMAERAVETFGWTPELSSRPSTFTYGTM*QIHEVLPIELRALA 417
           GMAE+AVE FG   E  SRP+TF Y T+ +I     + L ALA
Sbjct: 154 GMAEKAVEAFGRMSEFGSRPNTFAYNTLLRIFVDKDVILLALA 196



 Score = 34.3 bits (77), Expect(3) = 9e-09
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +3

Query: 21  DLAVCNCILIIRHSVPCFEPRLFYLH--FMPHMVVDILADPP 140
           +L +   +L I H+VP FEP L +L      H+V ++LAD P
Sbjct: 43  ELVISERVLTILHTVPSFEPHLDFLSPILTHHVVEEVLADAP 84



 Score = 31.2 bits (69), Expect(3) = 9e-09
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +2

Query: 185 RSAGGFVATWRAFEELRLWGLSVAP---GLMLSGYAA 286
           RS GGF + WRA  +L   G+ VAP     ++S Y+A
Sbjct: 116 RSPGGFDSAWRALADLGRQGVPVAPAAFAALISAYSA 152


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