BLASTX nr result

ID: Cheilocostus21_contig00030949 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00030949
         (2105 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018685811.1| PREDICTED: CRM-domain containing factor CFM3...   411   e-127
ref|XP_009412926.1| PREDICTED: CRM-domain containing factor CFM3...   411   e-127
ref|XP_018685812.1| PREDICTED: CRM-domain containing factor CFM3...   303   5e-88
ref|XP_010912991.1| PREDICTED: CRM-domain containing factor CFM3...   271   8e-75
ref|XP_008797776.1| PREDICTED: CRM-domain containing factor CFM3...   261   2e-71
ref|XP_015612635.1| PREDICTED: chloroplastic group IIA intron sp...   219   8e-57
gb|EAY94887.1| hypothetical protein OsI_16687 [Oryza sativa Indi...   218   1e-56
ref|XP_020259135.1| CRM-domain containing factor CFM3, chloropla...   204   7e-52
gb|PAN12088.1| hypothetical protein PAHAL_B02499 [Panicum hallii...   192   1e-47
ref|XP_010242233.1| PREDICTED: CRM-domain containing factor CFM3...   179   2e-43
gb|KDO48176.1| hypothetical protein CISIN_1g003573mg [Citrus sin...   164   9e-39
gb|KDO48175.1| hypothetical protein CISIN_1g003573mg [Citrus sin...   164   9e-39
gb|KDO48172.1| hypothetical protein CISIN_1g003573mg [Citrus sin...   164   1e-38
ref|XP_006451488.1| CRM-domain containing factor CFM3, chloropla...   164   1e-38
ref|XP_006475466.2| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   164   1e-38
ref|XP_010047561.1| PREDICTED: CRM-domain containing factor CFM3...   164   1e-38
gb|PPS19703.1| hypothetical protein GOBAR_AA00880 [Gossypium bar...   159   6e-37
ref|XP_010696507.1| PREDICTED: CRM-domain containing factor CFM3...   159   7e-37
ref|XP_021747047.1| CRM-domain containing factor CFM3, chloropla...   159   8e-37
ref|XP_016666919.1| PREDICTED: CRM-domain containing factor CFM3...   159   1e-36

>ref|XP_018685811.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial isoform X2 [Musa acuminata
            subsp. malaccensis]
          Length = 959

 Score =  411 bits (1056), Expect = e-127
 Identities = 292/658 (44%), Positives = 358/658 (54%), Gaps = 50/658 (7%)
 Frame = +1

Query: 211  DIDTVREKAKNRKPRPSFDAQTLKRWSAKFSSQRSSFPWQDQKIQTFKDFVSLHTSV--- 381
            DI   ++  K +K RPSF  QTL+RWS K SS+RSSFPWQ+QKIQ  +   +  T V   
Sbjct: 79   DIHNKKKNTKKKKLRPSFCDQTLERWSVKISSRRSSFPWQNQKIQPSQGLSAPGTPVYRS 138

Query: 382  ----DAPEVNSIDSVKNFDEGPGRRRLDLIVEKLNXXXXXXXXXXXXXXXTLGSSVTGIP 549
                 A +++S D +KNFDE   R  LDLIVEKL                +L  SV  IP
Sbjct: 139  LGNYGAADLDSRDQIKNFDEERRRTSLDLIVEKLGGSVVDKCSDSGVSDGSLERSVDEIP 198

Query: 550  PMAPHVRAIPFRKQSISAPWAHGAIQEENHIHPGYGSETLQNNSCFSEEDKRFDKISLLD 729
            P   H R+IPFRK+SISAPW HGA   + HIH G+ +ETL  N  F  ED+R  K + +D
Sbjct: 199  PN--HGRSIPFRKRSISAPWDHGAEHGQKHIHSGFVNETLMKNFEFGGEDERH-KWTSVD 255

Query: 730  EKKSGCKLDGPNSGFTGGNTWQKQDGG*E*E*LLF**SFECVSQGKMPCGFCCVISQISS 909
             K+ GC      S   G N+    +GG           F  +S  K         SQ SS
Sbjct: 256  AKRRGCSDQNKTSLNFGDNSGVSVEGG-----------FHVLSTDKT--------SQTSS 296

Query: 910  TVDASSMSDTEFDSLNVDSDLNVANQLPIRNSELRGNRRKSSFSETVS-LNDSIDSTSSK 1086
             V  +S  D   D L  D+D  VA QLPIR+ +L  N  KS  S  V  L DS+ S++ K
Sbjct: 297  -VGGASFRDHGIDPLEADTDPKVAFQLPIRDYDLNENGGKSRVSVIVDKLKDSMGSSAPK 355

Query: 1087 DYMSVPFDDSDSENEYSSGHGVRKLACSVSVPWERETDSNERQQL--SNTELAE*TIPEP 1260
              +   F  S S++  + G+ V KL   V +PWERETDS E +QL  SNTELAE  IPEP
Sbjct: 356  INVCASFGKSASKHGSNPGNNVVKLVSPVLLPWERETDSKEGEQLHRSNTELAERAIPEP 415

Query: 1261 ELQRLKDAALRMKERMTVGPAGVTEAVVKNIHDEWNETEVVKLRFEGHP-V*T*REHMIF 1437
            EL+RL+DAALRMKERMTVGPAGVTEAVVKNIH++W E EVVKLRFEG P +   R H I 
Sbjct: 416  ELRRLRDAALRMKERMTVGPAGVTEAVVKNIHEKWKEAEVVKLRFEGTPSLNMKRTHEIL 475

Query: 1438 *RY*SHGPLLSHQFEKLVI--KLEVWKVSCV-----------------------IQGN-- 1536
                  G L+  +  + V+  K   +++ C+                       I GN  
Sbjct: 476  EN--KTGGLVIWRSGRSVVLYKGMTYELPCIQTYSKLANTDSNCIPSIKDYFVHITGNPS 533

Query: 1537 ----DLSTATMRDM------SEGILDTSDIDRLLDQFGPRLKDWSCRIPLPVMLTCFLV* 1686
                ++S  +  D       SE   DTSDID +LDQ GPR +DWS R PLPV     L+ 
Sbjct: 534  EESFNISRRSAADSSACGNPSEQFPDTSDIDNILDQLGPRYQDWSGRNPLPV--DADLLP 591

Query: 1687 FLITNHHLDFFFI--RP*ELLRERQMTTLRRLARSMPPHFALVIMVFKFMEGKLSFLYI* 1860
             +I  +   F  +  +    LR+R+MT LRRLAR+MPPHFAL                  
Sbjct: 592  GVIPGYAPPFRLLPYKTRSTLRDREMTALRRLARTMPPHFAL------------------ 633

Query: 1861 NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKSSIAKIAIKRGIPNTCNERMAEEIK 2034
                          GRNRQH+GLAAAIVKLWEKSSI KIAIKRGIPNT NERMAEEIK
Sbjct: 634  --------------GRNRQHQGLAAAIVKLWEKSSIVKIAIKRGIPNTSNERMAEEIK 677


>ref|XP_009412926.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial isoform X1 [Musa acuminata
            subsp. malaccensis]
          Length = 1014

 Score =  411 bits (1056), Expect = e-127
 Identities = 292/658 (44%), Positives = 358/658 (54%), Gaps = 50/658 (7%)
 Frame = +1

Query: 211  DIDTVREKAKNRKPRPSFDAQTLKRWSAKFSSQRSSFPWQDQKIQTFKDFVSLHTSV--- 381
            DI   ++  K +K RPSF  QTL+RWS K SS+RSSFPWQ+QKIQ  +   +  T V   
Sbjct: 79   DIHNKKKNTKKKKLRPSFCDQTLERWSVKISSRRSSFPWQNQKIQPSQGLSAPGTPVYRS 138

Query: 382  ----DAPEVNSIDSVKNFDEGPGRRRLDLIVEKLNXXXXXXXXXXXXXXXTLGSSVTGIP 549
                 A +++S D +KNFDE   R  LDLIVEKL                +L  SV  IP
Sbjct: 139  LGNYGAADLDSRDQIKNFDEERRRTSLDLIVEKLGGSVVDKCSDSGVSDGSLERSVDEIP 198

Query: 550  PMAPHVRAIPFRKQSISAPWAHGAIQEENHIHPGYGSETLQNNSCFSEEDKRFDKISLLD 729
            P   H R+IPFRK+SISAPW HGA   + HIH G+ +ETL  N  F  ED+R  K + +D
Sbjct: 199  PN--HGRSIPFRKRSISAPWDHGAEHGQKHIHSGFVNETLMKNFEFGGEDERH-KWTSVD 255

Query: 730  EKKSGCKLDGPNSGFTGGNTWQKQDGG*E*E*LLF**SFECVSQGKMPCGFCCVISQISS 909
             K+ GC      S   G N+    +GG           F  +S  K         SQ SS
Sbjct: 256  AKRRGCSDQNKTSLNFGDNSGVSVEGG-----------FHVLSTDKT--------SQTSS 296

Query: 910  TVDASSMSDTEFDSLNVDSDLNVANQLPIRNSELRGNRRKSSFSETVS-LNDSIDSTSSK 1086
             V  +S  D   D L  D+D  VA QLPIR+ +L  N  KS  S  V  L DS+ S++ K
Sbjct: 297  -VGGASFRDHGIDPLEADTDPKVAFQLPIRDYDLNENGGKSRVSVIVDKLKDSMGSSAPK 355

Query: 1087 DYMSVPFDDSDSENEYSSGHGVRKLACSVSVPWERETDSNERQQL--SNTELAE*TIPEP 1260
              +   F  S S++  + G+ V KL   V +PWERETDS E +QL  SNTELAE  IPEP
Sbjct: 356  INVCASFGKSASKHGSNPGNNVVKLVSPVLLPWERETDSKEGEQLHRSNTELAERAIPEP 415

Query: 1261 ELQRLKDAALRMKERMTVGPAGVTEAVVKNIHDEWNETEVVKLRFEGHP-V*T*REHMIF 1437
            EL+RL+DAALRMKERMTVGPAGVTEAVVKNIH++W E EVVKLRFEG P +   R H I 
Sbjct: 416  ELRRLRDAALRMKERMTVGPAGVTEAVVKNIHEKWKEAEVVKLRFEGTPSLNMKRTHEIL 475

Query: 1438 *RY*SHGPLLSHQFEKLVI--KLEVWKVSCV-----------------------IQGN-- 1536
                  G L+  +  + V+  K   +++ C+                       I GN  
Sbjct: 476  EN--KTGGLVIWRSGRSVVLYKGMTYELPCIQTYSKLANTDSNCIPSIKDYFVHITGNPS 533

Query: 1537 ----DLSTATMRDM------SEGILDTSDIDRLLDQFGPRLKDWSCRIPLPVMLTCFLV* 1686
                ++S  +  D       SE   DTSDID +LDQ GPR +DWS R PLPV     L+ 
Sbjct: 534  EESFNISRRSAADSSACGNPSEQFPDTSDIDNILDQLGPRYQDWSGRNPLPV--DADLLP 591

Query: 1687 FLITNHHLDFFFI--RP*ELLRERQMTTLRRLARSMPPHFALVIMVFKFMEGKLSFLYI* 1860
             +I  +   F  +  +    LR+R+MT LRRLAR+MPPHFAL                  
Sbjct: 592  GVIPGYAPPFRLLPYKTRSTLRDREMTALRRLARTMPPHFAL------------------ 633

Query: 1861 NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKSSIAKIAIKRGIPNTCNERMAEEIK 2034
                          GRNRQH+GLAAAIVKLWEKSSI KIAIKRGIPNT NERMAEEIK
Sbjct: 634  --------------GRNRQHQGLAAAIVKLWEKSSIVKIAIKRGIPNTSNERMAEEIK 677


>ref|XP_018685812.1| PREDICTED: CRM-domain containing factor CFM3A,
            chloroplastic/mitochondrial isoform X3 [Musa acuminata
            subsp. malaccensis]
          Length = 813

 Score =  303 bits (775), Expect = 5e-88
 Identities = 207/463 (44%), Positives = 261/463 (56%), Gaps = 11/463 (2%)
 Frame = +1

Query: 211  DIDTVREKAKNRKPRPSFDAQTLKRWSAKFSSQRSSFPWQDQKIQTFKDFVSLHTSV--- 381
            DI   ++  K +K RPSF  QTL+RWS K SS+RSSFPWQ+QKIQ  +   +  T V   
Sbjct: 79   DIHNKKKNTKKKKLRPSFCDQTLERWSVKISSRRSSFPWQNQKIQPSQGLSAPGTPVYRS 138

Query: 382  ----DAPEVNSIDSVKNFDEGPGRRRLDLIVEKLNXXXXXXXXXXXXXXXTLGSSVTGIP 549
                 A +++S D +KNFDE   R  LDLIVEKL                +L  SV  IP
Sbjct: 139  LGNYGAADLDSRDQIKNFDEERRRTSLDLIVEKLGGSVVDKCSDSGVSDGSLERSVDEIP 198

Query: 550  PMAPHVRAIPFRKQSISAPWAHGAIQEENHIHPGYGSETLQNNSCFSEEDKRFDKISLLD 729
            P   H R+IPFRK+SISAPW HGA   + HIH G+ +ETL  N  F  ED+R  K + +D
Sbjct: 199  PN--HGRSIPFRKRSISAPWDHGAEHGQKHIHSGFVNETLMKNFEFGGEDERH-KWTSVD 255

Query: 730  EKKSGCKLDGPNSGFTGGNTWQKQDGG*E*E*LLF**SFECVSQGKMPCGFCCVISQISS 909
             K+ GC      S   G N+    +GG           F  +S  K         SQ SS
Sbjct: 256  AKRRGCSDQNKTSLNFGDNSGVSVEGG-----------FHVLSTDKT--------SQTSS 296

Query: 910  TVDASSMSDTEFDSLNVDSDLNVANQLPIRNSELRGNRRKSSFSETVS-LNDSIDSTSSK 1086
             V  +S  D   D L  D+D  VA QLPIR+ +L  N  KS  S  V  L DS+ S++ K
Sbjct: 297  -VGGASFRDHGIDPLEADTDPKVAFQLPIRDYDLNENGGKSRVSVIVDKLKDSMGSSAPK 355

Query: 1087 DYMSVPFDDSDSENEYSSGHGVRKLACSVSVPWERETDSNERQQL--SNTELAE*TIPEP 1260
              +   F  S S++  + G+ V KL   V +PWERETDS E +QL  SNTELAE  IPEP
Sbjct: 356  INVCASFGKSASKHGSNPGNNVVKLVSPVLLPWERETDSKEGEQLHRSNTELAERAIPEP 415

Query: 1261 ELQRLKDAALRMKERMTVGPAGVTEAVVKNIHDEWNETEVVKLRFEGHP-V*T*REHMIF 1437
            EL+RL+DAALRMKERMTVGPAGVTEAVVKNIH++W E EVVKLRFEG P +   R H I 
Sbjct: 416  ELRRLRDAALRMKERMTVGPAGVTEAVVKNIHEKWKEAEVVKLRFEGTPSLNMKRTHEIL 475

Query: 1438 *RY*SHGPLLSHQFEKLVIKLEVWKVSCVIQGNDLSTATMRDM 1566
             +  + G L+S   E +V            +GND  T+++ ++
Sbjct: 476  EKL-TGGVLVSRNKEYIVF----------YRGNDFVTSSVMEV 507


>ref|XP_010912991.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1105

 Score =  271 bits (694), Expect = 8e-75
 Identities = 197/508 (38%), Positives = 267/508 (52%), Gaps = 21/508 (4%)
 Frame = +1

Query: 574  IPFRKQSISAPWAHGAIQEENHIHPGYGSETLQNNSCFSEEDKRFDKISLLDEKKS-GCK 750
            IP   Q + AP   GA   + H+     ++T   +S F  E++    +SL+DE+ +    
Sbjct: 323  IPLGSQPVLAPQIRGARPRQTHLDSEAKNQTSVKDSEFDCEEEPM--VSLMDEQLADSSN 380

Query: 751  LDGPNSG----FTGGNTWQKQDGG*E*E*LLF**SFECVSQGKMPCGFCCVISQISSTVD 918
             D  NS         N  +K +               C+ +  +P               
Sbjct: 381  QDNCNSSQDNILVNYNDEEKPN---------------CIKKHSLP--------------- 410

Query: 919  ASSMSDTEFDSLNVDSDLNVANQLPIRNSELRGNRRKSSFSETVS-LNDSIDSTSSKDYM 1095
             +        ++  D+     NQ+P++  E      KS+ S  V  L  S+D  SS   +
Sbjct: 411  -NKALTVPLGNVAADTVKQHVNQIPLQRLEFDAVSGKSNVSAIVEQLKSSMDQDSSNLEV 469

Query: 1096 SVPFDDSDSENEYSSGHGVRKLACSVSVPWERETDSNERQQL---SNTELAE*TIPEPEL 1266
            ++ +D+SD E   ++ + +  L   VS PWE++  S++R+QL   SNTELAE TIPEPEL
Sbjct: 470  NISYDESDDEGGSNTDYYIANLMGPVSFPWEQDGGSSDREQLHRKSNTELAERTIPEPEL 529

Query: 1267 QRLKDAALRMKERMTVGPAGVTEAVVKNIHDEWNETEVVKLRFEGHP-V*T*REHMIF*R 1443
            +RL+DAALRMKERM VGPAGVTEAVV++IH++W E EVVKLRFEG P +   R H +  R
Sbjct: 530  RRLRDAALRMKERMKVGPAGVTEAVVQSIHEKWKENEVVKLRFEGPPSLCMKRTHEVLER 589

Query: 1444 Y*SHGPLLSHQFEKLVI-KLEVWKVSCVIQGNDLSTA--------TMRDMSEGILDTSDI 1596
              + G ++      LV+ +   +++ CV   + L TA        +  + SEG  DTSDI
Sbjct: 590  K-TGGLVIWRSGRSLVLYRGMTYELPCVQSYSKLVTAKSDSNLMTSSANPSEGSTDTSDI 648

Query: 1597 DRLLDQFGPRLKDWSCRIPLPVMLTCFLV*FLITNHHLDFFFI--RP*ELLRERQMTTLR 1770
            D LLDQ GPR +DWS R PLPV     L+  ++  +   F  +  +    LRE +MT LR
Sbjct: 649  DSLLDQLGPRFRDWSGRSPLPV--DADLLPGVVPGYKPPFRLLPYKTRSSLREGEMTFLR 706

Query: 1771 RLARSMPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKL 1950
            RLAR MPPHFAL                                GRNRQH+GLA AIVKL
Sbjct: 707  RLARKMPPHFAL--------------------------------GRNRQHQGLATAIVKL 734

Query: 1951 WEKSSIAKIAIKRGIPNTCNERMAEEIK 2034
            WEKS+IAKIAIKRG+PNTCNERMAEEIK
Sbjct: 735  WEKSAIAKIAIKRGVPNTCNERMAEEIK 762



 Score = 65.5 bits (158), Expect = 4e-07
 Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
 Frame = +1

Query: 223 VREKAKNRKPRPSFDAQTLKRWSAKFSSQRSSFPWQDQKIQTFKDFVSLHTSVDAPE--- 393
           +++K K RKPRP+F  QT++RWS K SS+RS FPWQ+   +  KD      +   P    
Sbjct: 76  IKKKKKKRKPRPNFYVQTIERWSLKISSERSRFPWQELAAEEKKDASQSLIAAPRPSFRV 135

Query: 394 ---------VNSIDS-----------VKN--FDEGPGRRRLDLIVEKLN 474
                     NS D+           VKN  FD    + RLDLIVEKLN
Sbjct: 136 GNECLPMDGANSGDAQLDSRPKGQKPVKNLEFDGEKRKSRLDLIVEKLN 184


>ref|XP_008797776.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like [Phoenix dactylifera]
          Length = 1017

 Score =  261 bits (667), Expect = 2e-71
 Identities = 198/503 (39%), Positives = 263/503 (52%), Gaps = 16/503 (3%)
 Frame = +1

Query: 574  IPFRKQSISAPWAHGAIQEENHIHPGYGSETLQNNSCFSEEDKRFDKISLLDEKKSGCKL 753
            IP   Q + AP  HGA   + ++     ++T   +S F  E++   +  LLDE+ +    
Sbjct: 236  IPLGSQPVLAPQVHGARPRQTNLDSKAKNQTSLEDSEFDGEEE--PRAGLLDEQIA---- 289

Query: 754  DGPNSGFTGGNTWQKQDGG*E*E*LLF**SFECVSQGKMPCGFCCVISQISSTVDASSMS 933
            D  N      N    QD                V+        C  I Q S T  A ++ 
Sbjct: 290  DSSNQD----NCNLSQDN-------------VLVNSNDEDTPNC--IKQHSLTNKALAVP 330

Query: 934  DTEFDSLNVDSDLNVANQLPIRNSELRGNRRKSSFSETVS-LNDSIDSTSSKDYMSVPFD 1110
                 ++  D+     NQ+P++  E      KS+ S  +  L  S+D  SS    ++   
Sbjct: 331  ---LGNVAADTVKQHVNQVPLQRLEFDAVSGKSNVSAILEKLKSSMDQDSSSIDSNISCG 387

Query: 1111 DSDSENEYSSGHGVRKLACSVSVPWERETDSNERQQL---SNTELAE*TIPEPELQRLKD 1281
             SD E   ++ + +  L   VS PWER+  S +R+QL   SNTELAE TIPEPEL+RL+D
Sbjct: 388  VSDDERGSNTDYYIANLMGPVSFPWERDGGSRDREQLHRKSNTELAERTIPEPELRRLRD 447

Query: 1282 AALRMKERMTVGPAGVTEAVVKNIHDEWNETEVVKLRFEGHP-V*T*REHMIF*RY*SHG 1458
            AALRMKERM VGPAGVTEAVV++IH++W E EVVKLRFEG P +   R H +  R  + G
Sbjct: 448  AALRMKERMKVGPAGVTEAVVQSIHEKWKENEVVKLRFEGPPSLCMKRTHEVLERK-TGG 506

Query: 1459 PLLSHQFEKLVI-KLEVWKVSCVIQGNDLST--------ATMRDMSEGILDTSDIDRLLD 1611
             ++      LV+ +   +++ CV   + L           +  + SEG +DTSDID LLD
Sbjct: 507  LVIWRSGRSLVLYRGMTYELPCVQSYSKLVNTKSDSNLMTSSANPSEGSIDTSDIDNLLD 566

Query: 1612 QFGPRLKDWSCRIPLPVMLTCFLV*FLITNHHLDFFFI--RP*ELLRERQMTTLRRLARS 1785
            Q GPR KDWS R PLPV     L+  ++  +   F  +  +    LRE +MT LRRLAR 
Sbjct: 567  QLGPRFKDWSGRNPLPV--DADLLPGVVPGYKPPFRLLPYKTRSSLREGEMTFLRRLARK 624

Query: 1786 MPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKSS 1965
            MPPHFAL                                GRNRQH+GLA A+VKLWEKS+
Sbjct: 625  MPPHFAL--------------------------------GRNRQHQGLATAVVKLWEKSA 652

Query: 1966 IAKIAIKRGIPNTCNERMAEEIK 2034
            IAKIAIKRG+PNTCN+RMAEEIK
Sbjct: 653  IAKIAIKRGVPNTCNDRMAEEIK 675


>ref|XP_015612635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Oryza sativa Japonica Group]
 ref|XP_015612636.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Oryza sativa Japonica Group]
 dbj|BAD23409.1| putative CRS1 [Oryza sativa Japonica Group]
 dbj|BAD33710.1| putative CRS1 [Oryza sativa Japonica Group]
 dbj|BAF24904.1| Os09g0363100 [Oryza sativa Japonica Group]
 gb|EAZ31373.1| hypothetical protein OsJ_15500 [Oryza sativa Japonica Group]
 dbj|BAT07711.1| Os09g0363100 [Oryza sativa Japonica Group]
          Length = 947

 Score =  219 bits (557), Expect = 8e-57
 Identities = 195/640 (30%), Positives = 280/640 (43%), Gaps = 41/640 (6%)
 Frame = +1

Query: 238  KNRKPRPSFDAQTLKRWSAKFSSQRSSFPWQDQKIQTFKDFVSLHTSVDAPEVNSIDSVK 417
            K R  +PSF+ Q ++RWSA+  SQR+SFPWQ Q+ Q              P     ++  
Sbjct: 71   KRRSLKPSFEKQAIRRWSARAPSQRASFPWQQQQQQ------------QQPGGGEGEAAG 118

Query: 418  NFDEG-PGRRRLDLIVE--KLNXXXXXXXXXXXXXXXTLGSSVTGIPPMAPHVR-AIPFR 585
            + + G  G   L  IV+    +                +G          P    +    
Sbjct: 119  DQESGWSGSSTLQSIVDYFDFDYDSSDGDGDGDGDGVVVGGEAAEAQEDGPRPEPSFLLG 178

Query: 586  KQSISAPWAHGAIQEENHIHPGYGSETLQNNSCFSEEDKRFDKISLLDEKKSGCKLDGPN 765
             + +SAPW HG                        EE+   +++   +E   G       
Sbjct: 179  SRPVSAPWMHG------------------------EEEPMTNQLVSDEEGLDGDGASEDE 214

Query: 766  SGFTGGNTWQKQDGG*E*E*LLF**SFECVSQGKMPCGFCCVISQISSTVDASSMSDTEF 945
             G   G+  + +D G E E      +    S G+    +       +   ++SSM D+  
Sbjct: 215  MGLVDGDGDEDEDLGSEEE------TLSESSDGEFSEDYA------APAANSSSMMDSVL 262

Query: 946  DSLNVDSDLNVANQLPIRNSELRGNRRKSSFSETVSLNDSIDSTSSKDYMSVPFDDSDSE 1125
            D ++                  RG RR S  S   ++ +S++ +S    +  P  +    
Sbjct: 263  DHVSSGGGF------------YRGTRRSSVNSIVNTMRNSMEESSRNAAIECPETEDF-- 308

Query: 1126 NEYSSGHGVRKLACSVSVPWERETDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKER 1305
                    V+KL   V +PWERE D +  ++ SNTELAE TIPE EL+RL+D ALRMKER
Sbjct: 309  --------VQKLG-PVLLPWEREGDVDRPRKRSNTELAERTIPEHELRRLRDVALRMKER 359

Query: 1306 MTVGPAGVTEAVVKNIHDEWNETEVVKLRFEGHPV*T*REHMIF*RY*SHGPLLSHQFEK 1485
            M VGP GVT+ +V++IH +W   EVVKLRFEG P    +         + G ++      
Sbjct: 360  MRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRS 419

Query: 1486 LVIKLEV-WKVSCV--------------IQGNDL-----------STATMRDMSEGILDT 1587
            +V+   + + + CV              +  N +           S A   + S  I+++
Sbjct: 420  VVLYRGMNYNLRCVQSYTQTTEVNFDKRVSSNSVEPIHVEHKFQKSGADGLNRSAYIVNS 479

Query: 1588 SD-------IDRLLDQFGPRLKDWSCRIPLPVMLTCFLV*FLITNHHLDF----FFIRP* 1734
            S+       ID  LDQ GPR KDWS R P+PV     L+  ++  +   F    + ++  
Sbjct: 480  SEKPTETFDIDSFLDQLGPRYKDWSGRGPIPV--DADLLPGVVPGYKTPFRLLPYMVK-- 535

Query: 1735 ELLRERQMTTLRRLARSMPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNR 1914
              LR ++MT LRRLAR   PHFAL                                GRNR
Sbjct: 536  STLRNKEMTALRRLARQTAPHFAL--------------------------------GRNR 563

Query: 1915 QHEGLAAAIVKLWEKSSIAKIAIKRGIPNTCNERMAEEIK 2034
            +H+GLA AIVKLWEKSSIAKIAIKRG+PNTCN+RMAEEI+
Sbjct: 564  EHQGLATAIVKLWEKSSIAKIAIKRGVPNTCNDRMAEEIR 603


>gb|EAY94887.1| hypothetical protein OsI_16687 [Oryza sativa Indica Group]
          Length = 893

 Score =  218 bits (554), Expect = 1e-56
 Identities = 188/607 (30%), Positives = 264/607 (43%), Gaps = 8/607 (1%)
 Frame = +1

Query: 238  KNRKPRPSFDAQTLKRWSAKFSSQRSSFPWQDQKIQTFKDFVSLHTSVDAPEVNSIDSVK 417
            K R  +PSF+ Q ++RWSA+  SQR+SFPWQ Q+ Q              P     ++  
Sbjct: 71   KRRSLKPSFEKQAIRRWSARAPSQRASFPWQQQQQQQ-------------PAGGEGEAAG 117

Query: 418  NFDEG-PGRRRLDLIVE--KLNXXXXXXXXXXXXXXXTLGSSVTGIPPMAPHVR-AIPFR 585
            + + G  G   L  IV+    +                +G          P    +    
Sbjct: 118  DQESGWSGSSTLQSIVDYFDFDYDSSDGDGDGDGDGVVVGGEAAEAQEDGPRPEPSFLLG 177

Query: 586  KQSISAPWAHGAIQEENHIHPGYGSETLQNNSCFSEEDKRFDKISLLDEKKSGCKLDGPN 765
             + +SAPW HG                        EE+   +++   +E   G       
Sbjct: 178  SRPVSAPWMHG------------------------EEEPMTNQLVSDEEGLDGDGASEDE 213

Query: 766  SGFTGGNTWQKQDGG*E*E*LLF**SFECVSQGKMPCGFCCVISQISSTVDASSMSDTEF 945
             G   G+  + +D G E E      +    S G+    +       +   ++SSM D+  
Sbjct: 214  MGLVDGDGDEDEDLGSEEE------TLSESSDGEFSEDYA------APAANSSSMMDSVL 261

Query: 946  DSLNVDSDLNVANQLPIRNSELRGNRRKSSFSETVSLNDSIDSTSSKDYMSVPFDDSDSE 1125
            D ++                  RG RR S  S   ++ +S++ +S    +  P  +    
Sbjct: 262  DHVSSGGGF------------YRGTRRSSVNSIVNTMRNSMEESSRNAAIECPETEDF-- 307

Query: 1126 NEYSSGHGVRKLACSVSVPWERETDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKER 1305
                    V+KL   V +PWERE D +  ++ SNTELAE TIPE EL+RL+D ALRMKER
Sbjct: 308  --------VQKLG-PVLLPWEREGDVDRPRKRSNTELAERTIPEHELRRLRDVALRMKER 358

Query: 1306 MTVGPAGVTEAVVKNIHDEWNETEVVKLRFEGHPV*T*REHMIF*RY*SHGPLLSHQFEK 1485
            M VGP GVT+ +V++IH +W   EVVKLRFEG P                    S   ++
Sbjct: 359  MRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPP--------------------SLNMKR 398

Query: 1486 LVIKLEVWKVSCVIQGNDLSTATMRDMSEGILDTSDIDRLLDQFGPRLKDWSCRIPLPVM 1665
                LE      VI  +  S    R M+  +       +   + GPR KDWS R P+PV 
Sbjct: 399  THDILEERTGGIVIWRSGRSVVLYRGMNYNLRCVQSYTQ-TTELGPRYKDWSGRGPIPV- 456

Query: 1666 LTCFLV*FLITNHHLDF----FFIRP*ELLRERQMTTLRRLARSMPPHFALVIMVFKFME 1833
                L+  ++  +   F    + ++    LR ++MT LRRLAR   PHFAL         
Sbjct: 457  -DADLLPGVVPGYKTPFRLLPYMVK--STLRNKEMTALRRLARQTAPHFAL--------- 504

Query: 1834 GKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKSSIAKIAIKRGIPNTCNE 2013
                                   GRNR+H+GLA AIVKLWEKSSIAKIAIKRG+PNTCN+
Sbjct: 505  -----------------------GRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCND 541

Query: 2014 RMAEEIK 2034
            RMAEEI+
Sbjct: 542  RMAEEIR 548


>ref|XP_020259135.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
            [Asparagus officinalis]
 gb|ONK76559.1| uncharacterized protein A4U43_C03F29530 [Asparagus officinalis]
          Length = 907

 Score =  204 bits (519), Expect = 7e-52
 Identities = 157/412 (38%), Positives = 213/412 (51%), Gaps = 44/412 (10%)
 Frame = +1

Query: 931  SDTEFDSLNVDSDLNVANQLPIRNSELRG----NRRKSSFSETVSLND----SIDSTSSK 1086
            S  E ++ +  SD N +   P  N +++     N  +    +T++ N       D+ S K
Sbjct: 190  SGGEHENKDEASDHNESKCNPNENDDVKPKVDRNDSRHDAIDTIAENSMATLEFDAQSGK 249

Query: 1087 DYMSVPFDDSDS---------ENEYSSGHGVRKLACSVSVPWERETDSNERQ--QLSNTE 1233
              +S+  D+  S         +N  S+ H V KL  SV  PWE     N  +  + SNTE
Sbjct: 250  SSVSLIVDELKSSLDEDKPSPDNASSTSHDVVKLLGSVPFPWESSNGRNGEKFHKRSNTE 309

Query: 1234 LAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIHDEWNETEVVKLRFEGHP-V 1410
            LAE TIPE ELQRL++AALRMKERM VG AGVTEA+V++IH +W   EVVKL F G P +
Sbjct: 310  LAEKTIPEHELQRLRNAALRMKERMKVGAAGVTEALVESIHKKWKVDEVVKLWFAGPPTL 369

Query: 1411 *T*REHMIF*RY*SHGPLLSHQFEKLVI-KLEVWKVSCV-----IQGNDLSTATM----- 1557
               + H I  R  + G ++      +V+ +   +++ CV     +   D S  T+     
Sbjct: 370  HMKKTHEILERK-TGGLVIWRSGSSIVLYRGMTYELPCVQSYSKLAATDSSHKTIDAAKN 428

Query: 1558 -----------RDMSEGILDTSDIDRLLDQFGPRLKDWSCRIPLPVMLTCFLV*FLITNH 1704
                        D+S+   +  DID  LD+ GPR +DWS   P+PV      +  L+  +
Sbjct: 429  TMNHFIKDSKPSDLSKESAENFDIDSFLDKLGPRYRDWSGCNPIPV--DADRLPGLVPGY 486

Query: 1705 HLDFFFI--RP*ELLRERQMTTLRRLARSMPPHFALVIMVFKFMEGKLSFLYI*NSHSYK 1878
               F  +  +    L+ RQMT+LRRLAR+M PHFAL                        
Sbjct: 487  TPPFRLLPYKTKGALKNRQMTSLRRLARTMSPHFAL------------------------ 522

Query: 1879 LSLFARSVGRNRQHEGLAAAIVKLWEKSSIAKIAIKRGIPNTCNERMAEEIK 2034
                    GRNRQH+GLA A+VKLWEKS+IAKIAIKRG+PNTCNERMAEEIK
Sbjct: 523  --------GRNRQHQGLAKAMVKLWEKSAIAKIAIKRGVPNTCNERMAEEIK 566


>gb|PAN12088.1| hypothetical protein PAHAL_B02499 [Panicum hallii]
 gb|PAN12089.1| hypothetical protein PAHAL_B02499 [Panicum hallii]
 gb|PAN12090.1| hypothetical protein PAHAL_B02499 [Panicum hallii]
          Length = 951

 Score =  192 bits (488), Expect = 1e-47
 Identities = 146/382 (38%), Positives = 197/382 (51%), Gaps = 44/382 (11%)
 Frame = +1

Query: 1021 RRKSSFSETVSLNDSIDSTSSKDYMSVPFDDSDSENEYSSGHGVRKLACSVSVPWERETD 1200
            RR S  S   +L  S++ +S     +V  + S++E+       V+KL   V +PWERE +
Sbjct: 271  RRGSVNSIVKTLRSSMEESSP----NVTIEQSNAEDF------VQKLG-PVLLPWEREEE 319

Query: 1201 SNER------QQLSNTELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIHDE 1362
             +E        + SNTELA+ TIPE EL+RL+DAALRMKER+ VGP GVT+ +V+NIH +
Sbjct: 320  DDEVFGGGKVGRHSNTELADRTIPEHELRRLRDAALRMKERIKVGPGGVTQDIVENIHRK 379

Query: 1363 WNETEVVKLRFEGHPV*T*REHMIF*RY*SHGPLLSHQFEKLVIKLEV-WKVSCV----- 1524
            W   EVVK+RFEG P    +         + G ++      +V+   + + + CV     
Sbjct: 380  WKVDEVVKMRFEGPPSLNMKRAHDLLEDRTGGIVIWRSGRSVVLYRGMNYNLQCVQSYAK 439

Query: 1525 ------------------IQGNDLSTATMRD----------MSEGILDTS--DIDRLLDQ 1614
                              I G   S  +  D           S+ + DT   DID  LDQ
Sbjct: 440  FTEIDSDKEVADANSAVPIHGGHNSHKSRADGVKRSTSSGNFSQELEDTQAFDIDAFLDQ 499

Query: 1615 FGPRLKDWSCRIPLPVMLTCFLV*FLITNHHLDFFFI--RP*ELLRERQMTTLRRLARSM 1788
             GPR KDWS R P+PV     L+  ++  +   F  +  +    LR+++MT LRRLAR  
Sbjct: 500  LGPRFKDWSGRSPIPV--DADLLPGVVPGYKPPFRILPYKIKSTLRDKEMTALRRLARQT 557

Query: 1789 PPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKSSI 1968
             PHFAL                                GRNR+H+GLAAA+VKLWEKS+I
Sbjct: 558  APHFAL--------------------------------GRNREHQGLAAAMVKLWEKSAI 585

Query: 1969 AKIAIKRGIPNTCNERMAEEIK 2034
            AKIAIKRG+PNTCN+RMAEEIK
Sbjct: 586  AKIAIKRGVPNTCNDRMAEEIK 607


>ref|XP_010242233.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 868

 Score =  179 bits (453), Expect = 2e-43
 Identities = 140/389 (35%), Positives = 192/389 (49%), Gaps = 53/389 (13%)
 Frame = +1

Query: 1027 KSSFSETVSLNDSIDSTSSKDYMSVPFDDSDS--------ENEYSSGHGVRKLACSVSVP 1182
            K S    V+ + S+      DY+    DDS            E S+G+G      SV +P
Sbjct: 189  KISEDSVVNHSGSLKEEQRSDYIR---DDSVKIGPPLTGFSGEQSTGNGD-----SVRLP 240

Query: 1183 WERE----TDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKN 1350
            WE+E    +    R + S TELA  T+PE EL+RL++ ALRMKER+ VG AG+T+ +V +
Sbjct: 241  WEKEKFLESVDRGRWRRSTTELAAKTVPETELRRLRNVALRMKERIKVGAAGITQDLVDS 300

Query: 1351 IHDEWNETEVVKLRFEGHPV*T*REHMIF*RY*SHGPLLSHQFEKLVIKLEV-WKVSCV- 1524
            I ++W E EVVKL+FEG P    +         + G ++      +V+   + +K  CV 
Sbjct: 301  IIEKWKEDEVVKLKFEGPPALNMKRTHEALESKTRGLVIWRSGSSVVLYRGMSYKFPCVE 360

Query: 1525 ----------------------IQGN-----------DLSTATM---RDMSEGILDTSDI 1596
                                    GN             ST TM   +D+S  ++D +D+
Sbjct: 361  SYIKDNQANPDIASHSKESKIDFSGNICVTDAIQTKESSSTGTMTYDKDLSRELMDMTDL 420

Query: 1597 DRLLDQFGPRLKDWSCRIPLPV---MLTCFLV*FLITNHHLDFFFIRP*ELLRERQMTTL 1767
            + LLD+ GPR +DWS   P PV   +L C +  +      L  + IR    L+ ++MT+ 
Sbjct: 421  NNLLDELGPRFRDWSGCEPKPVDADLLPCVVPGYKPPFRLLP-YGIR--HCLKNKEMTSF 477

Query: 1768 RRLARSMPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVK 1947
            RRLARSMPPHFAL                                GRNRQ +GLA A+VK
Sbjct: 478  RRLARSMPPHFAL--------------------------------GRNRQLQGLARAMVK 505

Query: 1948 LWEKSSIAKIAIKRGIPNTCNERMAEEIK 2034
            LWE+S IAKIAIKRG+ NTCNERMAEE+K
Sbjct: 506  LWERSEIAKIAIKRGVQNTCNERMAEELK 534


>gb|KDO48176.1| hypothetical protein CISIN_1g003573mg [Citrus sinensis]
          Length = 791

 Score =  164 bits (416), Expect = 9e-39
 Identities = 122/324 (37%), Positives = 168/324 (51%), Gaps = 38/324 (11%)
 Frame = +1

Query: 1177 VPWERETDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIH 1356
            +PW+R TD   R++ SNTELAE  IPE ELQRL++ +LRM ER  VG AG+T+A+V +IH
Sbjct: 229  LPWKRNTD---RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIH 285

Query: 1357 DEWNETEVVKLRF-EGHPV*T*REHMIF*RY*SHGPLLSHQFEKLVIKLEVWKVSCV--- 1524
            ++W   EVVKL+F E H +   R H I  R      +       ++ +   +K+ CV   
Sbjct: 286  EKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSF 345

Query: 1525 ------IQGNDLSTATMRDM------------------------SEGILDTSDIDRLLDQ 1614
                   Q  D++   MR++                         E ++D  +++ LLD+
Sbjct: 346  TKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDE 405

Query: 1615 FGPRLKDWSCRIPLPVMLTCFLV*FLITNH----HLDFFFIRP*ELLRERQMTTLRRLAR 1782
             GPR KDW  R PLPV     L+  ++ ++     L  + I+P   LR+ + T  RRLAR
Sbjct: 406  LGPRFKDWPGREPLPV--DADLLPPVVPDYKPPLRLLPYGIKP--GLRDCETTEFRRLAR 461

Query: 1783 SMPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKS 1962
              PPHFAL                                GRNR+ +GLA A+VKLWEKS
Sbjct: 462  KTPPHFAL--------------------------------GRNRELQGLAKAMVKLWEKS 489

Query: 1963 SIAKIAIKRGIPNTCNERMAEEIK 2034
            +IAKIAIKR + NT NERMAEE+K
Sbjct: 490  AIAKIAIKRDVMNTRNERMAEELK 513


>gb|KDO48175.1| hypothetical protein CISIN_1g003573mg [Citrus sinensis]
          Length = 801

 Score =  164 bits (416), Expect = 9e-39
 Identities = 122/324 (37%), Positives = 168/324 (51%), Gaps = 38/324 (11%)
 Frame = +1

Query: 1177 VPWERETDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIH 1356
            +PW+R TD   R++ SNTELAE  IPE ELQRL++ +LRM ER  VG AG+T+A+V +IH
Sbjct: 229  LPWKRNTD---RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIH 285

Query: 1357 DEWNETEVVKLRF-EGHPV*T*REHMIF*RY*SHGPLLSHQFEKLVIKLEVWKVSCV--- 1524
            ++W   EVVKL+F E H +   R H I  R      +       ++ +   +K+ CV   
Sbjct: 286  EKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSF 345

Query: 1525 ------IQGNDLSTATMRDM------------------------SEGILDTSDIDRLLDQ 1614
                   Q  D++   MR++                         E ++D  +++ LLD+
Sbjct: 346  TKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDE 405

Query: 1615 FGPRLKDWSCRIPLPVMLTCFLV*FLITNH----HLDFFFIRP*ELLRERQMTTLRRLAR 1782
             GPR KDW  R PLPV     L+  ++ ++     L  + I+P   LR+ + T  RRLAR
Sbjct: 406  LGPRFKDWPGREPLPV--DADLLPPVVPDYKPPLRLLPYGIKP--GLRDCETTEFRRLAR 461

Query: 1783 SMPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKS 1962
              PPHFAL                                GRNR+ +GLA A+VKLWEKS
Sbjct: 462  KTPPHFAL--------------------------------GRNRELQGLAKAMVKLWEKS 489

Query: 1963 SIAKIAIKRGIPNTCNERMAEEIK 2034
            +IAKIAIKR + NT NERMAEE+K
Sbjct: 490  AIAKIAIKRDVMNTRNERMAEELK 513


>gb|KDO48172.1| hypothetical protein CISIN_1g003573mg [Citrus sinensis]
 gb|KDO48173.1| hypothetical protein CISIN_1g003573mg [Citrus sinensis]
 gb|KDO48174.1| hypothetical protein CISIN_1g003573mg [Citrus sinensis]
          Length = 810

 Score =  164 bits (416), Expect = 1e-38
 Identities = 122/324 (37%), Positives = 168/324 (51%), Gaps = 38/324 (11%)
 Frame = +1

Query: 1177 VPWERETDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIH 1356
            +PW+R TD   R++ SNTELAE  IPE ELQRL++ +LRM ER  VG AG+T+A+V +IH
Sbjct: 229  LPWKRNTD---RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIH 285

Query: 1357 DEWNETEVVKLRF-EGHPV*T*REHMIF*RY*SHGPLLSHQFEKLVIKLEVWKVSCV--- 1524
            ++W   EVVKL+F E H +   R H I  R      +       ++ +   +K+ CV   
Sbjct: 286  EKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSF 345

Query: 1525 ------IQGNDLSTATMRDM------------------------SEGILDTSDIDRLLDQ 1614
                   Q  D++   MR++                         E ++D  +++ LLD+
Sbjct: 346  TKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDE 405

Query: 1615 FGPRLKDWSCRIPLPVMLTCFLV*FLITNH----HLDFFFIRP*ELLRERQMTTLRRLAR 1782
             GPR KDW  R PLPV     L+  ++ ++     L  + I+P   LR+ + T  RRLAR
Sbjct: 406  LGPRFKDWPGREPLPV--DADLLPPVVPDYKPPLRLLPYGIKP--GLRDCETTEFRRLAR 461

Query: 1783 SMPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKS 1962
              PPHFAL                                GRNR+ +GLA A+VKLWEKS
Sbjct: 462  KTPPHFAL--------------------------------GRNRELQGLAKAMVKLWEKS 489

Query: 1963 SIAKIAIKRGIPNTCNERMAEEIK 2034
            +IAKIAIKR + NT NERMAEE+K
Sbjct: 490  AIAKIAIKRDVMNTRNERMAEELK 513


>ref|XP_006451488.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
            [Citrus clementina]
 gb|ESR64728.1| hypothetical protein CICLE_v10007477mg [Citrus clementina]
 dbj|GAY62279.1| hypothetical protein CUMW_216540 [Citrus unshiu]
          Length = 810

 Score =  164 bits (416), Expect = 1e-38
 Identities = 122/324 (37%), Positives = 168/324 (51%), Gaps = 38/324 (11%)
 Frame = +1

Query: 1177 VPWERETDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIH 1356
            +PW+R TD   R++ SNTELAE  IPE ELQRL++ +LRM ER  VG AG+T+A+V +IH
Sbjct: 229  LPWKRNTD---RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIH 285

Query: 1357 DEWNETEVVKLRF-EGHPV*T*REHMIF*RY*SHGPLLSHQFEKLVIKLEVWKVSCV--- 1524
            ++W   EVVKL+F E H +   R H I  R      +       ++ +   +K+ CV   
Sbjct: 286  EKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSF 345

Query: 1525 ------IQGNDLSTATMRDM------------------------SEGILDTSDIDRLLDQ 1614
                   Q  D++   MR++                         E ++D  +++ LLD+
Sbjct: 346  TKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDE 405

Query: 1615 FGPRLKDWSCRIPLPVMLTCFLV*FLITNH----HLDFFFIRP*ELLRERQMTTLRRLAR 1782
             GPR KDW  R PLPV     L+  ++ ++     L  + I+P   LR+ + T  RRLAR
Sbjct: 406  LGPRFKDWPGREPLPV--DADLLPPVVPDYKPPLRLLPYGIKP--GLRDCETTEFRRLAR 461

Query: 1783 SMPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKS 1962
              PPHFAL                                GRNR+ +GLA A+VKLWEKS
Sbjct: 462  KTPPHFAL--------------------------------GRNRELQGLAKAMVKLWEKS 489

Query: 1963 SIAKIAIKRGIPNTCNERMAEEIK 2034
            +IAKIAIKR + NT NERMAEE+K
Sbjct: 490  AIAKIAIKRDVMNTRNERMAEELK 513


>ref|XP_006475466.2| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic [Citrus
            sinensis]
          Length = 868

 Score =  164 bits (416), Expect = 1e-38
 Identities = 122/324 (37%), Positives = 168/324 (51%), Gaps = 38/324 (11%)
 Frame = +1

Query: 1177 VPWERETDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIH 1356
            +PW+R TD   R++ SNTELAE  IPE ELQRL++ +LRM ER  VG AG+T+A+V +IH
Sbjct: 231  LPWKRNTD---RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIH 287

Query: 1357 DEWNETEVVKLRF-EGHPV*T*REHMIF*RY*SHGPLLSHQFEKLVIKLEVWKVSCV--- 1524
            ++W   EVVKL+F E H +   R H I  R      +       ++ +   +K+ CV   
Sbjct: 288  EKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSF 347

Query: 1525 ------IQGNDLSTATMRDM------------------------SEGILDTSDIDRLLDQ 1614
                   Q  D++   MR++                         E ++D  +++ LLD+
Sbjct: 348  TKHNHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDE 407

Query: 1615 FGPRLKDWSCRIPLPVMLTCFLV*FLITNH----HLDFFFIRP*ELLRERQMTTLRRLAR 1782
             GPR KDW  R PLPV     L+  ++ ++     L  + I+P   LR+ + T  RRLAR
Sbjct: 408  LGPRFKDWPGREPLPV--DADLLPPVVPDYKPPLRLLPYGIKP--GLRDCETTEFRRLAR 463

Query: 1783 SMPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKS 1962
              PPHFAL                                GRNR+ +GLA A+VKLWEKS
Sbjct: 464  KTPPHFAL--------------------------------GRNRELQGLAKAMVKLWEKS 491

Query: 1963 SIAKIAIKRGIPNTCNERMAEEIK 2034
            +IAKIAIKR + NT NERMAEE+K
Sbjct: 492  AIAKIAIKRDVMNTRNERMAEELK 515


>ref|XP_010047561.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Eucalyptus grandis]
 gb|KCW79506.1| hypothetical protein EUGRSUZ_C00880 [Eucalyptus grandis]
          Length = 894

 Score =  164 bits (416), Expect = 1e-38
 Identities = 122/323 (37%), Positives = 170/323 (52%), Gaps = 34/323 (10%)
 Frame = +1

Query: 1168 SVSVPWERETDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVK 1347
            SV++PW+R+ D   R++  + +LAE  IP+ EL+RL+  ALRM ERM VG AG+T A+V 
Sbjct: 276  SVALPWKRDGDGEGRRK--HVDLAERVIPQHELRRLRKIALRMVERMKVGDAGITRALVD 333

Query: 1348 NIHDEWNETEVVKLRFEG-HPV*T*REHMIF*RY*SHGPLLSHQFEKLVIKLEVWKVSCV 1524
            +IH++W E EVVKL+FEG   +   R H           +       ++ +   + + CV
Sbjct: 334  SIHEKWREDEVVKLKFEGPQSLNMKRTHETLESRTGGFVIWRSGSSVVLYRGMAYTLPCV 393

Query: 1525 ------IQGN-------DL---------------STATMRDMS-EGILDTSDIDRLLDQF 1617
                  IQG+       D+               S   M+D+S E  +D +D + LLD+ 
Sbjct: 394  QSYNEKIQGSVSSLKNEDIASDVFHSKGGRILCGSADYMKDLSKEKRMDMNDPNSLLDEL 453

Query: 1618 GPRLKDWSCRIPLPVMLTCFLV*FLITNHHLDF----FFIRP*ELLRERQMTTLRRLARS 1785
            GPR KDWS   P+PV     L+   +  +   F    + +R    LR ++MT  RRLAR+
Sbjct: 454  GPRFKDWSGCEPVPV--DADLLPSEVPGYKPPFRLLPYGVR--HCLRNKEMTRFRRLART 509

Query: 1786 MPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKSS 1965
            MPPHFAL                                GRNR+ +GLA A+VKLWE S+
Sbjct: 510  MPPHFAL--------------------------------GRNRKLQGLAEAMVKLWESSA 537

Query: 1966 IAKIAIKRGIPNTCNERMAEEIK 2034
            IAKIAIKRG+ NTCN+RMAEE+K
Sbjct: 538  IAKIAIKRGVLNTCNDRMAEELK 560


>gb|PPS19703.1| hypothetical protein GOBAR_AA00880 [Gossypium barbadense]
          Length = 754

 Score =  159 bits (401), Expect = 6e-37
 Identities = 114/320 (35%), Positives = 163/320 (50%), Gaps = 39/320 (12%)
 Frame = +1

Query: 1192 ETDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIHDEWNE 1371
            E D    ++ SNTE+AE  IPE EL+RL++ ALRM ER  VG AG+T+A+V++IH+ W  
Sbjct: 139  EGDGKRGKKKSNTEMAERMIPEHELRRLRNFALRMVERTKVGAAGITQALVEHIHERWKL 198

Query: 1372 TEVVKLRFEGH-PV*T*REHMIF*RY*SHGPLLSHQFEKLVIKLEVWKVSCV--IQGNDL 1542
             EV+KL+FE    +   R H +  +      +       ++ +   +K+ CV    G D 
Sbjct: 199  DEVIKLKFEEPLSLNMKRTHEVLEKRTGGLVIWRAGGSVVLYRGMAYKLHCVQSYSGQDQ 258

Query: 1543 STATMRDM--------------------------------SEGILDTSDIDRLLDQFGPR 1626
            +  +  D+                                 E ++D  +++ LLD+ GPR
Sbjct: 259  ADTSALDVITTNTENMVVKDCVRTEESFMPSSSEYLKDLSKEELMDLCELNHLLDELGPR 318

Query: 1627 LKDWSCRIPLPVMLTCFLV*FLITNHHLDF----FFIRP*ELLRERQMTTLRRLARSMPP 1794
             KDWS R PLPV     L+  ++  +   F    + +R    L++ +MTT RRLARSMPP
Sbjct: 319  YKDWSGREPLPV--DADLLPPVVPGYQPPFRRLPYGVR--HCLKDCEMTTFRRLARSMPP 374

Query: 1795 HFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKSSIAK 1974
            HFAL                                GRNR+ +GLA AIVKLWE+++IAK
Sbjct: 375  HFAL--------------------------------GRNRELQGLAQAIVKLWERTAIAK 402

Query: 1975 IAIKRGIPNTCNERMAEEIK 2034
            IA+KRG+ NT NERMAEE+K
Sbjct: 403  IAVKRGVENTRNERMAEELK 422


>ref|XP_010696507.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Beta vulgaris subsp.
            vulgaris]
 gb|KMS96826.1| hypothetical protein BVRB_8g199040 [Beta vulgaris subsp. vulgaris]
          Length = 860

 Score =  159 bits (402), Expect = 7e-37
 Identities = 135/407 (33%), Positives = 201/407 (49%), Gaps = 37/407 (9%)
 Frame = +1

Query: 925  SMSDTEFDSLNVDSDLNVANQLPIRNSELRGNRRKSS-------FSETVSLN-----DSI 1068
            ++S+T  + +N   D ++ N   +   +L   +   +       FSE +S N      S+
Sbjct: 148  TLSNTVSEPVNSTLDYSLINSSFVEKKKLTEPKLVRTYQSNVVEFSEKLSNNLAPENVSV 207

Query: 1069 DSTSSKDYMSVPFDDSDSENEYSSGHGVRKLACSVSVPWERETDSNER----QQLSNTEL 1236
               S     S  +DD  SE   SS  G  K      +PW  ET S +     ++   TE+
Sbjct: 208  QEESKVTLFSSEYDDVVSE---SSVQGKSK----DRLPWVSETGSEKSDGDGEKKGKTEI 260

Query: 1237 AE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIHDEWNETEVVKLRFEGHPV*T 1416
            AE  +PE EL+RL++ ALRMKER+ VG AGVT+ +V+ IHD+W   EVVKL+FEG  +  
Sbjct: 261  AEKLVPEHELKRLRNVALRMKERIKVGAAGVTQVLVEEIHDKWKIDEVVKLKFEGPSMLN 320

Query: 1417 *REHMIF*RY*SHGPLLSHQFEKLVI-KLEVWKVSCV---------------IQGNDL-- 1542
             +         + G ++      +V+ +   +++ CV                QG  +  
Sbjct: 321  MKRIHDVLESKTGGLVIWRSGSSVVLFRGSTYQLDCVQSYKEEKEVNLDVLHNQGKRVPD 380

Query: 1543 STATMRDMS-EGILDTSDIDRLLDQFGPRLKDWSCRIPLPVMLTCF--LV*FLITNHHLD 1713
            S    R +S E  ++ S++D +L++ GPR  DWS   PLPV       +V    T + L 
Sbjct: 381  SVRLPRKLSKEESMEMSELDNILNELGPRYVDWSGPPPLPVDADALPAVVPGYRTPYRLL 440

Query: 1714 FFFIRP*ELLRERQMTTLRRLARSMPPHFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFA 1893
             + +R    L +++ T  RR+AR+ PPHFAL                             
Sbjct: 441  PYGVR--RGLTDKETTEYRRIARASPPHFAL----------------------------- 469

Query: 1894 RSVGRNRQHEGLAAAIVKLWEKSSIAKIAIKRGIPNTCNERMAEEIK 2034
               GR+R+ +GLAAA+VKLWEKS+IAKIAIKRG+  TCN+RMAEE+K
Sbjct: 470  ---GRSRELQGLAAAMVKLWEKSAIAKIAIKRGVLYTCNDRMAEELK 513


>ref|XP_021747047.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
            [Chenopodium quinoa]
          Length = 900

 Score =  159 bits (402), Expect = 8e-37
 Identities = 144/414 (34%), Positives = 204/414 (49%), Gaps = 33/414 (7%)
 Frame = +1

Query: 892  ISQISSTVDASSMSDTEFDSLNVDSDLNVANQLPIRNSELRGNRRKSSFSETVSLNDSID 1071
            +S  SS  +   +  TE  S N     +V N  P +  E++ N  K + +  +  ++S  
Sbjct: 187  VSISSSIAEKKGLRKTELFSGN-----SVNNLAPEKVVEIKENVEKIAATVRLQKDNSSK 241

Query: 1072 STSSK-DYMSVPFDD-----SDSENEYSSGHGVRKLACSVSVPW--ERETDSNERQQLSN 1227
             T S+ +Y+ V   D     + SEN+       R+L     +PW  + E    +R+  S 
Sbjct: 242  VTLSRSNYVDVNGGDFRKVKAVSENDVKE----RRLD---RLPWVPDPEKADEDRRSKSK 294

Query: 1228 TELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIHDEWNETEVVKLRFEGH- 1404
            T LAE +IP+ EL RL++ ALRMKER+ VG AGVT+A+V  IHD+W   EVVKL+FEG  
Sbjct: 295  TWLAEKSIPDYELSRLRNVALRMKERIKVGAAGVTQALVDAIHDKWKIDEVVKLKFEGQS 354

Query: 1405 PV*T*REHMIF*RY*SHGPLLSHQ-------FEKLVIKL-------EVWKVSCVIQGN-- 1536
             V   R H +       G L+  +       F  L  KL       EV KV   +  +  
Sbjct: 355  TVNMKRMHEVLES--KTGGLVIWRSGCSVVLFRGLTYKLDCVQTYKEVKKVDLDVSNHPE 412

Query: 1537 ----DLSTATMRDMSEGILDTSDIDRLLDQFGPRLKDWSCRIPLPVMLTCFLV*FLITNH 1704
                D +    +   E  ++ S+++ LLD+ GPR  DWS   PLPV     L+  ++  +
Sbjct: 413  KPVPDSARIQRKLSEEESMEISELNNLLDELGPRFVDWSGPPPLPV--DADLLPAVVPGY 470

Query: 1705 HLDF----FFIRP*ELLRERQMTTLRRLARSMPPHFALVIMVFKFMEGKLSFLYI*NSHS 1872
               F    + +RP   L++ Q T  RR+AR+  PHFAL                      
Sbjct: 471  KTPFRLLPYGVRP--CLKDSQTTEYRRIARNTHPHFAL---------------------- 506

Query: 1873 YKLSLFARSVGRNRQHEGLAAAIVKLWEKSSIAKIAIKRGIPNTCNERMAEEIK 2034
                      GR+R  +GLAAA+VKLWEKS+IAKIAIKRG+ NT NERMA E+K
Sbjct: 507  ----------GRSRDLQGLAAAMVKLWEKSAIAKIAIKRGVLNTSNERMAWELK 550


>ref|XP_016666919.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like isoform X2 [Gossypium
            hirsutum]
          Length = 865

 Score =  159 bits (401), Expect = 1e-36
 Identities = 114/320 (35%), Positives = 163/320 (50%), Gaps = 39/320 (12%)
 Frame = +1

Query: 1192 ETDSNERQQLSNTELAE*TIPEPELQRLKDAALRMKERMTVGPAGVTEAVVKNIHDEWNE 1371
            E D    ++ SNTE+AE  IPE EL+RL++ ALRM ER  VG AG+T+A+V++IH+ W  
Sbjct: 237  EGDGKSGKKKSNTEMAERMIPEHELRRLRNFALRMVERTKVGAAGITQALVEHIHERWKL 296

Query: 1372 TEVVKLRFEGH-PV*T*REHMIF*RY*SHGPLLSHQFEKLVIKLEVWKVSCV--IQGNDL 1542
             EV+KL+FE    +   R H +  +      +       ++ +   +K+ CV    G D 
Sbjct: 297  DEVIKLKFEEPLSLNMKRTHEVLEKRTGGLVIWRAGGSVVLYRGMAYKLHCVQSYSGQDQ 356

Query: 1543 STATMRDM--------------------------------SEGILDTSDIDRLLDQFGPR 1626
            +  +  D+                                 E ++D  +++ LLD+ GPR
Sbjct: 357  ADTSALDVITTNTENMVVKDCVRTEESFMPSSSEYLKDLSKEELMDLCELNHLLDELGPR 416

Query: 1627 LKDWSCRIPLPVMLTCFLV*FLITNHHLDF----FFIRP*ELLRERQMTTLRRLARSMPP 1794
             KDWS R PLPV     L+  ++  +   F    + +R    L++ +MTT RRLARSMPP
Sbjct: 417  YKDWSGREPLPV--DADLLPPVVPGYQPPFRRLPYGVR--HCLKDCEMTTFRRLARSMPP 472

Query: 1795 HFALVIMVFKFMEGKLSFLYI*NSHSYKLSLFARSVGRNRQHEGLAAAIVKLWEKSSIAK 1974
            HFAL                                GRNR+ +GLA AIVKLWE+++IAK
Sbjct: 473  HFAL--------------------------------GRNRELQGLAQAIVKLWERTAIAK 500

Query: 1975 IAIKRGIPNTCNERMAEEIK 2034
            IA+KRG+ NT NERMAEE+K
Sbjct: 501  IAVKRGVENTRNERMAEELK 520


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