BLASTX nr result
ID: Cheilocostus21_contig00030780
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00030780
(476 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009395134.1| PREDICTED: chloroplast stem-loop binding pro... 72 1e-11
ref|XP_020882168.1| chloroplast stem-loop binding protein of 41 ... 65 3e-09
gb|KFK35471.1| hypothetical protein AALP_AA5G288400 [Arabis alpina] 65 4e-09
gb|AAC49424.1| chloroplast mRNA-binding protein CSP41 precursor,... 65 4e-09
ref|XP_021849031.1| chloroplast stem-loop binding protein of 41 ... 65 4e-09
ref|XP_021755668.1| chloroplast stem-loop binding protein of 41 ... 64 5e-09
ref|XP_010070215.1| PREDICTED: chloroplast stem-loop binding pro... 64 7e-09
ref|XP_006291238.1| chloroplast stem-loop binding protein of 41 ... 64 9e-09
ref|NP_191873.1| chloroplast stem-loop binding protein of 41 kDa... 64 9e-09
gb|OAP04350.1| CSP41A [Arabidopsis thaliana] 64 9e-09
gb|OMP05074.1| hypothetical protein COLO4_09096 [Corchorus olito... 63 1e-08
ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding pro... 63 1e-08
gb|OMO77710.1| hypothetical protein CCACVL1_14866 [Corchorus cap... 63 1e-08
gb|PON63942.1| NAD(P)-binding domain containing protein [Trema o... 63 1e-08
gb|PON55279.1| NAD(P)-binding domain containing protein [Paraspo... 63 1e-08
ref|XP_015087731.1| PREDICTED: chloroplast stem-loop binding pro... 63 1e-08
ref|XP_010468882.1| PREDICTED: chloroplast stem-loop binding pro... 63 1e-08
ref|XP_008790965.1| PREDICTED: chloroplast stem-loop binding pro... 63 1e-08
ref|XP_010413195.1| PREDICTED: chloroplast stem-loop binding pro... 63 1e-08
gb|AAD21574.3| mRNA binding protein precursor [Solanum lycopersi... 63 1e-08
>ref|XP_009395134.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 400
Score = 71.6 bits (174), Expect = 1e-11
Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = -1
Query: 227 LTRLLVPSTPFASPSTTRISYRRXXXXXXXXXXXXXXSVKAAAAT-DKKSVLIVNTNSGG 51
LT + F SP+ T++S+ R S+KAAAA DKK VL+VNTNSGG
Sbjct: 25 LTHRSLSFVAFTSPTITKLSFHRSSRRFSSAPSTSVFSIKAAAAAADKKRVLVVNTNSGG 84
Query: 50 HAVIGFYFAKELLSSG 3
HAVIGFYFA++LLSSG
Sbjct: 85 HAVIGFYFAQQLLSSG 100
>ref|XP_020882168.1| chloroplast stem-loop binding protein of 41 kDa a, chloroplastic
[Arabidopsis lyrata subsp. lyrata]
gb|EFH54757.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata]
Length = 408
Score = 65.1 bits (157), Expect = 3e-09
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
VKA++ DKK+VLIVNTNSGGHAVIGFYFAKELLS+G
Sbjct: 73 VKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAG 109
>gb|KFK35471.1| hypothetical protein AALP_AA5G288400 [Arabis alpina]
Length = 403
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
VKA++ +KK+VLIVNTNSGGHAVIGFYFAKELLSSG
Sbjct: 68 VKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSSG 104
>gb|AAC49424.1| chloroplast mRNA-binding protein CSP41 precursor, partial [Spinacia
oleracea]
Length = 415
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
+ A+ +TDKK VLIVNTNSGGHAVIGFYFAKELL SG
Sbjct: 81 INASTSTDKKKVLIVNTNSGGHAVIGFYFAKELLGSG 117
>ref|XP_021849031.1| chloroplast stem-loop binding protein of 41 kDa a, chloroplastic
[Spinacia oleracea]
gb|KNA07372.1| hypothetical protein SOVF_172470 [Spinacia oleracea]
Length = 418
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
+ A+ +TDKK VLIVNTNSGGHAVIGFYFAKELL SG
Sbjct: 84 INASTSTDKKKVLIVNTNSGGHAVIGFYFAKELLGSG 120
>ref|XP_021755668.1| chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Chenopodium quinoa]
Length = 416
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = -1
Query: 104 AAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
A+A+DKK VLIVNTNSGGHAVIGFYFAKELLSSG
Sbjct: 85 ASASDKKRVLIVNTNSGGHAVIGFYFAKELLSSG 118
>ref|XP_010070215.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic [Eucalyptus grandis]
gb|KCW58849.1| hypothetical protein EUGRSUZ_H01479 [Eucalyptus grandis]
Length = 405
Score = 63.9 bits (154), Expect = 7e-09
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = -1
Query: 104 AAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
AAA DKK VLIVNTNSGGHA+IGFYFAKELL+SG
Sbjct: 73 AAAADKKKVLIVNTNSGGHAIIGFYFAKELLASG 106
>ref|XP_006291238.1| chloroplast stem-loop binding protein of 41 kDa a, chloroplastic
[Capsella rubella]
gb|EOA24136.1| hypothetical protein CARUB_v10017370mg [Capsella rubella]
Length = 404
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
VKA++ +KK+VLIVNTNSGGHAVIGFYFAKELLS+G
Sbjct: 69 VKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAG 105
>ref|NP_191873.1| chloroplast stem-loop binding protein of 41 kDa [Arabidopsis
thaliana]
sp|Q9LYA9.1|CP41A_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic; Short=CSP41-a; Flags: Precursor
gb|AAL16101.1|AF428269_1 AT3g63140/T20O10_240 [Arabidopsis thaliana]
emb|CAB87759.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gb|AAL24369.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gb|AAM91204.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gb|AEE80440.1| chloroplast stem-loop binding protein of 41 kDa [Arabidopsis
thaliana]
Length = 406
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
VKA++ +KK+VLIVNTNSGGHAVIGFYFAKELLS+G
Sbjct: 71 VKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAG 107
>gb|OAP04350.1| CSP41A [Arabidopsis thaliana]
Length = 407
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
VKA++ +KK+VLIVNTNSGGHAVIGFYFAKELLS+G
Sbjct: 72 VKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAG 108
>gb|OMP05074.1| hypothetical protein COLO4_09096 [Corchorus olitorius]
Length = 401
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = -1
Query: 104 AAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
A+A DKK VLIVNTNSGGHAVIGFYFAKELL+SG
Sbjct: 69 ASAADKKKVLIVNTNSGGHAVIGFYFAKELLASG 102
>ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic [Solanum tuberosum]
Length = 401
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
V+A+ A +KK VLIVNTNSGGHAVIGFYFAKELL SG
Sbjct: 66 VQASGAVEKKKVLIVNTNSGGHAVIGFYFAKELLGSG 102
>gb|OMO77710.1| hypothetical protein CCACVL1_14866 [Corchorus capsularis]
Length = 402
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = -1
Query: 104 AAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
A+A DKK VLIVNTNSGGHAVIGFYFAKELL+SG
Sbjct: 70 ASAADKKKVLIVNTNSGGHAVIGFYFAKELLASG 103
>gb|PON63942.1| NAD(P)-binding domain containing protein [Trema orientalis]
Length = 403
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = -1
Query: 104 AAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
A+AT+KK VLIVNTNSGGHAVIGFYFAKELL SG
Sbjct: 71 ASATEKKKVLIVNTNSGGHAVIGFYFAKELLGSG 104
>gb|PON55279.1| NAD(P)-binding domain containing protein [Parasponia andersonii]
Length = 403
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = -1
Query: 104 AAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
A+AT+KK VLIVNTNSGGHAVIGFYFAKELL SG
Sbjct: 71 ASATEKKKVLIVNTNSGGHAVIGFYFAKELLGSG 104
>ref|XP_015087731.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic [Solanum pennellii]
Length = 404
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
V+A+ A +KK VLIVNTNSGGHAVIGFYFAKELL SG
Sbjct: 69 VQASGAVEKKKVLIVNTNSGGHAVIGFYFAKELLGSG 105
>ref|XP_010468882.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Camelina sativa]
Length = 405
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
VKA++ +KK+VLIVNTNSGGHAVIGFYFAKELLS+G
Sbjct: 70 VKASSLGEKKNVLIVNTNSGGHAVIGFYFAKELLSAG 106
>ref|XP_008790965.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic [Phoenix dactylifera]
Length = 405
Score = 63.2 bits (152), Expect = 1e-08
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = -1
Query: 206 STPFASPSTTRISYRRXXXXXXXXXXXXXXSVKAAAATDKKSVLIVNTNSGGHAVIGFYF 27
S+PF SPS S R VKA A +KK VL+VNTNSGGHAVIGFYF
Sbjct: 45 SSPFTSPSFYPTSKR-------FSSPSSNFYVKAVAQEEKKKVLVVNTNSGGHAVIGFYF 97
Query: 26 AKELLSSG 3
A++LL SG
Sbjct: 98 ARQLLGSG 105
>ref|XP_010413195.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic [Camelina sativa]
Length = 406
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
VKA++ +KK+VLIVNTNSGGHAVIGFYFAKELLS+G
Sbjct: 71 VKASSLGEKKNVLIVNTNSGGHAVIGFYFAKELLSAG 107
>gb|AAD21574.3| mRNA binding protein precursor [Solanum lycopersicum]
Length = 407
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 113 VKAAAATDKKSVLIVNTNSGGHAVIGFYFAKELLSSG 3
V+A+ A +KK VLIVNTNSGGHAVIGFYFAKELL SG
Sbjct: 72 VQASGAVEKKKVLIVNTNSGGHAVIGFYFAKELLGSG 108