BLASTX nr result
ID: Cheilocostus21_contig00031708
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00031708
(1203 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009420633.1| hypothetical chloroplast RF19 (chloroplast) ... 52 5e-08
ref|YP_009420619.1| hypothetical chloroplast RF19 (chloroplast) ... 52 5e-08
ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma rosco... 52 9e-08
gb|AGE93428.1| hypothetical chloroplast RF19 (plastid) [Alpinia ... 52 9e-08
ref|YP_009429027.1| hypothetical chloroplast RF19 (chloroplast) ... 52 9e-08
ref|YP_009462858.1| Ycf1 (chloroplast) [Amomum compactum] >gi|13... 52 9e-08
ref|YP_009459099.1| Ycf1 (chloroplast) [Amomum krervanh] >gi|133... 52 9e-08
ref|YP_009459111.1| Ycf1 (chloroplast) [Amomum krervanh] >gi|133... 52 9e-08
ref|YP_009462870.1| Ycf1 (chloroplast) [Amomum compactum] >gi|13... 52 9e-08
ref|YP_009429039.1| putative hypothetical chloroplast RF19 (chlo... 52 9e-08
ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spec... 52 1e-07
ref|YP_009193020.1| hypothetical chloroplast RF19 (chloroplast) ... 52 1e-07
gb|AEX94009.1| hypothetical chloroplast RF19 (chloroplast) [Aspa... 45 4e-06
ref|YP_009432783.1| hypothetical protein ycf1 (chloroplast) [Mil... 47 6e-06
ref|YP_009092727.1| hypothetical protein ycf1 [Eustrephus latifo... 46 7e-06
gb|AEX94030.1| hypothetical chloroplast RF19 (chloroplast) [Ophi... 45 7e-06
>ref|YP_009420633.1| hypothetical chloroplast RF19 (chloroplast) [Musa itinerans]
gb|ASO76321.1| hypothetical chloroplast RF19 (chloroplast) [Musa itinerans]
Length = 1911
Score = 51.6 bits (122), Expect(2) = 5e-08
Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 5/43 (11%)
Frame = -2
Query: 170 ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ*KNY 57
IS+ LDI +K TRLCNDE++QEYLPKA NGPY G K +
Sbjct: 494 ISLALDILEKRTRLCNDENEQEYLPKAYDPFLNGPYRGTIKKF 536
Score = 35.4 bits (80), Expect(2) = 5e-08
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IKTLE+
Sbjct: 466 QKKYNLSNELISRIKTLEE 484
>ref|YP_009420619.1| hypothetical chloroplast RF19 (chloroplast) [Musa itinerans]
gb|ASO76307.1| hypothetical chloroplast RF19 (chloroplast) [Musa itinerans]
Length = 1663
Score = 51.6 bits (122), Expect(2) = 5e-08
Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 5/43 (11%)
Frame = -2
Query: 170 ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ*KNY 57
IS+ LDI +K TRLCNDE++QEYLPKA NGPY G K +
Sbjct: 494 ISLALDILEKRTRLCNDENEQEYLPKAYDPFLNGPYRGTIKKF 536
Score = 35.4 bits (80), Expect(2) = 5e-08
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IKTLE+
Sbjct: 466 QKKYNLSNELISRIKTLEE 484
>ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma roscoeana]
gb|AHA13154.1| hypothetical chloroplast RF19 (plastid) [Curcuma roscoeana]
Length = 1815
Score = 51.6 bits (122), Expect(2) = 9e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ 69
K+ +S+TLDI +K TRLCNDE+KQEYLPKA NG Y G+
Sbjct: 419 KEKVSLTLDILEKRTRLCNDENKQEYLPKAYDPLLNGAYRGK 460
Score = 34.7 bits (78), Expect(2) = 9e-08
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK LEK
Sbjct: 401 QKKYNLSNELISRIKILEK 419
>gb|AGE93428.1| hypothetical chloroplast RF19 (plastid) [Alpinia zerumbet]
Length = 1795
Score = 51.6 bits (122), Expect(2) = 9e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ 69
K+ +S+TLDI +K TRLCNDE+KQEYLPKA NG Y G+
Sbjct: 419 KEKVSLTLDILEKRTRLCNDENKQEYLPKAYDPLLNGAYRGK 460
Score = 34.7 bits (78), Expect(2) = 9e-08
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK LEK
Sbjct: 401 QKKYNLSNELISRIKILEK 419
>ref|YP_009429027.1| hypothetical chloroplast RF19 (chloroplast) [Alpinia oxyphylla]
gb|ASW20489.1| hypothetical chloroplast RF19 (chloroplast) [Alpinia oxyphylla]
Length = 1793
Score = 51.6 bits (122), Expect(2) = 9e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ 69
K+ +S+TLDI +K TRLCNDE+KQEYLPKA NG Y G+
Sbjct: 419 KEKVSLTLDILEKRTRLCNDENKQEYLPKAYDPLLNGAYRGK 460
Score = 34.7 bits (78), Expect(2) = 9e-08
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK LEK
Sbjct: 401 QKKYNLSNELISRIKILEK 419
>ref|YP_009462858.1| Ycf1 (chloroplast) [Amomum compactum]
gb|AUW35061.1| Ycf1 (chloroplast) [Amomum compactum]
Length = 1313
Score = 51.6 bits (122), Expect(2) = 9e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ 69
K+ +S+TLDI +K TRLCNDE+KQEYLPKA NG Y G+
Sbjct: 419 KEKVSLTLDILEKRTRLCNDENKQEYLPKAYDPLLNGAYRGK 460
Score = 34.7 bits (78), Expect(2) = 9e-08
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK LEK
Sbjct: 401 QKKYNLSNELISRIKILEK 419
>ref|YP_009459099.1| Ycf1 (chloroplast) [Amomum krervanh]
gb|AUS84029.1| Ycf1 (chloroplast) [Amomum krervanh]
Length = 1303
Score = 51.6 bits (122), Expect(2) = 9e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ 69
K+ +S+TLDI +K TRLCNDE+KQEYLPKA NG Y G+
Sbjct: 419 KEKVSLTLDILEKRTRLCNDENKQEYLPKAYDPLLNGAYRGK 460
Score = 34.7 bits (78), Expect(2) = 9e-08
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK LEK
Sbjct: 401 QKKYNLSNELISRIKILEK 419
>ref|YP_009459111.1| Ycf1 (chloroplast) [Amomum krervanh]
gb|AUS84030.1| Ycf1 (chloroplast) [Amomum krervanh]
Length = 1244
Score = 51.6 bits (122), Expect(2) = 9e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ 69
K+ +S+TLDI +K TRLCNDE+KQEYLPKA NG Y G+
Sbjct: 419 KEKVSLTLDILEKRTRLCNDENKQEYLPKAYDPLLNGAYRGK 460
Score = 34.7 bits (78), Expect(2) = 9e-08
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK LEK
Sbjct: 401 QKKYNLSNELISRIKILEK 419
>ref|YP_009462870.1| Ycf1 (chloroplast) [Amomum compactum]
gb|AUW35062.1| Ycf1 (chloroplast) [Amomum compactum]
Length = 1212
Score = 51.6 bits (122), Expect(2) = 9e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ 69
K+ +S+TLDI +K TRLCNDE+KQEYLPKA NG Y G+
Sbjct: 183 KEKVSLTLDILEKRTRLCNDENKQEYLPKAYDPLLNGAYRGK 224
Score = 34.7 bits (78), Expect(2) = 9e-08
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK LEK
Sbjct: 165 QKKYNLSNELISRIKILEK 183
>ref|YP_009429039.1| putative hypothetical chloroplast RF19 (chloroplast) [Alpinia
oxyphylla]
gb|ASW20501.1| putative hypothetical chloroplast RF19 (chloroplast) [Alpinia
oxyphylla]
Length = 1006
Score = 51.6 bits (122), Expect(2) = 9e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ 69
K+ +S+TLDI +K TRLCNDE+KQEYLPKA NG Y G+
Sbjct: 419 KEKVSLTLDILEKRTRLCNDENKQEYLPKAYDPLLNGAYRGK 460
Score = 34.7 bits (78), Expect(2) = 9e-08
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK LEK
Sbjct: 401 QKKYNLSNELISRIKILEK 419
>ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spectabile]
gb|AGE92827.1| hypothetical chloroplast RF19 (plastid) [Zingiber spectabile]
Length = 1817
Score = 51.6 bits (122), Expect(2) = 1e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ 69
K+ +S+TLDI +K TRLCNDE+KQEYLPKA NG Y G+
Sbjct: 421 KEKVSLTLDILEKRTRLCNDENKQEYLPKAYDPLLNGAYRGK 462
Score = 33.9 bits (76), Expect(2) = 1e-07
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK +EK
Sbjct: 403 QKKYNLSNELISRIKIIEK 421
>ref|YP_009193020.1| hypothetical chloroplast RF19 (chloroplast) [Curcuma flaviflora]
gb|ALP83604.1| hypothetical chloroplast RF19 (chloroplast) [Curcuma flaviflora]
Length = 1815
Score = 51.6 bits (122), Expect(2) = 1e-07
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPKA-----NGPYCGQ 69
K+ +S+TLDI +K TRLCNDE+KQEYLPKA NG Y G+
Sbjct: 419 KEKVSLTLDILEKRTRLCNDENKQEYLPKAYDPLLNGAYRGK 460
Score = 33.9 bits (76), Expect(2) = 1e-07
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK +EK
Sbjct: 401 QKKYNLSNELISRIKIIEK 419
>gb|AEX94009.1| hypothetical chloroplast RF19 (chloroplast) [Asparagus
asparagoides]
Length = 1808
Score = 44.7 bits (104), Expect(2) = 4e-06
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 5/42 (11%)
Frame = -2
Query: 167 SITLDIFKKWTRLCNDESKQEYLPK-----ANGPYCGQ*KNY 57
S+ LD+ +K TRLC+DE++++YLPK NGPY G KN+
Sbjct: 420 SLALDMLEKRTRLCDDENEEKYLPKRYDPFLNGPYRGTIKNF 461
Score = 35.8 bits (81), Expect(2) = 4e-06
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNL+NELIS+IKTLEK
Sbjct: 398 QKKYNLNNELISRIKTLEK 416
>ref|YP_009432783.1| hypothetical protein ycf1 (chloroplast) [Milla biflora]
gb|ATB19039.1| hypothetical protein ycf1 (chloroplast) [Milla biflora]
Length = 1828
Score = 47.4 bits (111), Expect(2) = 6e-06
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 5/46 (10%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPK-----ANGPYCGQ*KNY 57
K+ +S+ LD+ +K TRLCNDE++QEYLP+ NGPY G K +
Sbjct: 423 KEKVSLALDMLEKRTRLCNDENEQEYLPQMYDPFLNGPYRGTIKKF 468
Score = 32.7 bits (73), Expect(2) = 6e-06
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNL+NELIS+IK +EK
Sbjct: 405 QKKYNLNNELISRIKIIEK 423
>ref|YP_009092727.1| hypothetical protein ycf1 [Eustrephus latifolius]
ref|YP_009092739.1| hypothetical protein ycf1 [Eustrephus latifolius]
gb|AIR12578.1| hypothetical protein ycf1 (plastid) [Eustrephus latifolius]
gb|AIR12579.1| hypothetical protein ycf1 (plastid) [Eustrephus latifolius]
Length = 1777
Score = 46.2 bits (108), Expect(2) = 7e-06
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Frame = -2
Query: 179 KK*ISITLDIFKKWTRLCNDESKQEYLPK-----ANGPYCGQ*KN 60
KK S+TLDI +K TRLC D++++EYLPK NGPY G KN
Sbjct: 434 KKKGSLTLDILEKKTRLCLDQNRKEYLPKRYDPLLNGPYRGTIKN 478
Score = 33.5 bits (75), Expect(2) = 7e-06
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -1
Query: 234 NKKKYNLSNELISQIKTLEK 175
++KKYNL NELIS+IK LEK
Sbjct: 415 DQKKYNLKNELISRIKILEK 434
>gb|AEX94030.1| hypothetical chloroplast RF19 (chloroplast) [Ophiopogon japonicus]
Length = 1741
Score = 45.1 bits (105), Expect(2) = 7e-06
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 5/42 (11%)
Frame = -2
Query: 167 SITLDIFKKWTRLCNDESKQEYLPK-----ANGPYCGQ*KNY 57
S+ LD+ +K TRLC+DE++QEYLPK NGPY G K +
Sbjct: 418 SLALDMLEKRTRLCDDENEQEYLPKRYDPFLNGPYRGTIKKF 459
Score = 34.7 bits (78), Expect(2) = 7e-06
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -1
Query: 231 KKKYNLSNELISQIKTLEK 175
+KKYNLSNELIS+IK LEK
Sbjct: 396 QKKYNLSNELISRIKILEK 414