BLASTX nr result

ID: Cheilocostus21_contig00031394 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00031394
         (443 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009412137.1| PREDICTED: F-box protein At5g49610 [Musa acu...    77   1e-13
ref|XP_019708708.1| PREDICTED: F-box protein At5g49610 [Elaeis g...    60   8e-08
ref|XP_008806720.1| PREDICTED: F-box protein At5g49610 isoform X...    58   7e-07

>ref|XP_009412137.1| PREDICTED: F-box protein At5g49610 [Musa acuminata subsp.
           malaccensis]
 ref|XP_018686518.1| PREDICTED: F-box protein At5g49610 [Musa acuminata subsp.
           malaccensis]
          Length = 360

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
 Frame = -3

Query: 426 KISLQDEAQMVTSGSRVYLLELRGSVSLDQTAGIYIST*ILNNHS----------HYATF 277
           KI L DE     SGSRVYLLEL GSVS+ Q  G+++S  +L NH           H    
Sbjct: 236 KILLPDEVLTTRSGSRVYLLELEGSVSVVQITGVWMSIWVLRNHDTEQWTLVDRVHLRCI 295

Query: 276 GRYSASSMN*CLFCNHISLSQSTDVVSLGTQKKIRVYNLAVDFPKV*NGYSLWHTHCVYF 97
             ++AS            +SQS DV  + TQKKI +YNL     K   G +   T+ ++F
Sbjct: 296 SAFAASI---------FPVSQSRDVAFMATQKKILIYNLKGKVWKEVYGANGTVTYPLWF 346

Query: 96  SAYGYRSPPFLSHI 55
           S+YG+RS  F  H+
Sbjct: 347 SSYGFRSTLFPCHL 360


>ref|XP_019708708.1| PREDICTED: F-box protein At5g49610 [Elaeis guineensis]
          Length = 364

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
 Frame = -3

Query: 426 KISLQDEAQMVTSGSRVYLLELRGSVSLDQTAGIYIST*ILNNHS----------HYATF 277
           KI L DE  +  +GSR+YLLEL G VS+ Q +G+++S  +L +H           H    
Sbjct: 240 KIWLPDEVLLSRNGSRIYLLELDGLVSVVQISGVWMSVWVLRDHGTEQWSLVDKVHLRCI 299

Query: 276 GRYSASSMN*CLFCNHISLSQSTDVVSLGTQKKIRVYNLAVDFPKV*NGYSLWHTHCVYF 97
             Y+AS    C         QS DV+ + TQKK+ +Y+      K  +G     T+ ++F
Sbjct: 300 NGYTASVFPIC---------QSRDVIFMATQKKVLMYDRNGKMWKEIHGVRGASTYPLWF 350

Query: 96  SAYGYRSPPF 67
            +Y ++S  F
Sbjct: 351 LSYAFKSSLF 360


>ref|XP_008806720.1| PREDICTED: F-box protein At5g49610 isoform X1 [Phoenix dactylifera]
          Length = 364

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
 Frame = -3

Query: 426 KISLQDEAQMVTSGSRVYLLELRGSVSLDQTAGIYIST*ILNNHS----------HYATF 277
           KI L DE  +   GSR+YLLEL G VS+ Q +G+++S  +L +H           H    
Sbjct: 240 KIWLPDEVLLTRYGSRIYLLELEGLVSVVQISGVWMSVWVLRDHGTDQWSLVDKVHLRCI 299

Query: 276 GRYSASSMN*CLFCNHISLSQSTDVVSLGTQKKIRVYNLAVDFPKV*NGYSLWHTHCVYF 97
             Y+AS    C         QS D + + TQKK+ VY+ +    K         T+ ++F
Sbjct: 300 NGYTASVFPIC---------QSRDAIFMATQKKVLVYDRSGKVWKEVYAVRGASTYPLWF 350

Query: 96  SAYGYRSPPF 67
            +Y ++S  F
Sbjct: 351 FSYAFKSSLF 360


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