BLASTX nr result

ID: Cheilocostus21_contig00030922 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00030922
         (1154 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009406508.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    72   6e-10
ref|XP_009406507.1| PREDICTED: SAFB-like transcription modulator...    72   6e-10

>ref|XP_009406508.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 538

 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
 Frame = +1

Query: 892  MDVDSPDMEDGAPLKSAVDLKAHGNKDEEEETGL------IKGMQVCADQEWLCSSVPPV 1053
            M++ SP+MEDG P KS +D+ +HGN D E            +GMQVC +QE   S V PV
Sbjct: 1    MELGSPNMEDGTPFKSELDVNSHGNNDGEGTENFQNGNKEPEGMQVCVNQERPESPVLPV 60

Query: 1054 GIVGEGLHLPTIVSNSTTSSSPIDKVEEPEELP 1152
              V EGL  P  V NST S SPI+KV++ E LP
Sbjct: 61   DAVCEGLQSP--VLNSTASPSPINKVQD-ENLP 90


>ref|XP_009406507.1| PREDICTED: SAFB-like transcription modulator isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 570

 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
 Frame = +1

Query: 892  MDVDSPDMEDGAPLKSAVDLKAHGNKDEEEETGL------IKGMQVCADQEWLCSSVPPV 1053
            M++ SP+MEDG P KS +D+ +HGN D E            +GMQVC +QE   S V PV
Sbjct: 1    MELGSPNMEDGTPFKSELDVNSHGNNDGEGTENFQNGNKEPEGMQVCVNQERPESPVLPV 60

Query: 1054 GIVGEGLHLPTIVSNSTTSSSPIDKVEEPEELP 1152
              V EGL  P  V NST S SPI+KV++ E LP
Sbjct: 61   DAVCEGLQSP--VLNSTASPSPINKVQD-ENLP 90


Top