BLASTX nr result

ID: Cheilocostus21_contig00031208 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00031208
         (485 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009411821.1| PREDICTED: U11/U12 small nuclear ribonucleop...    57   1e-06

>ref|XP_009411821.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
           [Musa acuminata subsp. malaccensis]
          Length = 276

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1   RDKEESSHRRNRRSVERDESPRKH--QKHQEHLRQHKRRSTN 120
           RDKEE +HRR+RRS +RD+S  KH   KH+EH  QHK+RST+
Sbjct: 227 RDKEEPAHRRHRRSADRDDSSHKHHKHKHREHSHQHKKRSTS 268


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