BLASTX nr result

ID: Cheilocostus21_contig00030896 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00030896
         (484 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009419742.1| PREDICTED: serine/arginine repetitive matrix...    58   8e-07

>ref|XP_009419742.1| PREDICTED: serine/arginine repetitive matrix protein 1 [Musa
           acuminata subsp. malaccensis]
          Length = 838

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
 Frame = -3

Query: 419 GDSNRVQTRSNGFESKKYPNKYAYDRDHEKSSSVRNALYKEVTKLSDSK--TVGHAPHQL 246
           G S    TRSNG++SK+  +KY+  R  EK S V + L++EV   SD K   +   PH L
Sbjct: 403 GSSRETDTRSNGYDSKRRRDKYSPKRAREKRSPVHHTLHREVVDHSDFKGNILDPLPHIL 462

Query: 245 P-CFXXXXXXXXXXXXNHGKDACAMXXXXXXXXXSPRYLTTSPL-RNRLPEISVKQTEKK 72
                            H KD             SP +L  SP  RNRL       +EK+
Sbjct: 463 TVSSRSSSPDSRDQNDIHSKDYDVPSENSSEQSDSPSHLRKSPTRRNRL-------SEKR 515

Query: 71  IPRDISGMNGDKKQATHIRERAY 3
           +P +I  +N + +++  +RE AY
Sbjct: 516 LPNNIQEINDNNEESYVVREDAY 538


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