BLASTX nr result

ID: Cheilocostus21_contig00031623 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00031623
         (545 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009418138.1| PREDICTED: eukaryotic translation initiation...    58   5e-07
ref|XP_009418137.1| PREDICTED: eukaryotic translation initiation...    58   8e-07

>ref|XP_009418138.1| PREDICTED: eukaryotic translation initiation factor 3 subunit J
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 186

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 38/78 (48%), Positives = 41/78 (52%)
 Frame = -2

Query: 499 LKAVLRLSMTSLKAADAKEIASSVTAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 320
           LK V+RLSMTSLKAADAKE+ASSVTAI                                D
Sbjct: 111 LKDVIRLSMTSLKAADAKEVASSVTAIANEKLKAEKEANAGKKKQGTKKKQLHVDKAEDD 170

Query: 319 YSAATAGRYDDGDEYDFM 266
           Y   TAGRYDD D+YDFM
Sbjct: 171 Y--GTAGRYDDMDDYDFM 186


>ref|XP_009418137.1| PREDICTED: eukaryotic translation initiation factor 3 subunit J
           isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 227

 Score = 57.8 bits (138), Expect = 8e-07
 Identities = 38/78 (48%), Positives = 41/78 (52%)
 Frame = -2

Query: 499 LKAVLRLSMTSLKAADAKEIASSVTAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 320
           LK V+RLSMTSLKAADAKE+ASSVTAI                                D
Sbjct: 152 LKDVIRLSMTSLKAADAKEVASSVTAIANEKLKAEKEANAGKKKQGTKKKQLHVDKAEDD 211

Query: 319 YSAATAGRYDDGDEYDFM 266
           Y   TAGRYDD D+YDFM
Sbjct: 212 Y--GTAGRYDDMDDYDFM 227


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