BLASTX nr result
ID: Cheilocostus21_contig00030747
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00030747
(971 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020096969.1| uncharacterized protein LOC109716078, partia... 80 2e-20
gb|OAY74722.1| putative ribonuclease H protein [Ananas comosus] 80 2e-20
dbj|GAU35685.1| hypothetical protein TSUD_162570 [Trifolium subt... 64 8e-12
ref|XP_020088996.1| uncharacterized protein LOC109710675 [Ananas... 62 1e-11
gb|PRQ37611.1| putative reverse transcriptase zinc-binding domai... 62 3e-10
ref|XP_023908468.1| uncharacterized protein LOC112020138 [Quercu... 52 5e-10
dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subt... 57 8e-10
ref|XP_023880912.1| uncharacterized protein LOC111993298 [Quercu... 50 3e-09
gb|PRQ33081.1| putative RNA-directed DNA polymerase [Rosa chinen... 49 3e-08
ref|XP_020112154.1| uncharacterized protein LOC109726772 [Ananas... 51 8e-08
gb|OVA12650.1| Reverse transcriptase zinc-binding domain [Maclea... 57 2e-07
gb|PNX91317.1| ribonuclease H, partial [Trifolium pratense] 57 2e-07
gb|PKU87614.1| Putative ribonuclease H protein [Dendrobium caten... 45 3e-07
gb|OAY82706.1| putative ribonuclease H protein [Ananas comosus] 51 3e-07
ref|XP_019163494.1| PREDICTED: uncharacterized protein LOC109159... 51 1e-06
ref|XP_010689378.1| PREDICTED: uncharacterized protein LOC104903... 61 1e-06
ref|XP_020109325.1| uncharacterized protein LOC109724810 [Ananas... 48 2e-06
ref|XP_019186483.1| PREDICTED: uncharacterized protein LOC109181... 48 8e-06
ref|XP_024042834.1| uncharacterized protein LOC112099643 [Citrus... 59 8e-06
gb|KYP45885.1| Putative ribonuclease H protein At1g65750 family ... 48 9e-06
>ref|XP_020096969.1| uncharacterized protein LOC109716078, partial [Ananas comosus]
Length = 1220
Score = 79.7 bits (195), Expect(3) = 2e-20
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 2/198 (1%)
Frame = +2
Query: 266 WVRVSRAKYYIIDPWNPLPQRKSSRA*KALIVDLKLIKSYLSKCINDRNDTHXXXXXXXX 445
WVR+ + KY +DPW +S A +AL ++ IK L I+D +T+
Sbjct: 901 WVRIMKGKYGELDPWKNPKLTTTSWAWRALNYTVQAIKLGLQISISDGLNTNFLEHPWLF 960
Query: 446 XXXXFQ--TYFIDIRAIPNQQVSSLILNNSWDVSIIQCWGN*KIVQAISNIAFPSLPDVD 619
+ T+ Q ++ +I N W + I+ +V AI+N+ PD
Sbjct: 961 TTPFSKKPTFIATNIGEKVQHINQIIENGEWCYNSIEGLVGEDLVDAITNLQLGEGPD-- 1018
Query: 620 RWFWNENSHGLPITKCVYRSLLNHTNPSIVSWPGWEILWKLIISAKIKIFGWKLIHHKLQ 799
+W W+ + G VY L HT+ W GW+ LW L ++ ++K F WK +L
Sbjct: 1019 KWVWSLHPQGKARAGSVYSFLNGHTDNC---WDGWKQLWGLAVAPRVKTFLWKYFWKRLP 1075
Query: 800 TLDTLAKLGFHGPNICVV 853
T D L + G N+C +
Sbjct: 1076 TKDFLQQRGLTQSNLCAL 1093
Score = 39.3 bits (90), Expect(3) = 2e-20
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 88 LIRSFIWGKNNAKKGLHLIKWETLLRP 168
+IR F+W K+ KKG+HLI W+ + +P
Sbjct: 841 IIRKFLWEKHGGKKGMHLIAWDNITKP 867
Score = 29.6 bits (65), Expect(3) = 2e-20
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +3
Query: 840 ISVLCKQDEESCEHLFYKCAFTKDILEYLEMQFYGKYL 953
+ LC + E+ +HLF++C ++K++ ++ +GK +
Sbjct: 1090 LCALCGEAAENIQHLFFQCRYSKEVWHIFQLD-WGKVI 1126
>gb|OAY74722.1| putative ribonuclease H protein [Ananas comosus]
Length = 851
Score = 79.7 bits (195), Expect(3) = 2e-20
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 2/198 (1%)
Frame = +2
Query: 266 WVRVSRAKYYIIDPWNPLPQRKSSRA*KALIVDLKLIKSYLSKCINDRNDTHXXXXXXXX 445
WVR+ + KY +DPW +S A +AL ++ IK L I+D +T+
Sbjct: 374 WVRIMKGKYGELDPWKNPKLTTTSWAWRALNYTVQAIKLGLQISISDGLNTNFLEHPWLF 433
Query: 446 XXXXFQ--TYFIDIRAIPNQQVSSLILNNSWDVSIIQCWGN*KIVQAISNIAFPSLPDVD 619
+ T+ Q ++ +I N W + I+ +V AI+N+ PD
Sbjct: 434 TTPFSKKPTFIATNIGEKVQHINQIIENGEWCYNSIEGLVGEDLVDAITNLQLGEGPD-- 491
Query: 620 RWFWNENSHGLPITKCVYRSLLNHTNPSIVSWPGWEILWKLIISAKIKIFGWKLIHHKLQ 799
+W W+ + G VY L HT+ W GW+ LW L ++ ++K F WK +L
Sbjct: 492 KWVWSLHPQGKARAGSVYSFLNGHTDNC---WDGWKQLWGLAVAPRVKTFLWKYFWKRLP 548
Query: 800 TLDTLAKLGFHGPNICVV 853
T D L + G N+C +
Sbjct: 549 TKDFLQQRGLTQSNLCAL 566
Score = 39.3 bits (90), Expect(3) = 2e-20
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 88 LIRSFIWGKNNAKKGLHLIKWETLLRP 168
+IR F+W K+ KKG+HLI W+ + +P
Sbjct: 314 IIRKFLWEKHGGKKGMHLIAWDNITKP 340
Score = 29.6 bits (65), Expect(3) = 2e-20
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +3
Query: 840 ISVLCKQDEESCEHLFYKCAFTKDILEYLEMQFYGKYL 953
+ LC + E+ +HLF++C ++K++ ++ +GK +
Sbjct: 563 LCALCGEAAENIQHLFFQCRYSKEVWHIFQLD-WGKVI 599
>dbj|GAU35685.1| hypothetical protein TSUD_162570 [Trifolium subterraneum]
Length = 1375
Score = 63.9 bits (154), Expect(3) = 8e-12
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Frame = +2
Query: 254 CDNIWVRVSRAKYYIIDPWNPLPQRKSSRA*KALIVDLKLIKSYLSKCINDRNDTHXXXX 433
CD +WV+V R KY D + + ++ S A++ L+ +K + D N +
Sbjct: 1015 CDTLWVQVLRHKYLNDDMFFSITKKSGSITWNAIMKALQALKDGFQFRLGDGNSSFWYSN 1074
Query: 434 XXXXXXXXFQTYFIDIRAIPNQQVSSLILNNSWDVSIIQCWGN*KIVQAISNIAFP-SLP 610
Q ++DI + +V + NN W+ +++ ++ + + +
Sbjct: 1075 WSGIGNLADQVPYVDIHDL-QMRVRDVYTNNKWNFNLLYTTIPADVMDHVKRLPVCLNSQ 1133
Query: 611 DVDRWFWNENSHGLPITKCVY----RSLLNHTNPSIVSWPGWEILWKLIISAKIKIFGWK 778
VDR+ W N +GL K Y R + T+ +SW W +W + KIK F W
Sbjct: 1134 VVDRYTWKGNLNGLYTAKEGYYWLNRFAFSDTDTDDISW-NW--VWHIPAPEKIKFFIWS 1190
Query: 779 LIHHKLQTLDTLAKLGFHGPNIC 847
+H+ L T L+ G N+C
Sbjct: 1191 ALHNALPTKSMLSHRGLLQANLC 1213
Score = 34.7 bits (78), Expect(3) = 8e-12
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 46 PQVSLDLSSKS*NALIRSFIWGKNNAKKGLHLIKWETLLRPKE 174
PQ + D S + + RSF+W K + KG+HL+ W+ + +PK+
Sbjct: 950 PQTTCD----SIDRMTRSFLW-KGASNKGIHLVGWDKITKPKK 987
Score = 20.4 bits (41), Expect(3) = 8e-12
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3
Query: 852 CKQDEESCEHLFYKCAFTK 908
C +EES H C F K
Sbjct: 1216 CNIEEESTLHCLRNCEFIK 1234
>ref|XP_020088996.1| uncharacterized protein LOC109710675 [Ananas comosus]
Length = 1113
Score = 62.0 bits (149), Expect(2) = 1e-11
Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 6/202 (2%)
Frame = +2
Query: 263 IWVRVSRAKYYIIDPWNPLPQR--KSSRA*KALIVDLKLIKSYLSKCINDRNDTHXXXXX 436
+WV++ R KY PW ++ K S KAL V + +I+ + K I D DT
Sbjct: 635 LWVKLVRDKYRGFHPWKFTDRKYKKCSPIFKALRVTMHVIRDGMCKLIGDGKDTTIWDDP 694
Query: 437 XXXXXXX-FQTYFIDIRA-IPNQQVSSLILNNSWDVSIIQCWGN*KIVQAISNIAFPSLP 610
++ +I++ ++V+ LI +W+ + W + I I
Sbjct: 695 WIFSIPLSWKPTYINMNVRFGKKKVARLIRAGNWNYDRLVEWFGPILAHNICKIILSPDN 754
Query: 611 DVDRWFWNENSHGLPITKCVYRSLLNHTNPS--IVSWPGWEILWKLIISAKIKIFGWKLI 784
D W W G P K +Y +H N + W +LW L ++ ++K F WKL+
Sbjct: 755 GSDEWIWAPKKDGKPSVKSIY----HHINQGFYVPQATKWIVLWSLPVAPRVKNFLWKLL 810
Query: 785 HHKLQTLDTLAKLGFHGPNICV 850
++L T + L C+
Sbjct: 811 WNRLPTNERCYSLNSAPSPFCI 832
Score = 36.6 bits (83), Expect(2) = 1e-11
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 91 IRSFIWGKNNAKKGLHLIKWETL 159
IR F+W K N KK LHL+KW+++
Sbjct: 577 IRDFLWEKRNNKKSLHLLKWDSV 599
>gb|PRQ37611.1| putative reverse transcriptase zinc-binding domain-containing
protein [Rosa chinensis]
Length = 308
Score = 62.4 bits (150), Expect(2) = 3e-10
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +2
Query: 497 QQVSSLILNNSWDVSIIQCWGN*KIVQAISNIAFPSLPDVDRWFWNENSHGLPITKCV-- 670
+ V+ I+N WD + + + IV+ I +I P D + W +S+G K
Sbjct: 159 ESVAESIINGKWDKAKLAFVLDPNIVKQILSIPLPVCEQEDEYIWGPSSNGKFSIKSATW 218
Query: 671 --YRSLLNHTNPSIVSWPGWEILWKLIISAKIKIFGWKLIHHKLQTLDTLAKLGFHGPNI 844
Y L H+ +++ LWKL + KIKIFGW L+ +L+T D L++ G N
Sbjct: 219 LQYDHLRKHSQSKLINK-----LWKLNVQPKIKIFGWLLLRGRLKTRDRLSRFGIINDNS 273
Query: 845 CVV 853
C++
Sbjct: 274 CLL 276
Score = 32.0 bits (71), Expect(2) = 3e-10
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 846 VLCKQDEESCEHLFYKCAFTKDI 914
+LC +D E+ +HLF C FTK++
Sbjct: 275 LLCNRDNETADHLFGYCEFTKEV 297
>ref|XP_023908468.1| uncharacterized protein LOC112020138 [Quercus suber]
Length = 1087
Score = 51.6 bits (122), Expect(3) = 5e-10
Identities = 49/196 (25%), Positives = 77/196 (39%), Gaps = 9/196 (4%)
Frame = +2
Query: 260 NIWVRVSRAKYYIIDPWNPLPQRKSSRA*KALIVDLKLIKSYLSKCINDRNDTHXXXXXX 439
+++ RV +AKY+ S A +++I K+I + I D +
Sbjct: 699 SLFYRVFKAKYFPRGSIFEASTTTGSYAWQSIIKSRKVILMGMRWRIGDGKSINIYGENW 758
Query: 440 XXXXXXFQTYFIDIRAIPNQQVSSLILNN--SWDVSIIQCWGN*KIVQAISNIAFPSLPD 613
+ + A+ QV++LI N SW++ ++ V I I
Sbjct: 759 LPGKGSARIVSPQVAALKGAQVAALINPNTRSWNIDLLNQHFLSFEVTRIKAIPLSWTEQ 818
Query: 614 VDRWFWNENSHGLPITKCVYRSLLNHTNPSIVSWPG-------WEILWKLIISAKIKIFG 772
DR W +N G + K Y+ L N S S W+ LWKL + KIK F
Sbjct: 819 EDRLIWPDNHDGEYLVKSGYQMLCKEANSSAASSSDSSHRSAFWKRLWKLHVPNKIKFFL 878
Query: 773 WKLIHHKLQTLDTLAK 820
W++ + L T D L K
Sbjct: 879 WRVCSNTLPTKDNLKK 894
Score = 38.1 bits (87), Expect(3) = 5e-10
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 85 ALIRSFIWGKNNAKKGLHLIKWETLLRPK 171
ALIR F WGK ++ +H KWE L +PK
Sbjct: 640 ALIRKFFWGKKGEQRKIHWKKWEVLCQPK 668
Score = 23.1 bits (48), Expect(3) = 5e-10
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 852 CKQDEESCEHLFYKCAFTKDI 914
C QD+E+ H + C K+I
Sbjct: 906 CLQDQETAFHALWSCESLKEI 926
>dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subterraneum]
Length = 545
Score = 56.6 bits (135), Expect(3) = 8e-10
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 5/203 (2%)
Frame = +2
Query: 254 CDNIWVRVSRAKYYIIDPWNPLPQRKSSRA*KALIVDLKLIKSYLSKCINDRNDTHXXXX 433
CD W+++ R KY D + + ++ S A++ L+ +K + D N +
Sbjct: 72 CDTFWLQILRHKYLNDDMFLSITKKPGSITWNAIMKALQALKDGFQFRLGDGNSSFWYLN 131
Query: 434 XXXXXXXXFQTYFIDIRAIPNQQVSSLILNNSWDVSIIQCWGN*KIVQAISNIAFP-SLP 610
Q ++DI + +V + +N W+ +++ ++ + + +
Sbjct: 132 WLGIGNLADQVPYVDIHDL-QMRVRDVYTDNKWNFNLLYTTIPADVMDHLKRLPVCLNSQ 190
Query: 611 DVDRWFWNENSHGLPITKCVY----RSLLNHTNPSIVSWPGWEILWKLIISAKIKIFGWK 778
VDR+ W N +GL K Y R + T +SW +W + KIK F W
Sbjct: 191 VVDRYTWKGNLNGLYTAKEGYYWLNRFSFSDTATDDISWNS---VWHIPAPEKIKFFIWS 247
Query: 779 LIHHKLQTLDTLAKLGFHGPNIC 847
+H+ L T L+ G N+C
Sbjct: 248 ALHNALPTKSMLSHRGLLQANLC 270
Score = 35.0 bits (79), Expect(3) = 8e-10
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 46 PQVSLDLSSKS*NALIRSFIWGKNNAKKGLHLIKWETLLRPKE 174
PQ + D S + + RSF+W K+ + KG+HL+ W+ + +PK+
Sbjct: 7 PQTTCD----SIDRMTRSFLW-KDASNKGIHLVGWDKITKPKK 44
Score = 20.4 bits (41), Expect(3) = 8e-10
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3
Query: 852 CKQDEESCEHLFYKCAFTK 908
C +EES H C F K
Sbjct: 273 CNIEEESTLHCLRNCEFIK 291
>ref|XP_023880912.1| uncharacterized protein LOC111993298 [Quercus suber]
Length = 1163
Score = 50.4 bits (119), Expect(3) = 3e-09
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 9/196 (4%)
Frame = +2
Query: 260 NIWVRVSRAKYYIIDPWNPLPQRKSSRA*KALIVDLKLIKSYLSKCINDRNDTHXXXXXX 439
+++ RV +AKY+ S A +++I K+I + I D +
Sbjct: 685 SLFYRVFKAKYFPRGSIFEASTITGSYAWQSIIKSRKVILMGMRWRIGDGKSINIYEENW 744
Query: 440 XXXXXXFQTYFIDIRAIPNQQVSSLILNN--SWDVSIIQCWGN*KIVQAISNIAFPSLPD 613
+ + A+ QV++LI N SW++ ++ V I+ I
Sbjct: 745 LPGKGSARIVSPQVAALKGAQVAALINPNTRSWNIDLLNQHFLSFEVTRINAIPLSWTEQ 804
Query: 614 VDRWFWNENSHGLPITKCVYRSLLNHTNPSIVSWPG-------WEILWKLIISAKIKIFG 772
DR W E+ G + K Y+ L N S S W+ LWKL + KIK F
Sbjct: 805 EDRLIWPESHDGEYLVKSGYQMLCKEANSSAASCSDSSHRSAFWKRLWKLHVPNKIKFFL 864
Query: 773 WKLIHHKLQTLDTLAK 820
W++ + L T D L K
Sbjct: 865 WRVCSNVLPTKDNLKK 880
Score = 36.6 bits (83), Expect(3) = 3e-09
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 85 ALIRSFIWGKNNAKKGLHLIKWETLLRPK 171
ALIR F WG+ ++ +H KWE L +PK
Sbjct: 626 ALIRKFFWGQKGEQRKIHWKKWEVLCQPK 654
Score = 23.1 bits (48), Expect(3) = 3e-09
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 852 CKQDEESCEHLFYKCAFTKDI 914
C QD+E+ H + C K+I
Sbjct: 892 CLQDQETAFHALWSCESLKEI 912
>gb|PRQ33081.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1367
Score = 48.9 bits (115), Expect(2) = 3e-08
Identities = 47/215 (21%), Positives = 73/215 (33%), Gaps = 6/215 (2%)
Frame = +2
Query: 176 GGLYMKYLVLMRPTXXXXXXXXXXXXCDNIWVRVSRAKYY----IIDPWNPLPQRKSSRA 343
GGL +K +M +W + KY ++D N LP S
Sbjct: 850 GGLGIKKTEVMNQAMLAKASWRLFINDSGLWANIYSKKYLKDCSLLDE-NYLPPSDCSST 908
Query: 344 *KALIVDLKLIKSYLSKCINDRNDTHXXXXXXXXXXXXFQTYFIDIRAIPNQQVSSLILN 523
++++ L+K L + D PN + +
Sbjct: 909 WRSIVHGASLLKKNLKWRVGDGKTIKFWSDSWILPNALINFALPSAHINPNATICDFWND 968
Query: 524 NSWDVSIIQCWGN*KIVQAISNI--AFPSLPDVDRWFWNENSHGLPITKCVYRSLLNHTN 697
WD+ ++ +I+ I N+ F D D W S+G K Y S + +
Sbjct: 969 TGWDLDLLSSVVPNEIISLIINVPTGFEGCGD-DTLIWGATSNGCFTVKSAYSSTFDFS- 1026
Query: 698 PSIVSWPGWEILWKLIISAKIKIFGWKLIHHKLQT 802
V P W+ LWKL K+ F W + H KL T
Sbjct: 1027 ---VQNPQWKTLWKLNCPPKLMTFIWTVFHRKLLT 1058
Score = 38.5 bits (88), Expect(2) = 3e-08
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1
Query: 25 PLFTI*YPQVSLDLSSKS*NALIRSFIWGKNNAKKGLHLIKWETLLRPKE 174
P++T+ ++ + L K + L R FIWG +K +HL+ W+ + +PK+
Sbjct: 800 PIYTMQTAKLPMSLCDKL-DKLNRDFIWGDTTDRKKIHLVSWDVVCQPKQ 848
>ref|XP_020112154.1| uncharacterized protein LOC109726772 [Ananas comosus]
Length = 748
Score = 51.2 bits (121), Expect(2) = 8e-08
Identities = 31/91 (34%), Positives = 44/91 (48%)
Frame = +2
Query: 581 ISNIAFPSLPDVDRWFWNENSHGLPITKCVYRSLLNHTNPSIVSWPGWEILWKLIISAKI 760
IS++ PD W W+ N GL K Y +L + PG ++WKL I K+
Sbjct: 555 ISHLTILQRPDKLTWRWSPN--GLFSVKSTYLALTDGGTRD----PGLNLIWKLYIPLKV 608
Query: 761 KIFGWKLIHHKLQTLDTLAKLGFHGPNICVV 853
K+F W + +L T D L K G+ G CV+
Sbjct: 609 KVFCWLTLKKRLPTTDLLVKRGWVGNVHCVL 639
Score = 34.7 bits (78), Expect(2) = 8e-08
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 846 VLCKQDEESCEHLFYKCAFTKDIL 917
VLC D ES +HLF KC FTK I+
Sbjct: 638 VLCGADAESVDHLFTKCVFTKFII 661
>gb|OVA12650.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
Length = 593
Score = 57.0 bits (136), Expect(2) = 2e-07
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 8/227 (3%)
Frame = +2
Query: 167 PKN-GGLYMKYLVLMRPTXXXXXXXXXXXXCDNIWVRVSRAKYY-IIDPWNPLPQRKSSR 340
PK+ GGL K L L + D +WV+V + KY+ P NP+ R+ S
Sbjct: 47 PKSVGGLGFKNLQLFNKSLMAKLAWRMLTEQDQLWVKVLKHKYFPSSSPLNPIQVRQGSW 106
Query: 341 A*KALIVDLKLIKSYLSKCINDRNDTHXXXXXXXXXXXXFQTYFIDIRAIPNQQVSSLIL 520
K + L++++ + + H + + V+ LI
Sbjct: 107 VWKGIQQGLEVVQQLYIWEVKNGESIHIWKDAWIPGVLPNTLPIPQNQGLIPYMVADLIF 166
Query: 521 NNS--WDVSIIQCWGN*KIVQAISNIAFPSLPDVDRWFWNENSHGLPITKCVYRSLLNHT 694
+NS W+ +I+ +I I +I P L DR W G K Y L T
Sbjct: 167 HNSKQWNRDLIETVFEPEIASKILSIRLP-LQGCDRIHWKPVKKGCFTVKSTYLELTQPT 225
Query: 695 NPSIVSWPG---WEILWKL-IISAKIKIFGWKLIHHKLQTLDTLAKL 823
+ ++ G W ++WKL I+ ++++F WK ++ L T ++ +
Sbjct: 226 SQQAITSNGFNQWNLIWKLPTINPRVRLFLWKCLNDLLPTKTKISSI 272
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 94 RSFIWGKNNAKKGLHLIKWETLLRPK 171
R + WGK++ K GL+L W + +PK
Sbjct: 24 RDYWWGKDSPK-GLYLKSWSAICKPK 48
>gb|PNX91317.1| ribonuclease H, partial [Trifolium pratense]
Length = 232
Score = 56.6 bits (135), Expect(2) = 2e-07
Identities = 32/125 (25%), Positives = 56/125 (44%)
Frame = +2
Query: 473 IDIRAIPNQQVSSLILNNSWDVSIIQCWGN*KIVQAISNIAFPSLPDVDRWFWNENSHGL 652
ID+ + N V +I+N W + +I + I + PS+P D W E+ GL
Sbjct: 62 IDVGNLQNAMVEDIIVNGEWRIPLIVQQIAPLLASEIRGLTIPSIPTPDSLIWEESISGL 121
Query: 653 PITKCVYRSLLNHTNPSIVSWPGWEILWKLIISAKIKIFGWKLIHHKLQTLDTLAKLGFH 832
K Y + +++ P P +++W I+ + W++ H+ + T D L K GF
Sbjct: 122 MSFKDAYMNRASNSQPL----PWCKLIWSPIVQPARTLVLWRIFHNIIATDDNLRKRGFL 177
Query: 833 GPNIC 847
+ C
Sbjct: 178 MVSCC 182
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 831 MVLISVLCKQDEESCEHLFYKCAF 902
MV LC Q E+ +HLF++C F
Sbjct: 178 MVSCCSLCNQAYETSQHLFFECPF 201
>gb|PKU87614.1| Putative ribonuclease H protein [Dendrobium catenatum]
Length = 521
Score = 45.4 bits (106), Expect(2) = 3e-07
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
Frame = +2
Query: 167 PKN-GGLYMKYLVLMRPTXXXXXXXXXXXXCDNIWVRVSRAKYYIIDPWNPLPQRKSSRA 343
PKN GGL ++ L D ++ RV RAKY + N ++ +S+A
Sbjct: 267 PKNMGGLGLQSPTLKTGPLRANLSWNFLQKPDTLFHRVMRAKYGN-NILNGTHKKSTSKA 325
Query: 344 *KALIVDLKLIKSYLSKCINDRNDTHXXXXXXXXXXXXFQTY-FIDIRAIPNQQVSSLIL 520
+ L+ K +K+ I + D + Q F D A+ V L+L
Sbjct: 326 WRILLDGGKSLKNITRWNIGNGKDINVLNDSWIYDKSINQWLTFADCSALEGLCVQHLML 385
Query: 521 NNS-WDVSIIQCWGN*KIVQAISNIAFPS----LPDVDRWFWNENSHGLPITKCVYRSLL 685
+N W+ +++Q W + ++V+ ISNI S + ++ + GL K V R
Sbjct: 386 DNGQWNSNLLQNWFHPELVKVISNIQINSSNVDMLEMQNFCPGRTISGLAFEK-VLRRKF 444
Query: 686 NHTNPSIVSWPGWEILWKLIISAKIKIFGWKLIHHKLQT 802
N T+ +W L KL +S K+++F W+L + + T
Sbjct: 445 NLTDDGYYNW-----LKKLKLSKKVEMFWWRLGNASIPT 478
Score = 38.5 bits (88), Expect(2) = 3e-07
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 88 LIRSFIWGKNNAKKGLHLIKWETLLRPK 171
L RSFIW K++ G+H I WE L +PK
Sbjct: 241 LCRSFIWDKHDGSHGIHYIAWEDLCKPK 268
>gb|OAY82706.1| putative ribonuclease H protein [Ananas comosus]
Length = 200
Score = 50.8 bits (120), Expect(2) = 3e-07
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +2
Query: 566 KIVQAISNIAFPSLPDVDRWFWNENSHGLPITKCVYRSLLNH-TNPSIVSWPGWEILWKL 742
++V+ IS + PD+ +W W+ + H K Y +L + T + S+ +WKL
Sbjct: 47 ELVERISLFSVEHRPDMIQWRWSADGHFS--IKSTYSALTDGGTRDARASY-----IWKL 99
Query: 743 IISAKIKIFGWKLIHHKLQTLDTLAKLGFHGPNICVV 853
I K+K+F W ++ ++ T DTL K G+ +ICV+
Sbjct: 100 KIPLKVKVFSWLVLKKRMLTRDTLVKRGWLDDSICVL 136
Score = 33.1 bits (74), Expect(2) = 3e-07
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3
Query: 840 ISVLCKQDEESCEHLFYKCAFTKDIL 917
I VLC EES +HLF +C F K IL
Sbjct: 133 ICVLCGSGEESVDHLFTRCVFCKFIL 158
>ref|XP_019163494.1| PREDICTED: uncharacterized protein LOC109159838 [Ipomoea nil]
Length = 1628
Score = 50.8 bits (120), Expect(2) = 1e-06
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
Frame = +2
Query: 257 DNIWVRVSRAKYYIIDPW-NPLPQRKSSRA*KALIVDLKLIKSYLSKCINDRNDTHXXXX 433
D++ RV +A+YY + + + S ++++ +L+KS + I + TH
Sbjct: 1163 DSLVARVFKARYYPTTSFFDAVIGGNPSYVWRSIMASQELVKSGCKRRIGNGKSTHVWSH 1222
Query: 434 XXXXXXXXFQTYFIDIRAIPNQQVSSLILNN--SWDVSIIQCWGN*KIVQAISNIAFPSL 607
I N VS LI + SW++ +Q + + I + +
Sbjct: 1223 PWLPGTQGTLVLASQTGLIQNMLVSDLIDVDLCSWNIPYVQQLFDPHVASQIVQLPVNLM 1282
Query: 608 PDVDRWFWNENSHGLPITKCVYRSLLN-HTNPSIVSWPGWEILWKLIISAKIKIFGWKLI 784
D D W+W + G K Y+ L H S+V W +W+L I K K W+ +
Sbjct: 1283 HD-DLWYWEGDLRGCYSVKDGYKRLGEVHAQGSVV----WNGIWRLNIPPKWKNLMWRAL 1337
Query: 785 HHKLQTLDTLAKLGFHGPNIC 847
+ L TLD L K NIC
Sbjct: 1338 SNILPTLDNLIKRRVDLMNIC 1358
Score = 31.2 bits (69), Expect(2) = 1e-06
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 88 LIRSFIWGKNNAKKGLHLIKWETLLRPKE 174
L+ + WG+N+ + G+H W+ + +PK+
Sbjct: 1106 LMNRYWWGRNDREDGIHWYAWDRMCKPKK 1134
>ref|XP_010689378.1| PREDICTED: uncharacterized protein LOC104903087 [Beta vulgaris subsp.
vulgaris]
Length = 948
Score = 61.2 bits (147), Expect = 1e-06
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Frame = +2
Query: 503 VSSLILNNSWDVSIIQCWGN*KIVQAISNIAFPSLPDVDRWFWNENSHGLPITKCVYRSL 682
V+ LI + W++ ++Q W V AI+ I P+ P D W W+ + G + Y
Sbjct: 810 VADLITDGKWNLQLLQVWFTKWEVDAITRIPIPTFPCADGWAWHHSKKGNYTVRSAYHVE 869
Query: 683 LNHTNPSIVSWPG------WEILWKLIISAKIKIFGWKLIHHKLQTLDTLAKLGFHGPNI 844
L S W LW+ I +I+ FGW+ IH+ L + L K G +
Sbjct: 870 LQARRGVAASSSSGGDKDIWNKLWQANIPHRIRHFGWRAIHNGLPVCENLFKRKIGGDRM 929
Query: 845 C 847
C
Sbjct: 930 C 930
>ref|XP_020109325.1| uncharacterized protein LOC109724810 [Ananas comosus]
Length = 562
Score = 47.8 bits (112), Expect(2) = 2e-06
Identities = 27/79 (34%), Positives = 40/79 (50%)
Frame = +2
Query: 617 DRWFWNENSHGLPITKCVYRSLLNHTNPSIVSWPGWEILWKLIISAKIKIFGWKLIHHKL 796
D+ FW +S+ L K Y +L + PG +W L I K+K+F W + +L
Sbjct: 444 DQIFWRWSSNRLFSVKSTYLALTDGGTRD----PGLNEIWGLHIPLKVKVFCWLALKKRL 499
Query: 797 QTLDTLAKLGFHGPNICVV 853
T D LAK G+ G +CV+
Sbjct: 500 PTTDLLAKRGWVGNTVCVL 518
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 840 ISVLCKQDEESCEHLFYKCAFTKDIL 917
+ VLC ++ES +HLF +C FTK I+
Sbjct: 515 VCVLCGVEDESVDHLFTRCVFTKFII 540
>ref|XP_019186483.1| PREDICTED: uncharacterized protein LOC109181186 [Ipomoea nil]
Length = 1282
Score = 47.8 bits (112), Expect(3) = 8e-06
Identities = 55/246 (22%), Positives = 96/246 (39%), Gaps = 21/246 (8%)
Frame = +2
Query: 173 NGGLYMKYLVLMRPTXXXXXXXXXXXXCDNIWVRVSRAKYYIIDPWNPL---PQRKSSRA 343
+GGL ++ L M + D++W +V ++KY I +P NPL P++ S A
Sbjct: 762 SGGLGIRRLEEMNISFFAKLGWRLMSGDDSLWAKVFKSKYAISNP-NPLTWRPKQNMSNA 820
Query: 344 *KALIVDLKLIKSYLSKCINDRNDTHXXXXXXXXXXXXFQTYFIDI-------RAIPNQQ 502
K ++ +I + +++ +T +++DI R + Q
Sbjct: 821 WKGILRSAPVIHAGSIHQVHNGRNT---------------LFWLDIWIGDRPLRELATYQ 865
Query: 503 VSSLILN----------NSWDVSIIQ-CWGN*KIVQAISNIAFPSLPDVDRWFWNENSHG 649
+S L + W I++ C + + + I P D+ W E G
Sbjct: 866 ISELASQLTVADYWSEPDGWKWDILENCLQSATLDAIAATIVCPEGNLQDQVVWREEISG 925
Query: 650 LPITKCVYRSLLNHTNPSIVSWPGWEILWKLIISAKIKIFGWKLIHHKLQTLDTLAKLGF 829
Y L + N + W+ +WKL I +IK F W + H+K+ T K GF
Sbjct: 926 SFSVSSAYELLSKNQNTT--KELAWDNIWKLKIPTRIKTFLWLVRHNKVMTNTNRLKRGF 983
Query: 830 HGPNIC 847
+ C
Sbjct: 984 TTNDNC 989
Score = 29.6 bits (65), Expect(3) = 8e-06
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 88 LIRSFIWGKNNAKKGLHLIKWETLLRPKE 174
+IR+F+WG ++ +L+ W T+ + K+
Sbjct: 733 MIRNFLWGAKEGERKCNLVNWNTVTQCKD 761
Score = 20.8 bits (42), Expect(3) = 8e-06
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = +3
Query: 852 CKQDEESCEHLFYKCAFTKDILEYLEMQF 938
C E EH+ C +DI ++ +F
Sbjct: 992 CTNKAEDIEHVLRTCPKARDIWPHILPEF 1020
>ref|XP_024042834.1| uncharacterized protein LOC112099643 [Citrus clementina]
Length = 557
Score = 58.5 bits (140), Expect = 8e-06
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Frame = +2
Query: 488 IPNQQVSSLILNNS--WDVSIIQCWGN*KIVQAISNIAFPSLPDVDRWFWNENSHGLPIT 661
I + V SL++ N WD ++ N + I +I + D D WFW +S GL
Sbjct: 448 IASSSVDSLMIPNQRRWDYEVVNDIFNTRDRNLILHIPLGARHDKDSWFWLPDSKGLYTV 507
Query: 662 KCVYRSLLNHTNPSIVSWPGWEILWKLIISAKIKIFGWKLIHHKLQTLDTLA 817
+ YR L + +P S W LW+L I AK+K F W+ + + L T D L+
Sbjct: 508 RSCYRLLNSMLSPP--SSRAWRKLWQLSIPAKVKNFLWRAMSNVLPTADNLS 557
>gb|KYP45885.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 1192
Score = 47.8 bits (112), Expect(2) = 9e-06
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 8/209 (3%)
Frame = +2
Query: 257 DNIWVRVSRAKYYIIDPWNPLPQRKS--SRA*KALIVDLKLIKSYLSKCINDRNDTHXXX 430
D +WV+V +KY +D P ++K S + + L+K ++ + D
Sbjct: 967 DKLWVQVLSSKYGCLDGILPRIEKKQKISNLWRGICEAWNLVKMHIRWIVGDGASVKFWF 1026
Query: 431 XXXXXXXXXFQTYFIDIRAIPNQQVSSLI-----LNNSWDVSIIQCWGN*KIVQAISNI- 592
+ +P +++S + + WD+ IQ + +IV I +
Sbjct: 1027 DRWVPGLEALIRAALSF--VPAEELSKAVRDYVNIQGEWDLGRIQSYLPDEIVNLIRRLD 1084
Query: 593 AFPSLPDVDRWFWNENSHGLPITKCVYRSLLNHTNPSIVSWPGWEILWKLIISAKIKIFG 772
D DR WN + GL K Y + + P+ S P ++++W +I+
Sbjct: 1085 PLCIADDNDRACWNLTNDGLFTIKSAYEIIGSMQAPT--SHPIFKVIWHWKGPERIRTLL 1142
Query: 773 WKLIHHKLQTLDTLAKLGFHGPNICVV*T 859
WK+ H+ L T + KLG + C + T
Sbjct: 1143 WKIAHNSLLTNEVRMKLGLNNSFSCDICT 1171
Score = 31.2 bits (69), Expect(2) = 9e-06
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 94 RSFIWGKNNAKKGLHLIKWETLLRPKERRPL 186
R F+WG + K +H + W + +PK + L
Sbjct: 912 RQFLWGDTSHNKKVHTVSWSVICQPKNQGAL 942