BLASTX nr result

ID: Cheilocostus21_contig00031498 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00031498
         (664 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO58810.1| hypothetical protein CCACVL1_25343 [Corchorus cap...    58   2e-06

>gb|OMO58810.1| hypothetical protein CCACVL1_25343 [Corchorus capsularis]
          Length = 287

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/105 (37%), Positives = 56/105 (53%)
 Frame = +1

Query: 1   ANPQMKKWRSTPINNYDKLEELFSKDRATGSIAVTCQDYINLCNNQIEEEDHDLFNEEAF 180
           ANP  K+W STP N+YDKL +LF++D+ATG  A + ++ +    N+ +    D F+  A 
Sbjct: 86  ANPDAKRWMSTPFNHYDKLFDLFAQDKATGEGATSAKEKMFQWANEEDGNRIDDFSTFAP 145

Query: 181 GNFSTAQIPLINEDVDGSGPTSPAVMSSFKSASEPSRSSKCNKRK 315
            N S+ ++ L   D D + P      S   S  E   SSK  KRK
Sbjct: 146 SN-SSCELQL---DEDSTSPVH--ATSKVNSEVEVEASSKSKKRK 184


Top