BLASTX nr result

ID: Cheilocostus21_contig00031022 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00031022
         (677 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009419742.1| PREDICTED: serine/arginine repetitive matrix...    79   3e-13
ref|XP_008803113.1| PREDICTED: serine/arginine repetitive matrix...    60   1e-06
ref|XP_008803112.1| PREDICTED: serine/arginine repetitive matrix...    60   1e-06

>ref|XP_009419742.1| PREDICTED: serine/arginine repetitive matrix protein 1 [Musa
            acuminata subsp. malaccensis]
          Length = 838

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 64/171 (37%), Positives = 80/171 (46%), Gaps = 46/171 (26%)
 Frame = -1

Query: 674  IRERAYHKTDPSSKKGTDG---------QPSNVSSDEEIGHKIDMD----LPKRHAQVPG 534
            +RE AY +TD SSKKG D               S +E   + +++D       RH+ + G
Sbjct: 533  VREDAYCRTDSSSKKGRDSAADMKKKRFHAKKFSQEEFSNNGLEVDHSPSNQDRHSNM-G 591

Query: 533  SLNDR-------EYGAGRVHGEKNS--VDYSRQQFFH----------------------- 450
              N         EYG  RV GEK+S  V Y RQ                           
Sbjct: 592  IKNKETVRKSYTEYGPERVQGEKHSMEVSYDRQHSTKITVQVASASVVSNELVLKSSRAD 651

Query: 449  -SASDVELQPDSRNDAYRDSHYLPESVKKSKRKMDTGSQVDNFHSDSEETD 300
             S SD E +  SR+DA R+SHY  ESVKKS+RKMDT SQ  + HSDSEET+
Sbjct: 652  LSVSDAEKRAKSRSDACRESHYETESVKKSERKMDTSSQAHSNHSDSEETN 702


>ref|XP_008803113.1| PREDICTED: serine/arginine repetitive matrix protein 1-like isoform
            X2 [Phoenix dactylifera]
          Length = 875

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 58/191 (30%), Positives = 79/191 (41%), Gaps = 65/191 (34%)
 Frame = -1

Query: 677  HIRERAYHKTDPSSKKGTDGQPSNV---------------SSD----------------- 594
            H RE AYH+ D SS K + G P+NV               SSD                 
Sbjct: 545  HAREDAYHRVD-SSCKNSRGSPANVQQKDFHAKVFGPEEYSSDRLADDCSPVSQGRAVSL 603

Query: 593  ----EEIGHKIDMDLPKRHAQ-VPGSLNDREYGAGRVHGEKNSVD--YSRQQFFHS---- 447
                ++   K + DLP+RH Q V  S  + EYG GR+  E  + D  Y R+Q        
Sbjct: 604  ENRKKDYEKKSEEDLPERHKQLVSQSPEEIEYGPGRIVDESYAPDNAYDREQSSKEHARD 663

Query: 446  ----------------------ASDVELQPDSRNDAYRDSHYLPESVKKSKRKMDTGSQV 333
                                  A   E Q  ++++ YR+SHY  ESVKKS++K+   + +
Sbjct: 664  ASSSEKRVSDEQAVKNPYGDGYAVKAERQSHAKSNEYRESHYDIESVKKSRKKVVRSNCL 723

Query: 332  DNFHSDSEETD 300
            D    DSEETD
Sbjct: 724  DIHDLDSEETD 734


>ref|XP_008803112.1| PREDICTED: serine/arginine repetitive matrix protein 1-like isoform
            X1 [Phoenix dactylifera]
          Length = 896

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 58/191 (30%), Positives = 79/191 (41%), Gaps = 65/191 (34%)
 Frame = -1

Query: 677  HIRERAYHKTDPSSKKGTDGQPSNV---------------SSD----------------- 594
            H RE AYH+ D SS K + G P+NV               SSD                 
Sbjct: 566  HAREDAYHRVD-SSCKNSRGSPANVQQKDFHAKVFGPEEYSSDRLADDCSPVSQGRAVSL 624

Query: 593  ----EEIGHKIDMDLPKRHAQ-VPGSLNDREYGAGRVHGEKNSVD--YSRQQFFHS---- 447
                ++   K + DLP+RH Q V  S  + EYG GR+  E  + D  Y R+Q        
Sbjct: 625  ENRKKDYEKKSEEDLPERHKQLVSQSPEEIEYGPGRIVDESYAPDNAYDREQSSKEHARD 684

Query: 446  ----------------------ASDVELQPDSRNDAYRDSHYLPESVKKSKRKMDTGSQV 333
                                  A   E Q  ++++ YR+SHY  ESVKKS++K+   + +
Sbjct: 685  ASSSEKRVSDEQAVKNPYGDGYAVKAERQSHAKSNEYRESHYDIESVKKSRKKVVRSNCL 744

Query: 332  DNFHSDSEETD 300
            D    DSEETD
Sbjct: 745  DIHDLDSEETD 755


Top