BLASTX nr result
ID: Cheilocostus21_contig00030642
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00030642
(1789 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polyme... 473 e-151
ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polyme... 366 e-110
ref|XP_020089657.1| probable RNA-dependent RNA polymerase 1 isof... 362 e-108
ref|XP_020089658.1| probable RNA-dependent RNA polymerase 1 isof... 361 e-108
ref|XP_020089659.1| probable RNA-dependent RNA polymerase 1 [Ana... 357 e-107
ref|XP_020675734.1| probable RNA-dependent RNA polymerase 1 isof... 353 e-105
ref|XP_020584591.1| probable RNA-dependent RNA polymerase 1 isof... 349 e-104
ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polyme... 347 e-103
gb|OAY79234.1| RNA-dependent RNA polymerase 1, partial [Ananas c... 353 e-103
ref|XP_020090854.1| probable RNA-dependent RNA polymerase 1 [Ana... 343 e-102
ref|XP_020584589.1| probable RNA-dependent RNA polymerase 1 isof... 338 e-100
gb|PKA52371.1| RNA-dependent RNA polymerase 1 [Apostasia shenzhe... 331 3e-97
dbj|GAY56544.1| hypothetical protein CUMW_172710 [Citrus unshiu] 322 4e-96
ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asp... 326 1e-95
ref|XP_021292684.1| RNA-dependent RNA polymerase 1-like isoform ... 324 6e-95
ref|XP_017970690.1| PREDICTED: RNA-dependent RNA polymerase 1 [T... 322 2e-94
gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobro... 322 4e-94
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare] 322 4e-94
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1 is... 322 6e-94
ref|XP_015382841.1| PREDICTED: RNA-dependent RNA polymerase 1 is... 322 6e-94
>ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Musa acuminata
subsp. malaccensis]
Length = 1134
Score = 473 bits (1217), Expect = e-151
Identities = 240/341 (70%), Positives = 271/341 (79%), Gaps = 1/341 (0%)
Frame = -1
Query: 1021 MTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCKRSRMYAIVQFSRKEDAKD 842
MT T +IS FPS TA +VT FLEKY GEGSVIALKLR K S +YAIVQF R+ED +D
Sbjct: 1 MTSKTIQISRFPSYATAKQVTVFLEKYTGEGSVIALKLRPSKNSTVYAIVQFPRREDVQD 60
Query: 841 LNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSVLWRV 662
L MIQQ K L YDG YLT+ N ERDIIPKPRK LFV+E+ LHFGCPLS+ RLSVL +
Sbjct: 61 LFVMIQQGK-LSYDGHYLTVRNMERDIIPKPRKPLFVLENVTLHFGCPLSQKRLSVLRSM 119
Query: 661 VDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTAAPKI 482
DV+V FGF MRKI FL+S G +KLEL+YESIWEI+LHRS Q SQ+LV+QV AAPKI
Sbjct: 120 EDVKVNFGFEMRKIYFLLSHGIHSYKLELAYESIWEIRLHRSSVQNSQFLVVQVVAAPKI 179
Query: 481 YEAPC-DIASLYEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSLPNIG 305
YE P + SLYE P NYFRD PD+QWVRTTDFT S SIGQSCALCLQLP+ SLPNI
Sbjct: 180 YETPSRNTGSLYEDPRLNYFRDLPDDQWVRTTDFTSSRSIGQSCALCLQLPFECSLPNIR 239
Query: 304 EYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTLIGLM 125
EYFVH+ E+DGHY+LE G+SYS+ LDLVPIVEP TGI V Y+ILFKINHMVQNGTLIG
Sbjct: 240 EYFVHFIEVDGHYDLERGYSYSRNLDLVPIVEPHTGIQVSYKILFKINHMVQNGTLIGPT 299
Query: 124 LDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
LD+ F++LVCPCPS E IERALEMMSVLD++CF PA WL
Sbjct: 300 LDRKFYTLVCPCPSIPTEYIERALEMMSVLDNSCFAPAEWL 340
>ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1 [Elaeis
guineensis]
ref|XP_019704927.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1 [Elaeis
guineensis]
ref|XP_019704928.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1 [Elaeis
guineensis]
Length = 1129
Score = 366 bits (939), Expect = e-110
Identities = 193/345 (55%), Positives = 241/345 (69%), Gaps = 5/345 (1%)
Frame = -1
Query: 1021 MTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCK----RSRMYAIVQFSRKE 854
M T I GFP+ TA V FLE + GEG++ ALK R K +SR YAIVQF+
Sbjct: 1 MGSKTTNIHGFPTTATAPSVKAFLEVHTGEGTIFALKFRLPKYVTAKSRAYAIVQFTTNR 60
Query: 853 DAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSV 674
A+ I + +++YDG L + + ERDI+PKPR SLF++E+A LHFG P+S+++ SV
Sbjct: 61 HAES----IAHKHLVWYDGFVLKVRDVERDIVPKPRTSLFILENATLHFGSPVSQNKFSV 116
Query: 673 LWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTA 494
LW +DV+V FGF +RKI F +S+G +K EL+YESIWEIQLHRS +Q Q+L+IQV A
Sbjct: 117 LWSAMDVKVNFGFNLRKIYFFLSRGGHSYKFELAYESIWEIQLHRSSTQHLQFLLIQVVA 176
Query: 493 APKIYEA-PCDIASLYEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSL 317
APKIYE P + L E P++NYF+D PD+QWVRTTDF+P SIGQS ALCLQL Y+ L
Sbjct: 177 APKIYELFPRNSGLLLEDPIYNYFKDPPDDQWVRTTDFSPLCSIGQSSALCLQLSYDCDL 236
Query: 316 PNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTL 137
PNI +YFV Y E +GH++LE G SYS +LDLVPIVEP I VPY+ILFKINHMVQNGTL
Sbjct: 237 PNIRDYFVFYKESEGHFDLERGISYSCSLDLVPIVEPRPRIEVPYKILFKINHMVQNGTL 296
Query: 136 IGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
G LD+ FF LV P R I+ IE A+E M S+ F PA WL
Sbjct: 297 FGPTLDEKFFRLVSPQYVR-IDYIECAIEEMYFSKSSFFNPANWL 340
>ref|XP_020089657.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Ananas comosus]
Length = 1147
Score = 362 bits (928), Expect = e-108
Identities = 189/358 (52%), Positives = 235/358 (65%), Gaps = 5/358 (1%)
Frame = -1
Query: 1060 LTRVYTTSKSLPKMTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRK----CKR 893
LT + + M G T I GFP + + + LE + G+GSV ALKLR+ ++
Sbjct: 2 LTEFLSGPSATEVMGGKTVNIHGFPLHASVDYAKDILEGFIGDGSVYALKLRQPAVTTQK 61
Query: 892 SRMYAIVQFSRKEDAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALL 713
SR YA+VQF + AK + Y+ +L G YL + +RDI+PKPR SLFVVE A L
Sbjct: 62 SRSYAVVQFLTEGQAKRIIYLADN-SLLMCQGYYLKVRYMKRDIVPKPRASLFVVEHATL 120
Query: 712 HFGCPLSKSRLSVLWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSF 533
HFGCP+ K VLW DV V FGF +RKI F +SQGS +KLELSYESIWEIQLHRS
Sbjct: 121 HFGCPVLKRSFCVLWSASDVRVNFGFNLRKIYFFVSQGSFKYKLELSYESIWEIQLHRSS 180
Query: 532 SQRSQYLVIQVTAAPKIYEAPCDIASL-YEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQS 356
Q SQ+L+ Q+ AAPKIYE + L +E P+ NYF++ PD+QW+R+TDF+PS S+GQS
Sbjct: 181 DQGSQFLLFQMAAAPKIYELALRSSGLVHEDPLLNYFKETPDDQWIRSTDFSPSCSMGQS 240
Query: 355 CALCLQLPYNYSLPNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRI 176
+CLQLPY+Y LPNI EYFV Y E +GHYEL G+SYS ++LVPIVEP I VPY+I
Sbjct: 241 SVICLQLPYDYELPNIHEYFVFYEEFNGHYELNGGYSYSCNMELVPIVEPHPWIHVPYKI 300
Query: 175 LFKINHMVQNGTLIGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
LFKIN MVQNG + G LD FF LVCP ++ I A+E MS TC PA WL
Sbjct: 301 LFKINQMVQNGIISGPTLDDEFFRLVCPY-LVPVDYIVHAIEKMSCFKKTCLDPANWL 357
>ref|XP_020089658.1| probable RNA-dependent RNA polymerase 1 isoform X2 [Ananas comosus]
Length = 1133
Score = 361 bits (926), Expect = e-108
Identities = 187/345 (54%), Positives = 231/345 (66%), Gaps = 5/345 (1%)
Frame = -1
Query: 1021 MTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRK----CKRSRMYAIVQFSRKE 854
M G T I GFP + + + LE + G+GSV ALKLR+ ++SR YA+VQF +
Sbjct: 1 MGGKTVNIHGFPLHASVDYAKDILEGFIGDGSVYALKLRQPAVTTQKSRSYAVVQFLTEG 60
Query: 853 DAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSV 674
AK + Y+ +L G YL + +RDI+PKPR SLFVVE A LHFGCP+ K V
Sbjct: 61 QAKRIIYLADN-SLLMCQGYYLKVRYMKRDIVPKPRASLFVVEHATLHFGCPVLKRSFCV 119
Query: 673 LWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTA 494
LW DV V FGF +RKI F +SQGS +KLELSYESIWEIQLHRS Q SQ+L+ Q+ A
Sbjct: 120 LWSASDVRVNFGFNLRKIYFFVSQGSFKYKLELSYESIWEIQLHRSSDQGSQFLLFQMAA 179
Query: 493 APKIYEAPCDIASL-YEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSL 317
APKIYE + L +E P+ NYF++ PD+QW+R+TDF+PS S+GQS +CLQLPY+Y L
Sbjct: 180 APKIYELALRSSGLVHEDPLLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPYDYEL 239
Query: 316 PNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTL 137
PNI EYFV Y E +GHYEL G+SYS ++LVPIVEP I VPY+ILFKIN MVQNG +
Sbjct: 240 PNIHEYFVFYEEFNGHYELNGGYSYSCNMELVPIVEPHPWIHVPYKILFKINQMVQNGII 299
Query: 136 IGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
G LD FF LVCP ++ I A+E MS TC PA WL
Sbjct: 300 SGPTLDDEFFRLVCPY-LVPVDYIVHAIEKMSCFKKTCLDPANWL 343
>ref|XP_020089659.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
ref|XP_020089661.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
Length = 1133
Score = 357 bits (916), Expect = e-107
Identities = 190/345 (55%), Positives = 229/345 (66%), Gaps = 5/345 (1%)
Frame = -1
Query: 1021 MTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCK----RSRMYAIVQFSRKE 854
M G T I GFP +A+ LE + +GSV ALKLR+ K +SR YA+VQF +
Sbjct: 1 MGGKTVNIHGFPLHASADYAKNILEGFISDGSVYALKLRQPKVTTGKSRSYAVVQFLTEG 60
Query: 853 DAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSV 674
AK + Y+ +L G YL ERDI+PKPR SLFVVE A LHFGCP+SK V
Sbjct: 61 QAKQIIYLADN-SLLRCQGYYLKARYMERDIVPKPRSSLFVVERATLHFGCPVSKRSFCV 119
Query: 673 LWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTA 494
LW DV V FGF +RKI F +S+GS +KLELSYESIWEIQLHRS Q SQ+L+ Q+ A
Sbjct: 120 LWSASDVHVNFGFNLRKIYFFLSKGSFEYKLELSYESIWEIQLHRSSDQGSQFLLFQMAA 179
Query: 493 APKIYEAPCDIASLY-EVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSL 317
APKIYE P +SL E P+ NYF++ PD++W+R+TDF+PS S+GQS +CLQLPY+Y L
Sbjct: 180 APKIYELPLRSSSLVQEDPLLNYFKETPDDKWIRSTDFSPSCSMGQSSVICLQLPYDYEL 239
Query: 316 PNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTL 137
PNI EYFV Y E +GHYEL G SYS ++LVPIVEP I VPY ILFKIN MVQNGT+
Sbjct: 240 PNIREYFVFYEEFNGHYELNRGSSYSCNVELVPIVEPHPLIQVPYNILFKINQMVQNGTI 299
Query: 136 IGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
G LD FF LV P ++ I A+E MS TC PA WL
Sbjct: 300 SGPTLDDEFFRLVSPY-LVPVDYIVHAIEKMSCFKKTCLDPAIWL 343
>ref|XP_020675734.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Dendrobium
catenatum]
Length = 1145
Score = 353 bits (905), Expect = e-105
Identities = 189/346 (54%), Positives = 236/346 (68%), Gaps = 5/346 (1%)
Frame = -1
Query: 1024 KMTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCK----RSRMYAIVQFSRK 857
K G T ++SGFP TTA +VTEFLEK+ GEGSV ALKLR K S+ +AIVQF
Sbjct: 10 KSGGKTIQVSGFPLNTTALQVTEFLEKFTGEGSVFALKLRHPKIIKATSKAFAIVQFVSS 69
Query: 856 EDAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLS 677
A D+ MI R+ L++ G YLT + + DI+PKP S V+ED ++HFGC +++++L
Sbjct: 70 AGAIDIKNMICLRR-LWFQGYYLTSKDVDHDIVPKPSTSSHVMEDVIVHFGCQIAENKLY 128
Query: 676 VLWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVT 497
+LW V DV + FGF +RKI +S +KLEL YESIWEIQL S +QR Q+L IQV
Sbjct: 129 ILWTVKDVRIEFGFNLRKICLFISYKDCLYKLELFYESIWEIQLCHSVTQRCQFLQIQVQ 188
Query: 496 AAPKIYEAPCDIA-SLYEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYS 320
AAPK+Y P + +++E P FNYF+ D+QW+RTTDFTPS SIGQS +CLQLPY Y
Sbjct: 189 AAPKVYVMPPQNSYAMHEGPDFNYFKHSTDDQWIRTTDFTPSCSIGQSSTICLQLPYQYD 248
Query: 319 LPNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGT 140
LPNI + FV++ E H +L G SYS L LVPIV PP G VPY+ILFKINH+VQNGT
Sbjct: 249 LPNIKDNFVYFREDYCHLDLVKGSSYSYDLGLVPIVRPPHGFRVPYKILFKINHLVQNGT 308
Query: 139 LIGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
LIG LD+ FF LV P S + +ERALE MS L S+CF PA WL
Sbjct: 309 LIGPTLDENFFKLVNP-SSVDNDLVERALEKMSYLKSSCFRPAKWL 353
>ref|XP_020584591.1| probable RNA-dependent RNA polymerase 1 isoform X2 [Phalaenopsis
equestris]
Length = 1140
Score = 349 bits (895), Expect = e-104
Identities = 183/346 (52%), Positives = 236/346 (68%), Gaps = 5/346 (1%)
Frame = -1
Query: 1024 KMTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCK----RSRMYAIVQFSRK 857
K+ G T ++SGFP TTA +V E LE Y GEGSV A+KLR K S+ +AIVQF
Sbjct: 10 KIGGKTIQVSGFPLHTTAIQVKECLEYYTGEGSVFAVKLRHPKVIKSTSKAFAIVQFISS 69
Query: 856 EDAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLS 677
A + YM +Q+++ F + SYLT + ERDI+PKP + V+ED ++HFGC +S+ +L
Sbjct: 70 TGATKVKYMTRQQRLCF-EKSYLTSRDVERDIVPKPITASHVMEDVIVHFGCQISEKKLY 128
Query: 676 VLWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVT 497
+LW D + FGF +RKI+ S +KLELSYESIWEIQL+ S +QR ++L IQV
Sbjct: 129 ILWTARDARIEFGFNLRKISLFTSWEDCLYKLELSYESIWEIQLYHSVAQRCRFLQIQVQ 188
Query: 496 AAPKIYEAPCDIA-SLYEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYS 320
AAPK+Y P + ++YE P NY++ DEQW+RTTDFTP SIGQS +CLQLP
Sbjct: 189 AAPKLYMMPSQNSFAIYENPALNYYKHSTDEQWLRTTDFTPQCSIGQSSTICLQLPIKSD 248
Query: 319 LPNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGT 140
LPNI E FV++ E+D + +L +G SYS LVPIV PP G VPY+ILFKINH+VQNG
Sbjct: 249 LPNIKENFVYFKEVDAYLDLVNGRSYSYDFHLVPIVSPPNGFKVPYKILFKINHLVQNGI 308
Query: 139 LIGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
L G LD+TFFSL+ P S+SI+ IERALE M+ L S+CF PA WL
Sbjct: 309 LSGPTLDETFFSLLNPF-SKSIDLIERALEKMTYLKSSCFHPAKWL 353
>ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera]
ref|XP_008812978.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera]
Length = 1131
Score = 347 bits (890), Expect = e-103
Identities = 187/345 (54%), Positives = 235/345 (68%), Gaps = 5/345 (1%)
Frame = -1
Query: 1021 MTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCK----RSRMYAIVQFSRKE 854
M T I GFP+ TA V EFLE + G+G++ ALK R K +SR YAIVQF +
Sbjct: 1 MGSKTINIHGFPTTATAPSVKEFLEVHTGKGTIYALKFRLPKYVTAKSRAYAIVQFIANK 60
Query: 853 DAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSV 674
A+ I +++++ DG L + + ERDI+PKPR SLFV+E+ +HFG P+S+++ SV
Sbjct: 61 HAES----IACKRLVWVDGFVLKVRHMERDIVPKPRTSLFVLENTTVHFGSPVSQNKFSV 116
Query: 673 LWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTA 494
LW DV V FGF MRKI F + QGS +K EL+YESIWEIQLH S ++ Q+L+IQV A
Sbjct: 117 LWSPKDVRVNFGFSMRKIYFFLVQGSHSYKFELAYESIWEIQLHHSSTKYLQFLLIQVVA 176
Query: 493 APKIYEAPC-DIASLYEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSL 317
APK+YE + L+E P +NYF+D PD+QWVRTTDF+P SIGQS ALCLQL Y+ L
Sbjct: 177 APKVYELSLRNSGLLHEDPEYNYFKDLPDDQWVRTTDFSPLCSIGQSSALCLQLSYDCDL 236
Query: 316 PNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTL 137
PNI +YF Y E +G ++LE G SYS++LDLVPIVEP I VPY+ILFKINHMVQNGTL
Sbjct: 237 PNIRDYFPFYKEFEGRFDLERGSSYSRSLDLVPIVEPRPRIEVPYKILFKINHMVQNGTL 296
Query: 136 IGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
G LD FF LV P R I+ IE A+E M S+ F PA WL
Sbjct: 297 FGPTLDGKFFGLVSPQFIR-IDYIECAIEEMYHSKSSFFDPANWL 340
>gb|OAY79234.1| RNA-dependent RNA polymerase 1, partial [Ananas comosus]
Length = 3431
Score = 353 bits (907), Expect = e-103
Identities = 187/341 (54%), Positives = 228/341 (66%), Gaps = 5/341 (1%)
Frame = -1
Query: 1009 TFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCK----RSRMYAIVQFSRKEDAKD 842
T I GFP +A+ LE + G+GS+ ALKLR+ K +S+ YA+VQF + AK
Sbjct: 2285 TVNIHGFPLHASADYAKNILEGFIGDGSIYALKLRQPKVTTGKSKSYAVVQFLTEGQAKQ 2344
Query: 841 LNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSVLWRV 662
+ Y+ +L G YL ERDI+PKPR SLFVVE A LHFGCP+SK VLW
Sbjct: 2345 IIYLADNC-LLRCQGYYLKARYMERDIVPKPRSSLFVVERATLHFGCPVSKRSFCVLWSA 2403
Query: 661 VDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTAAPKI 482
DV V FGF +RKI F +S+GS +KLELSYESIWEIQLHRS Q SQ+L+ Q+ AAPKI
Sbjct: 2404 SDVHVNFGFNLRKIYFFLSKGSFEYKLELSYESIWEIQLHRSSDQGSQFLLFQMAAAPKI 2463
Query: 481 YEAPCDIASLY-EVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSLPNIG 305
YE P +SL E P+ NYF++ PD++W+R+TDF+PS S+GQS +CLQLPY+Y LPNI
Sbjct: 2464 YELPLRSSSLVQEDPLLNYFKETPDDKWIRSTDFSPSCSMGQSSVICLQLPYDYELPNIR 2523
Query: 304 EYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTLIGLM 125
EYFV Y E +GHYEL G SYS ++LVPIVEP I VPY ILFKIN MVQNGT+ G
Sbjct: 2524 EYFVFYEEFNGHYELNRGSSYSCNVELVPIVEPHPLIQVPYNILFKINQMVQNGTISGPT 2583
Query: 124 LDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
LD FF LV P ++ I A+E MS TC PA WL
Sbjct: 2584 LDDEFFRLVSPY-LVPVDYIVHAIEKMSCFKKTCLDPAIWL 2623
Score = 346 bits (887), Expect = e-100
Identities = 183/345 (53%), Positives = 224/345 (64%), Gaps = 5/345 (1%)
Frame = -1
Query: 1021 MTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRK----CKRSRMYAIVQFSRKE 854
M G I GFP TA + LE + G GSV AL+LR+ ++S YA VQF R+
Sbjct: 38 MGGKMVNIYGFPLHATAYYAMKVLEGFIGGGSVYALQLRQPIVTTRKSEAYASVQFVREW 97
Query: 853 DAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSV 674
A+ + M R +L G YL ERDI+PKPR SLFVVE ++HFGCP+SK V
Sbjct: 98 QAELIVNMADNR-LLRCQGYYLMAQYMERDIVPKPRSSLFVVERTIVHFGCPVSKRSFCV 156
Query: 673 LWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTA 494
LW DV V FGF +RK+ S +KLELSYESIWEIQLHRS Q SQ+L+IQ+ A
Sbjct: 157 LWSAYDVHVTFGFNLRKLYLFFSMRGLEYKLELSYESIWEIQLHRSSYQGSQFLLIQMAA 216
Query: 493 APKIYEAP-CDIASLYEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSL 317
APKIYE P C +++ P NYF++ PD+QW+R+TDF+PS S+GQS +CLQLPY+Y L
Sbjct: 217 APKIYELPLCSSGLVHKDPFLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPYDYEL 276
Query: 316 PNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTL 137
PNI EYFV Y E +GHYEL G+SYS ++LVPIVEP I VPY+ILFKIN MVQNG +
Sbjct: 277 PNIHEYFVFYEEFNGHYELNRGYSYSCNMELVPIVEPHPWIHVPYKILFKINQMVQNGII 336
Query: 136 IGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
G LD FF LVCP ++ I A+E MS TC PA WL
Sbjct: 337 SGPTLDDEFFRLVCPY-LVPVDYIVHAIEKMSCFKKTCLDPANWL 380
Score = 335 bits (860), Expect = 4e-97
Identities = 177/328 (53%), Positives = 220/328 (67%), Gaps = 9/328 (2%)
Frame = -1
Query: 958 EFLEKYAGEGSVIALKLRK----CKRSRMYAIVQFSRKEDAKDLNYMIQQRKILFYDGSY 791
+ LE + G+GSV ALKLR+ ++SR YA+VQF + AK + Y+ +L G Y
Sbjct: 1170 DILEGFIGDGSVYALKLRQPAVTTQKSRSYAVVQFLTEGQAKQIIYLADN-SLLRCQGYY 1228
Query: 790 LTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSVLWRVVDVEVYFGFGMRKINFL 611
L +RDI+PKPR SLFVVE A LHFGCP+ K VLW DV V FGF +RKI F
Sbjct: 1229 LKARYMKRDIVPKPRASLFVVEHATLHFGCPVLKRSFCVLWSASDVRVNFGFNLRKIYFF 1288
Query: 610 MSQGSRPFKLELSYESIWEIQLHRSFSQRSQY----LVIQVTAAPKIYEAPCDIASL-YE 446
+S+GS +KLELSYESIWEIQLHRS Q + + + +Q+ AAPKIYE + L +E
Sbjct: 1289 VSKGSFEYKLELSYESIWEIQLHRSSDQETDFQFWFMKLQMAAAPKIYELALRSSGLVHE 1348
Query: 445 VPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSLPNIGEYFVHYSEIDGHY 266
P+ NYF++ PD+QW+R+TDF+PS S+GQS +CLQLPY+Y LPNI EYF+ Y E DGHY
Sbjct: 1349 DPLLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPYDYELPNISEYFLFYEEFDGHY 1408
Query: 265 ELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTLIGLMLDQTFFSLVCPCP 86
EL SG SYS ++LVPIVEP I VPY+ILFKIN MVQNGT+ G LD FF LV P
Sbjct: 1409 ELNSGSSYSCNMELVPIVEPHPLIQVPYKILFKINQMVQNGTISGPTLDDEFFRLVSPY- 1467
Query: 85 SRSIESIERALEMMSVLDSTCFTPATWL 2
S++ I A+E MS TC P WL
Sbjct: 1468 LVSVDYIIHAIEKMSCFKKTCLDPVNWL 1495
>ref|XP_020090854.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
ref|XP_020090855.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
ref|XP_020090856.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
Length = 1133
Score = 343 bits (881), Expect = e-102
Identities = 182/345 (52%), Positives = 223/345 (64%), Gaps = 5/345 (1%)
Frame = -1
Query: 1021 MTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRK----CKRSRMYAIVQFSRKE 854
M G I GFP TA + LE + G SV AL+LR+ ++S YA VQF +
Sbjct: 1 MGGKMVNIYGFPLHATACYAKKVLEGFIGGESVYALQLRQPIVTTRKSEAYASVQFVTEW 60
Query: 853 DAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSV 674
A+ + M R +L G YL ERDI+PKPR SLFVVE ++HFGCP+SK V
Sbjct: 61 QAELIVNMADNR-LLRCQGYYLMAQYMERDIVPKPRSSLFVVERTIVHFGCPVSKRSFCV 119
Query: 673 LWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTA 494
LW DV V FGF +RK+ S G +KLELSYESIWEIQLHRS Q SQ+L+IQ+ A
Sbjct: 120 LWSAYDVHVTFGFNLRKLYLFFSMGGLEYKLELSYESIWEIQLHRSSYQGSQFLLIQMAA 179
Query: 493 APKIYEAP-CDIASLYEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSL 317
APKIYE P C +++ P NYF++ PD+QW+R+TDF+PS S+GQS +CLQLPY+Y L
Sbjct: 180 APKIYELPLCSSGLVHKDPFLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPYDYEL 239
Query: 316 PNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTL 137
PNI EYFV Y E +GHYEL G+SYS ++LVPIVEP I VPY+ILFKIN MVQNG +
Sbjct: 240 PNIHEYFVFYEEFNGHYELNGGYSYSCNMELVPIVEPHPWIHVPYKILFKINQMVQNGII 299
Query: 136 IGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
G LD FF LVCP ++ I A+E MS TC PA WL
Sbjct: 300 SGPTLDDEFFRLVCPY-LVPVDYIVHAIEKMSCFKKTCLDPANWL 343
>ref|XP_020584589.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Phalaenopsis
equestris]
ref|XP_020584590.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Phalaenopsis
equestris]
Length = 1156
Score = 338 bits (868), Expect = e-100
Identities = 183/362 (50%), Positives = 236/362 (65%), Gaps = 21/362 (5%)
Frame = -1
Query: 1024 KMTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCK----RSRMYAIVQFSRK 857
K+ G T ++SGFP TTA +V E LE Y GEGSV A+KLR K S+ +AIVQF
Sbjct: 10 KIGGKTIQVSGFPLHTTAIQVKECLEYYTGEGSVFAVKLRHPKVIKSTSKAFAIVQFISS 69
Query: 856 EDAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLS 677
A + YM +Q+++ F + SYLT + ERDI+PKP + V+ED ++HFGC +S+ +L
Sbjct: 70 TGATKVKYMTRQQRLCF-EKSYLTSRDVERDIVPKPITASHVMEDVIVHFGCQISEKKLY 128
Query: 676 VLWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQ-- 503
+LW D + FGF +RKI+ S +KLELSYESIWEIQL+ S +QR ++L IQ
Sbjct: 129 ILWTARDARIEFGFNLRKISLFTSWEDCLYKLELSYESIWEIQLYHSVAQRCRFLQIQAS 188
Query: 502 --------------VTAAPKIYEAPCDIA-SLYEVPMFNYFRDRPDEQWVRTTDFTPSSS 368
V AAPK+Y P + ++YE P NY++ DEQW+RTTDFTP S
Sbjct: 189 RCDSLFLIWSTIRQVQAAPKLYMMPSQNSFAIYENPALNYYKHSTDEQWLRTTDFTPQCS 248
Query: 367 IGQSCALCLQLPYNYSLPNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITV 188
IGQS +CLQLP LPNI E FV++ E+D + +L +G SYS LVPIV PP G V
Sbjct: 249 IGQSSTICLQLPIKSDLPNIKENFVYFKEVDAYLDLVNGRSYSYDFHLVPIVSPPNGFKV 308
Query: 187 PYRILFKINHMVQNGTLIGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPAT 8
PY+ILFKINH+VQNG L G LD+TFFSL+ P S+SI+ IERALE M+ L S+CF PA
Sbjct: 309 PYKILFKINHLVQNGILSGPTLDETFFSLLNPF-SKSIDLIERALEKMTYLKSSCFHPAK 367
Query: 7 WL 2
WL
Sbjct: 368 WL 369
>gb|PKA52371.1| RNA-dependent RNA polymerase 1 [Apostasia shenzhenica]
Length = 1145
Score = 331 bits (848), Expect = 3e-97
Identities = 180/344 (52%), Positives = 223/344 (64%), Gaps = 3/344 (0%)
Frame = -1
Query: 1024 KMTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCKRS--RMYAIVQFSRKED 851
K G T ++ GF TTAN+V EFLEKY G+GSV+ +K K ++ R YA VQF ++D
Sbjct: 9 KAGGKTLQVYGFSIATTANQVVEFLEKYTGQGSVLVVKFPKFIKTNFRTYAFVQFVTRDD 68
Query: 850 AKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSVL 671
A + M QQR L++ G YLT +A RDIIPKP+ + + LHF C ++ LSVL
Sbjct: 69 ATTIKSMAQQRH-LWFQGFYLTARDAARDIIPKPKTASHELRGVKLHFVCQTAQKNLSVL 127
Query: 670 WRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTAA 491
W DV V FGF +RKI F ++ KLEL+YE IWEIQL RS SQ Q+L+IQV AA
Sbjct: 128 WTAEDVRVEFGFNLRKICFFLTFNESSCKLELAYECIWEIQLFRSVSQDCQFLLIQVQAA 187
Query: 490 PKIYEAPCDIASLY-EVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSLP 314
PKIY+ + +V +F Y +D DEQW+RTTDFTPS SIGQ A CLQLPY + LP
Sbjct: 188 PKIYQVSLQEPEDWRDVSIFYYCKDLQDEQWIRTTDFTPSCSIGQCSAFCLQLPYYHDLP 247
Query: 313 NIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTLI 134
NI E FV+Y E D L+ G++YS L LVPIV PP G+ +PY ILFK+NH+VQNG LI
Sbjct: 248 NIRESFVYYKEEDACLHLKRGYAYSNDLALVPIVGPPHGLRIPYEILFKVNHLVQNGALI 307
Query: 133 GLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
G LD+ FF LV P S I+ I+ ALE MS L S CF P WL
Sbjct: 308 GPTLDERFFQLVDPL-SVPIDFIKCALEKMSYLRSPCFNPVKWL 350
>dbj|GAY56544.1| hypothetical protein CUMW_172710 [Citrus unshiu]
Length = 835
Score = 322 bits (824), Expect = 4e-96
Identities = 166/342 (48%), Positives = 226/342 (66%), Gaps = 4/342 (1%)
Frame = -1
Query: 1015 GTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCKRS--RMYAIVQFSRKEDAKD 842
G T ++ GFP+ TA V +FLE G G+V ALKLR K+ R+YAIVQF+ KE A
Sbjct: 2 GKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADT 61
Query: 841 LNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSVLWRV 662
+ + + + L+Y SYL E+D +P+PR + +E LHFGC +S + +VLWR
Sbjct: 62 IISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRG 121
Query: 661 VDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTAAPKI 482
V+V V FGFGMRKINFL+S ++LEL YE+IWEI+LH Q ++YL+IQ+ AP+I
Sbjct: 122 VNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRI 181
Query: 481 YEAPCDIASL-YEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSLPNIG 305
++ L YE P+FN+F++ PD+QWVRTTDFTPS+ IGQS LC++LPY LP+
Sbjct: 182 FQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFK 241
Query: 304 EYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTLIGLM 125
E F +Y E + + LE+G +YS++LDLVPIV PP GI +PY ILFKIN +VQNG + G +
Sbjct: 242 ENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPL 301
Query: 124 LDQTFFSLVCPCPSR-SIESIERALEMMSVLDSTCFTPATWL 2
LD F+ LV P + SI IE AL+ + L C+ P+ WL
Sbjct: 302 LDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWL 343
>ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
ref|XP_020269098.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
gb|ONK67125.1| uncharacterized protein A4U43_C06F15970 [Asparagus officinalis]
Length = 1128
Score = 326 bits (836), Expect = 1e-95
Identities = 172/347 (49%), Positives = 232/347 (66%), Gaps = 7/347 (2%)
Frame = -1
Query: 1021 MTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCK----RSRMYAIVQFSRKE 854
M T +SGFP TA+ V FLE Y GEGSV A+K+R K RSR YA+VQF +
Sbjct: 1 MGSKTVHVSGFPMNVTADSVKNFLEDYTGEGSVFAVKVRHPKVISTRSRAYALVQFFTSK 60
Query: 853 DAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSV 674
DAK ++ + QQ Y SYL + A+RDI+PKPRK+ F++ED LH GC +S++ L V
Sbjct: 61 DAKIVSSLAQQN--FLYGNSYLKVEYAKRDIVPKPRKAWFILEDTELHIGCLISENTLGV 118
Query: 673 LWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTA 494
LW VEV+FGF M+KI+FL++QGS+ KLELS+ESIW+IQ H S+ SQ+LV+QV A
Sbjct: 119 LWSCTGVEVHFGFNMKKISFLLTQGSQSHKLELSFESIWDIQQHSLPSENSQFLVVQVQA 178
Query: 493 APKIYEAPCDI---ASLYEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNY 323
AP+I+EAP + A ++E P NY+++ D+QW+RTTDFTP SIGQS ALCL+LPY
Sbjct: 179 APRIFEAPVPLQNSALVHEDPSLNYYKELQDDQWIRTTDFTPLCSIGQSFALCLELPYGC 238
Query: 322 SLPNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNG 143
LP+ + F+++ ++ H+ L+ SYS+ DLVPI+EP I +PY+ LFKIN +VQNG
Sbjct: 239 RLPDFHD-FLYFKKVVSHFNLKRTHSYSRNSDLVPIIEPWNAIEIPYKFLFKINTLVQNG 297
Query: 142 TLIGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
TL+G L+ FF + P I IE AL M+ ++ F PA WL
Sbjct: 298 TLMGPTLNDEFFRYISPL-RYPIGFIEYALGKMARWTTSNFNPAKWL 343
>ref|XP_021292684.1| RNA-dependent RNA polymerase 1-like isoform X1 [Herrania umbratica]
ref|XP_021292685.1| RNA-dependent RNA polymerase 1-like isoform X1 [Herrania umbratica]
Length = 1109
Score = 324 bits (830), Expect = 6e-95
Identities = 174/342 (50%), Positives = 222/342 (64%), Gaps = 4/342 (1%)
Frame = -1
Query: 1015 GTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCKRS-RMYAIVQFSRKEDAKDL 839
G T ++SGFPS A V FLE Y G+ +V ALK+R+ K+ R YAIVQF++ DA+ +
Sbjct: 2 GKTIQVSGFPSSVHAEEVKSFLELYTGKETVYALKIRQQKKGGRAYAIVQFTKSTDAELI 61
Query: 838 NYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSVLWRVV 659
+ QR L+Y SYL E DI+PKPR L + D LHFGC +S + VLW V
Sbjct: 62 IRLTNQR--LYYGSSYLKSREMENDIVPKPRTFLHTMGDVTLHFGCQVSNEKFYVLWEEV 119
Query: 658 DVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTAAPKIY 479
DV V FG GMRK FL+S S ++L+L YE+IW+I+LHR ++ S+YL+IQ+ AP+IY
Sbjct: 120 DVVVNFGMGMRKFQFLLSHHSVEYRLDLFYENIWQIELHRPRNRTSKYLLIQLFGAPRIY 179
Query: 478 EAPCDIASL-YEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSLPNIGE 302
E + L +E P NYF D PD+QWVRTTDFT SS IGQS LCL+LPY LPN E
Sbjct: 180 EKDVRSSGLVFEDPSLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLPNFRE 239
Query: 301 YFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTLIGLML 122
F +Y E +G + LESG SYS+ ++LVPIV PP GI +PY ILFKIN +VQNG + G L
Sbjct: 240 NFAYYKESEGKFVLESGSSYSRNVNLVPIVGPPLGIDLPYEILFKINLLVQNGCIPGPAL 299
Query: 121 DQTFFSLVCPCPSRSIES--IERALEMMSVLDSTCFTPATWL 2
D TF+ LV P R I+ I+ ALE + L CF P+ WL
Sbjct: 300 DATFYRLVNP---RRIDKVYIDHALEKLYYLKECCFEPSRWL 338
>ref|XP_017970690.1| PREDICTED: RNA-dependent RNA polymerase 1 [Theobroma cacao]
ref|XP_007045552.2| PREDICTED: RNA-dependent RNA polymerase 1 [Theobroma cacao]
Length = 1109
Score = 322 bits (826), Expect = 2e-94
Identities = 171/340 (50%), Positives = 218/340 (64%), Gaps = 2/340 (0%)
Frame = -1
Query: 1015 GTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCKRS-RMYAIVQFSRKEDAKDL 839
G T ++S FPS A V FLE Y G+ +V ALK+R+ K R YAIVQF++ DA+ +
Sbjct: 2 GKTIQVSRFPSNVHAEEVKTFLESYTGKETVYALKIRQQKNGGRAYAIVQFTKSTDAELI 61
Query: 838 NYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSVLWRVV 659
+ QR L+Y SYL E DI+PKPR L +E LHFGC +S + VLW V
Sbjct: 62 IRLTNQR--LYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEV 119
Query: 658 DVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTAAPKIY 479
DV V FG GMRK+ FL+S ++L+L YE+IW+I+LHR +Q S+YL+IQ+ AP+IY
Sbjct: 120 DVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPRIY 179
Query: 478 EAPCDIASL-YEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSLPNIGE 302
E + L +E P+ NYF D PD+QWVRTTDFT SS IGQS LCL+LPY LPN E
Sbjct: 180 EKDVRSSGLVFENPLLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLPNFRE 239
Query: 301 YFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTLIGLML 122
F +Y E +G + LESG SYS+ L+LVPIV P GI +PY ILFKIN +VQNG + G L
Sbjct: 240 NFAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGPAL 299
Query: 121 DQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
D F+ LV PC + I+ ALE + L CF P+ WL
Sbjct: 300 DANFYRLVNPCRIDKV-YIDHALEKLYYLKECCFEPSKWL 338
>gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gb|EOY01385.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gb|EOY01386.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 322 bits (824), Expect = 4e-94
Identities = 171/340 (50%), Positives = 218/340 (64%), Gaps = 2/340 (0%)
Frame = -1
Query: 1015 GTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCKRS-RMYAIVQFSRKEDAKDL 839
G T ++S FPS A V FLE Y G+ +V ALK+R+ K R YAIVQF++ DA+ +
Sbjct: 2 GKTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGGRAYAIVQFTKSTDAELI 61
Query: 838 NYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSVLWRVV 659
+ QR L+Y SYL E DI+PKPR L +E LHFGC +S + VLW V
Sbjct: 62 IRLTNQR--LYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEV 119
Query: 658 DVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTAAPKIY 479
DV V FG GMRK+ FL+S ++L+L YE+IW+I+LHR +Q S+YL+IQ+ AP+IY
Sbjct: 120 DVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPRIY 179
Query: 478 EAPCDIASL-YEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSLPNIGE 302
E + L +E P+ NYF D PD+QWVRTTDFT SS IGQS LCL+LPY LPN E
Sbjct: 180 EKDVRSSGLVFENPLLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLPNFRE 239
Query: 301 YFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTLIGLML 122
F +Y E +G + LESG SYS+ L+LVPIV P GI +PY ILFKIN +VQNG + G L
Sbjct: 240 NFAYYKESEGKFVLESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGPAL 299
Query: 121 DQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
D F+ LV PC + I+ ALE + L CF P+ WL
Sbjct: 300 DANFYRLVNPCRIDKV-YIDHALEKLYYLKECCFEPSKWL 338
>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
Length = 1115
Score = 322 bits (824), Expect = 4e-94
Identities = 176/345 (51%), Positives = 223/345 (64%), Gaps = 5/345 (1%)
Frame = -1
Query: 1021 MTGTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCKR----SRMYAIVQFSRKE 854
M G T ++SGFPS A+ V + LE+ G G+V A+KLR K SR +AIVQF +
Sbjct: 1 MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEA 60
Query: 853 DAKDLNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSV 674
A L QR L YL AERDI+P+PR ++F ++ A LHFGC L + LSV
Sbjct: 61 HAS-LVLNAAQRNALRSGSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSV 119
Query: 673 LWRVVDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTA 494
LW +V V FGF M++I+F + S+ +KLELSYESIWEIQLHR + ++L+IQV A
Sbjct: 120 LWSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQA 179
Query: 493 APKIYEAPCDIA-SLYEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSL 317
APKIYE ++ S+Y+ P+FNYFRD D+QW RTTDFTPS+SIGQS LCL+LP+ L
Sbjct: 180 APKIYEQNIRLSGSMYDDPLFNYFRDDTDDQWTRTTDFTPSASIGQSYILCLELPHICYL 239
Query: 316 PNIGEYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTL 137
PNI EYFV+Y + + L+ G+SYS VP+V+ VPY ILFKINH+VQNGTL
Sbjct: 240 PNIREYFVYYEVHNDIFNLQPGYSYSSNTCFVPVVKSHYFTDVPYEILFKINHLVQNGTL 299
Query: 136 IGLMLDQTFFSLVCPCPSRSIESIERALEMMSVLDSTCFTPATWL 2
G LD F+ LV P R I+ I+RALE MS L TC P WL
Sbjct: 300 SGPTLDDNFYRLVSPGYER-IDRIKRALEKMSYLKKTCLNPTNWL 343
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Citrus
sinensis]
ref|XP_015382842.1| PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Citrus
sinensis]
ref|XP_024046337.1| RNA-dependent RNA polymerase 1 [Citrus clementina]
ref|XP_024046338.1| RNA-dependent RNA polymerase 1 [Citrus clementina]
Length = 1132
Score = 322 bits (824), Expect = 6e-94
Identities = 166/342 (48%), Positives = 226/342 (66%), Gaps = 4/342 (1%)
Frame = -1
Query: 1015 GTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCKRS--RMYAIVQFSRKEDAKD 842
G T ++ GFP+ TA V +FLE G G+V ALKLR K+ R+YAIVQF+ KE A
Sbjct: 2 GKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADT 61
Query: 841 LNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSVLWRV 662
+ + + + L+Y SYL E+D +P+PR + +E LHFGC +S + +VLWR
Sbjct: 62 IISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRG 121
Query: 661 VDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTAAPKI 482
V+V V FGFGMRKINFL+S ++LEL YE+IWEI+LH Q ++YL+IQ+ AP+I
Sbjct: 122 VNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRI 181
Query: 481 YEAPCDIASL-YEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSLPNIG 305
++ L YE P+FN+F++ PD+QWVRTTDFTPS+ IGQS LC++LPY LP+
Sbjct: 182 FQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFK 241
Query: 304 EYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTLIGLM 125
E F +Y E + + LE+G +YS++LDLVPIV PP GI +PY ILFKIN +VQNG + G +
Sbjct: 242 ENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPL 301
Query: 124 LDQTFFSLVCPCPSR-SIESIERALEMMSVLDSTCFTPATWL 2
LD F+ LV P + SI IE AL+ + L C+ P+ WL
Sbjct: 302 LDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWL 343
>ref|XP_015382841.1| PREDICTED: RNA-dependent RNA polymerase 1 isoform X1 [Citrus
sinensis]
Length = 1138
Score = 322 bits (824), Expect = 6e-94
Identities = 166/342 (48%), Positives = 226/342 (66%), Gaps = 4/342 (1%)
Frame = -1
Query: 1015 GTTFRISGFPSQTTANRVTEFLEKYAGEGSVIALKLRKCKRS--RMYAIVQFSRKEDAKD 842
G T ++ GFP+ TA V +FLE G G+V ALKLR K+ R+YAIVQF+ KE A
Sbjct: 8 GKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADT 67
Query: 841 LNYMIQQRKILFYDGSYLTIHNAERDIIPKPRKSLFVVEDALLHFGCPLSKSRLSVLWRV 662
+ + + + L+Y SYL E+D +P+PR + +E LHFGC +S + +VLWR
Sbjct: 68 IISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRG 127
Query: 661 VDVEVYFGFGMRKINFLMSQGSRPFKLELSYESIWEIQLHRSFSQRSQYLVIQVTAAPKI 482
V+V V FGFGMRKINFL+S ++LEL YE+IWEI+LH Q ++YL+IQ+ AP+I
Sbjct: 128 VNVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRI 187
Query: 481 YEAPCDIASL-YEVPMFNYFRDRPDEQWVRTTDFTPSSSIGQSCALCLQLPYNYSLPNIG 305
++ L YE P+FN+F++ PD+QWVRTTDFTPS+ IGQS LC++LPY LP+
Sbjct: 188 FQKGIRSPDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFK 247
Query: 304 EYFVHYSEIDGHYELESGFSYSKTLDLVPIVEPPTGITVPYRILFKINHMVQNGTLIGLM 125
E F +Y E + + LE+G +YS++LDLVPIV PP GI +PY ILFKIN +VQNG + G +
Sbjct: 248 ENFAYYKESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPL 307
Query: 124 LDQTFFSLVCPCPSR-SIESIERALEMMSVLDSTCFTPATWL 2
LD F+ LV P + SI IE AL+ + L C+ P+ WL
Sbjct: 308 LDSNFYRLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWL 349