BLASTX nr result
ID: Cheilocostus21_contig00031309
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00031309
(441 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009412426.1| PREDICTED: splicing factor, suppressor of wh... 60 4e-11
ref|XP_009412428.1| PREDICTED: splicing factor, suppressor of wh... 60 4e-11
ref|XP_009412429.1| PREDICTED: splicing factor, suppressor of wh... 60 4e-11
ref|XP_010923405.1| PREDICTED: splicing factor, suppressor of wh... 49 2e-07
ref|XP_020098955.1| splicing factor, suppressor of white-apricot... 49 2e-07
gb|OAY78714.1| hypothetical protein ACMD2_02149 [Ananas comosus] 49 5e-07
gb|OAY78743.1| Protein suppressor of white apricot [Ananas comosus] 49 6e-07
ref|XP_010923396.1| PREDICTED: splicing factor, suppressor of wh... 49 1e-06
ref|XP_010923413.1| PREDICTED: splicing factor, suppressor of wh... 49 1e-06
>ref|XP_009412426.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 860
Score = 59.7 bits (143), Expect(2) = 4e-11
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 65 SALASGLYSRRVRDGNASL*GSIEQQCSSQAGASG-KLIILQPRIILENNDKKIVEFITR 241
S L +G Y + RDGN L G +EQ SS +G S K ++L+P L+ KIVEFI R
Sbjct: 326 STLVNGPYGKNARDGNPILPGLVEQPRSSVSGRSDVKSVLLEPPSFLKRMIDKIVEFILR 385
Query: 242 NVMQFDAVLIEQ 277
N +F+AVLIEQ
Sbjct: 386 NGKEFEAVLIEQ 397
Score = 35.4 bits (80), Expect(2) = 4e-11
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 283 SVGRSPFLLPFNPYCSYNLRVLEGGFQ 363
+VGR PFLLP N Y Y L+VLEG Q
Sbjct: 400 TVGRFPFLLPSNQYHPYYLKVLEGARQ 426
>ref|XP_009412428.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 795
Score = 59.7 bits (143), Expect(2) = 4e-11
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 65 SALASGLYSRRVRDGNASL*GSIEQQCSSQAGASG-KLIILQPRIILENNDKKIVEFITR 241
S L +G Y + RDGN L G +EQ SS +G S K ++L+P L+ KIVEFI R
Sbjct: 261 STLVNGPYGKNARDGNPILPGLVEQPRSSVSGRSDVKSVLLEPPSFLKRMIDKIVEFILR 320
Query: 242 NVMQFDAVLIEQ 277
N +F+AVLIEQ
Sbjct: 321 NGKEFEAVLIEQ 332
Score = 35.4 bits (80), Expect(2) = 4e-11
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 283 SVGRSPFLLPFNPYCSYNLRVLEGGFQ 363
+VGR PFLLP N Y Y L+VLEG Q
Sbjct: 335 TVGRFPFLLPSNQYHPYYLKVLEGARQ 361
>ref|XP_009412429.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
isoform X3 [Musa acuminata subsp. malaccensis]
Length = 778
Score = 59.7 bits (143), Expect(2) = 4e-11
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 65 SALASGLYSRRVRDGNASL*GSIEQQCSSQAGASG-KLIILQPRIILENNDKKIVEFITR 241
S L +G Y + RDGN L G +EQ SS +G S K ++L+P L+ KIVEFI R
Sbjct: 244 STLVNGPYGKNARDGNPILPGLVEQPRSSVSGRSDVKSVLLEPPSFLKRMIDKIVEFILR 303
Query: 242 NVMQFDAVLIEQ 277
N +F+AVLIEQ
Sbjct: 304 NGKEFEAVLIEQ 315
Score = 35.4 bits (80), Expect(2) = 4e-11
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 283 SVGRSPFLLPFNPYCSYNLRVLEGGFQ 363
+VGR PFLLP N Y Y L+VLEG Q
Sbjct: 318 TVGRFPFLLPSNQYHPYYLKVLEGARQ 344
>ref|XP_010923405.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
isoform X2 [Elaeis guineensis]
Length = 879
Score = 48.9 bits (115), Expect(2) = 2e-07
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 65 SALASGLYSRRVRDGNASL*GSIEQQCSSQAGASG-KLIILQPRIILENNDKKIVEFITR 241
+A+ + S++V D + G++ + +SQ G S K +IL+P L+ +KIVEFI R
Sbjct: 334 AAIVNAALSKKVGDSSLLRSGAMNKPQNSQPGISNAKPVILEPPTFLKRMMEKIVEFILR 393
Query: 242 NVMQFDAVLIEQ 277
N +F+AVLIEQ
Sbjct: 394 NGKEFEAVLIEQ 405
Score = 33.5 bits (75), Expect(2) = 2e-07
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Frame = +1
Query: 289 GRSPFLLPFNPYCSYNLRVLE------GGFQELIQ 375
GR PFLLP N Y SY L++L+ GGF++ +Q
Sbjct: 410 GRFPFLLPSNQYHSYYLKLLQEAREGPGGFKKKVQ 444
>ref|XP_020098955.1| splicing factor, suppressor of white-apricot homolog [Ananas
comosus]
Length = 855
Score = 48.5 bits (114), Expect(2) = 2e-07
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 89 SRRVRDGNASL*GSIEQQCSSQAGASG-KLIILQPRIILENNDKKIVEFITRNVMQFDAV 265
S++V+DG + S+++ S Q+G S K +IL+P ++ +KIVEFI RN +F+AV
Sbjct: 346 SKKVKDGVGQVPSSVDKLHSLQSGVSDRKPLILEPPSSIKRMMEKIVEFILRNGKEFEAV 405
Query: 266 LIEQ 277
LIEQ
Sbjct: 406 LIEQ 409
Score = 33.9 bits (76), Expect(2) = 2e-07
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +1
Query: 283 SVGRSPFLLPFNPYCSYNLRVLEGGFQELIQRQVETDREL 402
++GR PFLLP + Y SY L++LE + + + +D++L
Sbjct: 412 TIGRFPFLLPSHQYHSYYLKILEEAREAKLHGKSSSDQKL 451
>gb|OAY78714.1| hypothetical protein ACMD2_02149 [Ananas comosus]
Length = 655
Score = 48.5 bits (114), Expect(2) = 5e-07
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 89 SRRVRDGNASL*GSIEQQCSSQAGASG-KLIILQPRIILENNDKKIVEFITRNVMQFDAV 265
S++V+DG + S+++ S Q+G S K +IL+P ++ +KIVEFI RN +F+AV
Sbjct: 135 SKKVKDGVGQVPSSVDKLHSLQSGVSDRKPLILEPPSSIKRMMEKIVEFILRNGKEFEAV 194
Query: 266 LIEQ 277
LIEQ
Sbjct: 195 LIEQ 198
Score = 32.7 bits (73), Expect(2) = 5e-07
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 283 SVGRSPFLLPFNPYCSYNLRVLEGGFQELIQRQVE 387
++GR PFLLP + Y SY L++LE + +I + E
Sbjct: 201 TIGRFPFLLPSHQYHSYYLKILEEAREIVIPEKYE 235
>gb|OAY78743.1| Protein suppressor of white apricot [Ananas comosus]
Length = 853
Score = 48.5 bits (114), Expect(2) = 6e-07
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 89 SRRVRDGNASL*GSIEQQCSSQAGASG-KLIILQPRIILENNDKKIVEFITRNVMQFDAV 265
S++V+DG + S+++ S Q+G S K +IL+P ++ +KIVEFI RN +F+AV
Sbjct: 343 SKKVKDGVGQVPSSVDKLHSLQSGVSDIKPLILEPPSSIKRMMEKIVEFILRNGKEFEAV 402
Query: 266 LIEQ 277
LIEQ
Sbjct: 403 LIEQ 406
Score = 32.3 bits (72), Expect(2) = 6e-07
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 283 SVGRSPFLLPFNPYCSYNLRVLEGGFQELIQRQVETDRE 399
++GR PFLLP + Y SY L++LE + + + +D++
Sbjct: 409 TIGRFPFLLPSHQYHSYYLKILEEAREAKLHGKSSSDQK 447
>ref|XP_010923396.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
isoform X1 [Elaeis guineensis]
Length = 894
Score = 48.9 bits (115), Expect(2) = 1e-06
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 65 SALASGLYSRRVRDGNASL*GSIEQQCSSQAGASG-KLIILQPRIILENNDKKIVEFITR 241
+A+ + S++V D + G++ + +SQ G S K +IL+P L+ +KIVEFI R
Sbjct: 334 AAIVNAALSKKVGDSSLLRSGAMNKPQNSQPGISNAKPVILEPPTFLKRMMEKIVEFILR 393
Query: 242 NVMQFDAVLIEQ 277
N +F+AVLIEQ
Sbjct: 394 NGKEFEAVLIEQ 405
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 289 GRSPFLLPFNPYCSYNLRVL-EGGFQELIQRQVETDRELSRP 411
GR PFLLP N Y SY L++L E +L+ R + + P
Sbjct: 410 GRFPFLLPSNQYHSYYLKLLQEARESKLLSRNSDQKNDAQGP 451
>ref|XP_010923413.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
isoform X3 [Elaeis guineensis]
ref|XP_019709047.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
isoform X3 [Elaeis guineensis]
ref|XP_019709049.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
isoform X3 [Elaeis guineensis]
ref|XP_019709051.1| PREDICTED: splicing factor, suppressor of white-apricot homolog
isoform X3 [Elaeis guineensis]
Length = 741
Score = 48.9 bits (115), Expect(2) = 1e-06
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 65 SALASGLYSRRVRDGNASL*GSIEQQCSSQAGASG-KLIILQPRIILENNDKKIVEFITR 241
+A+ + S++V D + G++ + +SQ G S K +IL+P L+ +KIVEFI R
Sbjct: 181 AAIVNAALSKKVGDSSLLRSGAMNKPQNSQPGISNAKPVILEPPTFLKRMMEKIVEFILR 240
Query: 242 NVMQFDAVLIEQ 277
N +F+AVLIEQ
Sbjct: 241 NGKEFEAVLIEQ 252
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 289 GRSPFLLPFNPYCSYNLRVL-EGGFQELIQRQVETDRELSRP 411
GR PFLLP N Y SY L++L E +L+ R + + P
Sbjct: 257 GRFPFLLPSNQYHSYYLKLLQEARESKLLSRNSDQKNDAQGP 298