BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00030570
         (1726 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018678117.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   906   0.0  
ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   825   0.0  
ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polyme...   808   0.0  
ref|XP_020098906.1| probable RNA-dependent RNA polymerase SHL2 [...   805   0.0  
gb|OAY64204.1| putative RNA-dependent RNA polymerase SHL2 [Anana...   801   0.0  
gb|OAY62820.1| putative RNA-dependent RNA polymerase SHL2 [Anana...   790   0.0  
ref|XP_020108971.1| probable RNA-dependent RNA polymerase SHL2 [...   790   0.0  
gb|PKA57860.1| putative RNA-dependent RNA polymerase SHL2 [Apost...   780   0.0  
gb|PNS92355.1| hypothetical protein POPTR_018G028100v3 [Populus ...   755   0.0  
ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   764   0.0  
ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [P...   761   0.0  
gb|OVA07789.1| RNA recognition motif domain [Macleaya cordata]        758   0.0  
ref|XP_007225440.1| RNA-dependent RNA polymerase 6 [Prunus persi...   756   0.0  
ref|XP_002515520.1| PREDICTED: RNA-dependent RNA polymerase 6 [R...   756   0.0  
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   755   0.0  
ref|XP_021822322.1| RNA-dependent RNA polymerase 6 [Prunus avium]     755   0.0  
ref|XP_018847783.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   742   0.0  
ref|XP_023881956.1| RNA-dependent RNA polymerase 6 [Quercus sube...   749   0.0  
gb|ASZ85186.1| RNA-dependent RNA polymerase 6, partial [Hylocere...   732   0.0  
gb|PNT33710.1| hypothetical protein POPTR_006G253500v3 [Populus ...   739   0.0  

>ref|XP_018678117.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            SHL2 [Musa acuminata subsp. malaccensis]
          Length = 1199

 Score =  906 bits (2341), Expect = 0.0
 Identities = 444/574 (77%), Positives = 503/574 (87%)
 Frame = +1

Query: 1    MGTENSFRANRRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCKI 180
            +GTE+SFR NRRRT DPF+F+N  VEIGN +SRDEF+VSWK P SA DFVIDPFDDCCKI
Sbjct: 116  VGTESSFRVNRRRTTDPFRFSNACVEIGNLVSRDEFLVSWKGPDSAVDFVIDPFDDCCKI 175

Query: 181  LFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVHY 360
            LF+K+T F FK   EM  I C+FKVEFL RDI+E+RV  D APFV+QFQL+  S P V+Y
Sbjct: 176  LFSKETAFYFKGLREMTLIMCDFKVEFLLRDINEVRVHKDAAPFVMQFQLI--SAPYVYY 233

Query: 361  RTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYLK 540
            RTADDDIY SVPF+LLDDEDPWIRTTD TP  AIGR N+YRI LSPRFG K++R+L+YL+
Sbjct: 234  RTADDDIYTSVPFNLLDDEDPWIRTTDITPSGAIGRCNSYRISLSPRFGPKMERSLAYLR 293

Query: 541  ERRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQL 720
            E  V+E R R +LVVRDEP +GAH SDPFF +QN +GINF+  FLVNALVHRGI+NQHQL
Sbjct: 294  EHGVAENRPRCRLVVRDEPGYGAHMSDPFFCIQNKKGINFATMFLVNALVHRGIVNQHQL 353

Query: 721  SEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSDD 900
            SEEFFS+LRCQS+ +VN T+LMHILSY+HPIFDAP RLKLVQ WLL+NPKLLRH+K SDD
Sbjct: 354  SEEFFSLLRCQSE-MVNGTALMHILSYKHPIFDAPGRLKLVQEWLLRNPKLLRHSKFSDD 412

Query: 901  TIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYYV 1080
             I VR+LVITPT+AYCLP E+ELSNRVLR+YKE +DRFLRVTF DEGMQ+LN+NVLNYYV
Sbjct: 413  IIEVRKLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFTDEGMQQLNSNVLNYYV 472

Query: 1081 APIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVPK 1260
            APIV++ITSNSFPQKT VFKR+ +ILTNGFHL GQKY+FLAFS+NQLRD+SAWFFAEV  
Sbjct: 473  APIVRDITSNSFPQKTTVFKRVKDILTNGFHLYGQKYSFLAFSSNQLRDRSAWFFAEVSG 532

Query: 1261 ILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFSD 1440
             +TV+ IR+WMGKFSNK+VAKCAARMGQCFSSTYATVNV P E N + EDI RNGY+FSD
Sbjct: 533  SITVATIRNWMGKFSNKNVAKCAARMGQCFSSTYATVNVTPNEVNSELEDIKRNGYVFSD 592

Query: 1441 GIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKFE 1620
            GIGKITP+LALEVA KL LTE+PPSAYQIRYAGCKGVVAVWPG+ DGI+L LRPSMNKFE
Sbjct: 593  GIGKITPELALEVAQKLHLTEDPPSAYQIRYAGCKGVVAVWPGNDDGIKLSLRPSMNKFE 652

Query: 1621 SNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            SNHT LEVVSWTRFQPGFLNRQIVTLL SLKVPD
Sbjct: 653  SNHTILEVVSWTRFQPGFLNRQIVTLLSSLKVPD 686


>ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            SHL2 [Phoenix dactylifera]
          Length = 1198

 Score =  825 bits (2131), Expect = 0.0
 Identities = 410/573 (71%), Positives = 481/573 (83%)
 Frame = +1

Query: 4    GTENSFRANRRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCKIL 183
            GT++SFR +RRRT+DPF+F +V VEIG   SRDEF+V+WK P S  DF+IDPFD  C+IL
Sbjct: 117  GTDSSFRISRRRTMDPFRFTDVGVEIGTLASRDEFLVAWKGPKSGVDFLIDPFDGRCRIL 176

Query: 184  FTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVHYR 363
            F+K+T F+FK+  EMA +KC+FKVEFLARDI+E+++F D  P  + FQL   S P V+YR
Sbjct: 177  FSKETAFAFKDIKEMAVLKCDFKVEFLARDINEVKLFTDQYPPAMLFQLA--STPWVYYR 234

Query: 364  TADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYLKE 543
            TADDDI  + PFSLLDDEDPWIRTTDFTP  AI R  +YRI  SPR+G  LK +L+YLKE
Sbjct: 235  TADDDILVTAPFSLLDDEDPWIRTTDFTPGGAISRCCSYRISFSPRYGRILKESLAYLKE 294

Query: 544  RRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQLS 723
            RR++E R +  LVV +EP+FG    DPFFS+Q+ EGI+FS  FLV+ALVH+GI+NQHQLS
Sbjct: 295  RRIAEHRPKRPLVVLEEPDFGTLMPDPFFSVQHKEGISFSIMFLVDALVHKGIVNQHQLS 354

Query: 724  EEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSDDT 903
            EEFF++LR QSD + NET+L HI +Y+ PIFDA RRLKLVQ WLLKNPK L+ +K SDD+
Sbjct: 355  EEFFALLRSQSDSM-NETALRHIWAYKTPIFDACRRLKLVQDWLLKNPKFLKSSKLSDDS 413

Query: 904  IAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYYVA 1083
              VRRLVITPT+AYCLP  +ELSNRVLR YKE +DRFLRVTFMDEGMQ+LNNNVLNYYVA
Sbjct: 414  SEVRRLVITPTKAYCLPPGVELSNRVLRNYKEVADRFLRVTFMDEGMQKLNNNVLNYYVA 473

Query: 1084 PIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVPKI 1263
            PIVKE+TSNSFPQKT VF+R+ +IL +GFHLCG++Y+FLAFS+NQLRD+SAWFFAE    
Sbjct: 474  PIVKELTSNSFPQKTTVFRRVRSILIDGFHLCGRRYSFLAFSSNQLRDRSAWFFAE-DSN 532

Query: 1264 LTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFSDG 1443
             +V +IR WMGKF+NK+VAKCAARMGQCFSSTYATV+VPP + NP   DI R GYIFSDG
Sbjct: 533  TSVEDIRDWMGKFANKNVAKCAARMGQCFSSTYATVDVPPDQVNPLLPDIERKGYIFSDG 592

Query: 1444 IGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKFES 1623
            IGKITP+LA+EVA+KLQLTENPPSAYQIRYAG KGVVAVWPGD DGIRL LRPSMNKFES
Sbjct: 593  IGKITPELAMEVAEKLQLTENPPSAYQIRYAGTKGVVAVWPGDDDGIRLSLRPSMNKFES 652

Query: 1624 NHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            +HT LEVVSWTRFQPGFLNRQIVTLL SL VPD
Sbjct: 653  SHTMLEVVSWTRFQPGFLNRQIVTLLSSLNVPD 685


>ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
            guineensis]
 ref|XP_019706451.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
            guineensis]
 ref|XP_019706452.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
            guineensis]
          Length = 1198

 Score =  808 bits (2087), Expect = 0.0
 Identities = 401/573 (69%), Positives = 474/573 (82%)
 Frame = +1

Query: 4    GTENSFRANRRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCKIL 183
            G ++SFR NRRRT DPF+F +V VEIG   SRDEF+V+WK P    DF+IDPFD CC+IL
Sbjct: 117  GIDSSFRINRRRTTDPFRFVDVGVEIGTLASRDEFLVAWKGPKLGVDFLIDPFDGCCRIL 176

Query: 184  FTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVHYR 363
            F+K+T F+FK+  EMA IKC+FKVEFL RDI+E+++F D  P V+ FQL   S P V+YR
Sbjct: 177  FSKETAFAFKDIKEMAVIKCDFKVEFLVRDINEVKLFTDRYPHVMLFQL--SSTPWVYYR 234

Query: 364  TADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYLKE 543
            TADDDI+ +  FSLLDDEDPWIRTTDFTP  AI RS++YR+  SPR+G  L+++L+YL+E
Sbjct: 235  TADDDIHVTASFSLLDDEDPWIRTTDFTPGGAISRSSSYRVSFSPRYGRILEKSLAYLRE 294

Query: 544  RRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQLS 723
            RR++E   +  L VR+EP FG    DPFFS+Q  EGI+FS  FLV+ALVH+GI+NQHQLS
Sbjct: 295  RRIAEHWPKRPLAVREEPEFGTLMPDPFFSVQYKEGISFSIMFLVDALVHKGIVNQHQLS 354

Query: 724  EEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSDDT 903
            EEFF++LR QSD  VNE +L HI +Y+ PIFD  +RLKLVQ WLLKNPKLL+ +K  DD+
Sbjct: 355  EEFFALLRSQSD-AVNEIALRHIWAYKTPIFDPRKRLKLVQDWLLKNPKLLKSSKLLDDS 413

Query: 904  IAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYYVA 1083
              VRRLVITPT+AYCLP E+ELSNRVLR YK+ +DRFLRVTFMDEGMQ LNNNVLNYYVA
Sbjct: 414  TEVRRLVITPTKAYCLPPEVELSNRVLRNYKKVADRFLRVTFMDEGMQPLNNNVLNYYVA 473

Query: 1084 PIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVPKI 1263
            PIVKE+TSNSFPQKT VF+R+ NIL +GFHLCG++Y+FLAFS+NQLRD+SAWFFAE    
Sbjct: 474  PIVKELTSNSFPQKTTVFRRVRNILLDGFHLCGRRYSFLAFSSNQLRDRSAWFFAE-DSN 532

Query: 1264 LTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFSDG 1443
             +V  IR+WMGKF+NK+VAKCAARMGQCFSSTYATV+VP  + NP   DI RNGY+FSDG
Sbjct: 533  TSVMAIRNWMGKFANKNVAKCAARMGQCFSSTYATVDVPLDQFNPLLPDIERNGYVFSDG 592

Query: 1444 IGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKFES 1623
            IGKI P+LA+EVA+KLQLTENPPSAYQIRYAG KGVVAVWP D DG+RL LRPSMNKFES
Sbjct: 593  IGKIIPELAIEVAEKLQLTENPPSAYQIRYAGFKGVVAVWPADDDGVRLSLRPSMNKFES 652

Query: 1624 NHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            +HT LEVVSWTRFQPGFLNRQIVTLL SL V D
Sbjct: 653  SHTMLEVVSWTRFQPGFLNRQIVTLLSSLNVAD 685


>ref|XP_020098906.1| probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
 ref|XP_020098907.1| probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
          Length = 1234

 Score =  805 bits (2079), Expect = 0.0
 Identities = 396/574 (68%), Positives = 477/574 (83%), Gaps = 3/574 (0%)
 Frame = +1

Query: 10   ENSFRANRRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSS--AADFVIDPFDDCCKIL 183
            E+SFRA+RRRT DPFKF++V ++IG+ ++RD+F  SW  PS   AADFV+DPFD  CKIL
Sbjct: 148  ESSFRASRRRTTDPFKFSDVRLDIGSLVARDDFCASWTCPSGSGAADFVVDPFDGLCKIL 207

Query: 184  FTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVHYR 363
            F ++T F+FK   + A+I+C+FK+EFLARDI+++R++ D AP  +  QL   S P V YR
Sbjct: 208  FARETAFAFKGTRDAATIRCDFKIEFLARDIADVRLYTDRAPLAMLLQLT--SAPFVSYR 265

Query: 364  TADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYLKE 543
            TADDDIY SVPF+LLDDEDPWIRTTDFTP  A+GR ++Y+I LSPRFGAKL+RAL YL++
Sbjct: 266  TADDDIYTSVPFNLLDDEDPWIRTTDFTPTGAVGRCSSYKISLSPRFGAKLERALDYLRK 325

Query: 544  RRVSEIRLRHQLVVRDEPNFG-AHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQL 720
            RR+ + R    L VR EP+FG +  +D FFS+ + EG+ F   FLVNALVH+GI+NQHQL
Sbjct: 326  RRIPDYRPNRPLAVRPEPDFGFSPATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQL 385

Query: 721  SEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSDD 900
            S++FF +LR QS  +VNET+L HI SY+ PIFDA RRLKLVQ WLL NPKLLR +K +DD
Sbjct: 386  SDQFFGLLRGQSG-VVNETALRHIWSYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADD 444

Query: 901  TIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYYV 1080
               VRRLVITPT+AYC+P  +ELSNRVLR+YKE +DRFLRVTF DEGMQ+LNN+VLNYYV
Sbjct: 445  NAEVRRLVITPTKAYCIPPAIELSNRVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYV 504

Query: 1081 APIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVPK 1260
            APIV++ITSNS+ QKT VFKR+ +IL +GF+LCG++Y+FLAFS+NQLRD+SAWFFAE  K
Sbjct: 505  APIVRDITSNSYQQKTTVFKRVKSILMDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDSK 564

Query: 1261 ILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFSD 1440
              TV+ I  WMG+FSN++VAKCAARMGQCFSSTYATV VP +E NP   DI  NGYIFSD
Sbjct: 565  T-TVAAITKWMGRFSNRNVAKCAARMGQCFSSTYATVEVPLREVNPVLPDIEGNGYIFSD 623

Query: 1441 GIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKFE 1620
            GIGKITPDLA+EVA+KL+LT+NPPSAYQIRYAGCKGVVAVWPGD DGIRL LRPSMNKFE
Sbjct: 624  GIGKITPDLAMEVAEKLKLTDNPPSAYQIRYAGCKGVVAVWPGDVDGIRLSLRPSMNKFE 683

Query: 1621 SNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            SNHT LEVVSW+RFQPGFLNRQI+TLL SL VPD
Sbjct: 684  SNHTVLEVVSWSRFQPGFLNRQIITLLSSLSVPD 717


>gb|OAY64204.1| putative RNA-dependent RNA polymerase SHL2 [Ananas comosus]
          Length = 1234

 Score =  801 bits (2069), Expect = 0.0
 Identities = 395/574 (68%), Positives = 476/574 (82%), Gaps = 3/574 (0%)
 Frame = +1

Query: 10   ENSFRANRRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSS--AADFVIDPFDDCCKIL 183
            E+SFRA+RRRT DPFKF++V ++IG+ ++RD+F  SW  PS   AADFV+DPFD  CKIL
Sbjct: 148  ESSFRASRRRTTDPFKFSDVRLDIGSLVARDDFCASWTCPSGSGAADFVVDPFDGLCKIL 207

Query: 184  FTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVHYR 363
            F ++T F+FK   + A+I+C+FK+EFLARDI+++R++ D AP  +  QL   S P V YR
Sbjct: 208  FARETAFAFKGTRDAATIRCDFKIEFLARDIADVRLYTDRAPLAMLLQLT--SAPFVSYR 265

Query: 364  TADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYLKE 543
            TADDDIY SVPF+LLDDEDPWIRTTDFTP  A+GR ++Y+I LSPRFGAKL+RAL YL++
Sbjct: 266  TADDDIYTSVPFNLLDDEDPWIRTTDFTPTGAVGRCSSYKISLSPRFGAKLERALDYLRK 325

Query: 544  RRVSEIRLRHQLVVRDEPNFG-AHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQL 720
            RR+ + R    L VR EP+FG +  +D FFS+ + EG+ F   FLVNALVH+GI+NQHQL
Sbjct: 326  RRIPDYRPNRPLAVRPEPDFGFSPATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQL 385

Query: 721  SEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSDD 900
            S++FF +LR QS  +VNET+L HI SY+ PIFDA RRLKLVQ WLL NPKLLR +K +DD
Sbjct: 386  SDQFFGLLRGQSG-VVNETALRHIWSYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADD 444

Query: 901  TIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYYV 1080
               VRRLVITPT+AYC+P  +ELSNRVLR+YKE +DRFLRVTF DEGMQ+LNN+VLNYYV
Sbjct: 445  NAEVRRLVITPTKAYCIPPAIELSNRVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYV 504

Query: 1081 APIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVPK 1260
            APIV++ITSNS+ QKT VFKR+ +IL +GF+LCG++Y+FLAFS+NQLRD+SAWFFAE  K
Sbjct: 505  APIVRDITSNSYQQKTTVFKRVKSILMDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDSK 564

Query: 1261 ILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFSD 1440
              TV+ I  WMG+FSN++VAKCAARMGQCFSSTYATV VP +E NP   DI  NGYIFSD
Sbjct: 565  T-TVAAITKWMGRFSNRNVAKCAARMGQCFSSTYATVEVPLREVNPVLPDIEGNGYIFSD 623

Query: 1441 GIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKFE 1620
            GIGKITPDLA+EVA+KL+LT+NPPSAYQIRYAGCKGVVAVWPGD DGIRL LR SMNKFE
Sbjct: 624  GIGKITPDLAMEVAEKLKLTDNPPSAYQIRYAGCKGVVAVWPGDVDGIRLSLRLSMNKFE 683

Query: 1621 SNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            SNHT LEVVSW+RFQPGFLNRQI+TLL SL VPD
Sbjct: 684  SNHTVLEVVSWSRFQPGFLNRQIITLLSSLSVPD 717


>gb|OAY62820.1| putative RNA-dependent RNA polymerase SHL2 [Ananas comosus]
          Length = 1232

 Score =  790 bits (2041), Expect = 0.0
 Identities = 391/574 (68%), Positives = 473/574 (82%), Gaps = 3/574 (0%)
 Frame = +1

Query: 10   ENSFRANRRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSS--AADFVIDPFDDCCKIL 183
            E+SFR +RRRT DPFKF++V ++IG+ ++RD+F  SW  PS   AADFV+DPFD  CKIL
Sbjct: 146  ESSFRVSRRRTTDPFKFSDVRLDIGSLLARDDFCASWTCPSGSGAADFVVDPFDGLCKIL 205

Query: 184  FTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVHYR 363
            F ++T F+FK   + A+I+C+FK+EFLARDI+E+R++ D A   +  QL   S P + YR
Sbjct: 206  FARETAFAFKGTRDAATIRCDFKIEFLARDIAEVRLYTDRASLAMLLQLT--SAPYISYR 263

Query: 364  TADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYLKE 543
            TADDDIY SVPF+LLDDEDPWIRTTDF+P  A+GR ++Y+I LSPRFG KL+RAL YL++
Sbjct: 264  TADDDIYTSVPFNLLDDEDPWIRTTDFSPTGAVGRGSSYKISLSPRFGGKLERALDYLRK 323

Query: 544  RRVSEIRLRHQLVVRDEPNFG-AHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQL 720
            RR+ + R   QLVVR EP+FG +  +D FFS+ + EG+ F   FLVNALVH+GI+NQHQL
Sbjct: 324  RRIPDYRPNRQLVVRPEPDFGFSPATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQL 383

Query: 721  SEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSDD 900
            S++FF +LR Q+  +VNET+L HI SY+ PIFDA RRLKLVQ WLL NPKLLR +K +D 
Sbjct: 384  SDQFFGLLRGQNG-VVNETALRHIWSYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADY 442

Query: 901  TIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYYV 1080
               VRRLVITPT+AYC+P  +ELSNRVLR+YKE +DRFLRVTF DEGMQ+LNN+VLNYYV
Sbjct: 443  YAEVRRLVITPTKAYCIPPAIELSNRVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYV 502

Query: 1081 APIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVPK 1260
            APIVKEITSNS+ QKT VFKR+ +IL +GF+LCG+KY+FLAFS+NQLRD+SAWFFAE  K
Sbjct: 503  APIVKEITSNSYQQKTTVFKRVKSILEDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDSK 562

Query: 1261 ILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFSD 1440
              TV+ I  WMG+FS+++VAKCAAR+GQCFSSTYATV VP +E NP   DI  N YIFSD
Sbjct: 563  -TTVAAITKWMGRFSDRNVAKCAARIGQCFSSTYATVEVPLREVNPVLPDIEGNRYIFSD 621

Query: 1441 GIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKFE 1620
            GIGKITPDLA+EVA+KL+LT+NPPSAYQIRYAGCKGVVAVWPGD  GIRL LRPSMNKFE
Sbjct: 622  GIGKITPDLAMEVAEKLKLTDNPPSAYQIRYAGCKGVVAVWPGDEIGIRLSLRPSMNKFE 681

Query: 1621 SNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            SNHT LEVVSW+RFQPGFLNRQI+TLL SL VPD
Sbjct: 682  SNHTVLEVVSWSRFQPGFLNRQIITLLSSLSVPD 715


>ref|XP_020108971.1| probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
          Length = 1232

 Score =  790 bits (2040), Expect = 0.0
 Identities = 391/574 (68%), Positives = 473/574 (82%), Gaps = 3/574 (0%)
 Frame = +1

Query: 10   ENSFRANRRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSS--AADFVIDPFDDCCKIL 183
            E+SFR +RRRT DPFKF++V ++IG+ ++RD+F  SW  PS   AADFV+DPFD  CKIL
Sbjct: 146  ESSFRVSRRRTTDPFKFSDVRLDIGSLLARDDFCASWTCPSGSGAADFVVDPFDGLCKIL 205

Query: 184  FTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVHYR 363
            F ++T F+FK   + A+I+C+FK+EFLARDI+E+R++ D A   +  QL   S P + YR
Sbjct: 206  FARETAFAFKGTRDAATIRCDFKIEFLARDIAEVRLYTDRASLAMLLQLT--SAPYISYR 263

Query: 364  TADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYLKE 543
            TADDDIY SVPF+LLDDEDPWIRTTDF+P  A+GR ++Y+I LSPRFG KL+RAL YL++
Sbjct: 264  TADDDIYTSVPFNLLDDEDPWIRTTDFSPTGAVGRCSSYKISLSPRFGGKLERALDYLRK 323

Query: 544  RRVSEIRLRHQLVVRDEPNFG-AHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQL 720
            RR+ + R   QLVVR EP+FG +  +D FFS+ + EG+ F   FLVNALVH+GI+NQHQL
Sbjct: 324  RRIPDYRPNRQLVVRPEPDFGFSPATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQL 383

Query: 721  SEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSDD 900
            S++FF +LR Q+  +VNET+L HI SY+ PIFDA RRLKLVQ WLL NPKLLR +K +D 
Sbjct: 384  SDQFFGLLRGQNG-VVNETALRHIWSYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADY 442

Query: 901  TIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYYV 1080
               VRRLVITPT+AYC+P  +ELSNRVLR+YKE +DRFLRVTF DEGMQ+LNN+VLNYYV
Sbjct: 443  YAEVRRLVITPTKAYCIPPAIELSNRVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYV 502

Query: 1081 APIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVPK 1260
            APIVKEITSNS+ QKT VFKR+ +IL +GF+LCG+KY+FLAFS+NQLRD+SAWFFAE  K
Sbjct: 503  APIVKEITSNSYQQKTTVFKRVKSILEDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDSK 562

Query: 1261 ILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFSD 1440
              TV+ I  WMG+FS+++VAKCAAR+GQCFSSTYATV VP +E NP   DI  N YIFSD
Sbjct: 563  -TTVAAITKWMGRFSDRNVAKCAARIGQCFSSTYATVEVPLREVNPVLPDIEGNRYIFSD 621

Query: 1441 GIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKFE 1620
            GIGKITPDLA+EVA+KL+LT+NPPSAYQIRYAGCKGVVAVWPGD  GIRL LRPSMNKFE
Sbjct: 622  GIGKITPDLAMEVAEKLKLTDNPPSAYQIRYAGCKGVVAVWPGDEIGIRLSLRPSMNKFE 681

Query: 1621 SNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            SNHT LEVVSW+RFQPGFLNRQI+TLL SL VPD
Sbjct: 682  SNHTVLEVVSWSRFQPGFLNRQIITLLSSLSVPD 715


>gb|PKA57860.1| putative RNA-dependent RNA polymerase SHL2 [Apostasia shenzhenica]
          Length = 1176

 Score =  780 bits (2014), Expect = 0.0
 Identities = 378/573 (65%), Positives = 471/573 (82%)
 Frame = +1

Query: 4    GTENSFRANRRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCKIL 183
            G E+S+ A RRR +DPFKF+ V VE+G+ +SRDEF+++WK PS  ADF++DPFD CC+I 
Sbjct: 119  GAESSYIAQRRRNIDPFKFSAVGVELGHLVSRDEFLMAWKRPS--ADFIVDPFDGCCQIR 176

Query: 184  FTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVHYR 363
            FTK+T FS K   ++ +I C+FK++FL RD+ +++V+ D+APFV+   L   S P V+YR
Sbjct: 177  FTKETAFSLKGIKKIIAINCDFKLQFLVRDMDDIKVWKDEAPFVLLLHL--SSTPLVYYR 234

Query: 364  TADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYLKE 543
            TADDDIYESVPFSLLDDEDPWIRTTDFT   AIGRSNA RI LSPRFG KL++AL+Y+K 
Sbjct: 235  TADDDIYESVPFSLLDDEDPWIRTTDFTMGGAIGRSNACRITLSPRFGPKLEKALTYMKS 294

Query: 544  RRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQLS 723
             R+ E R R  L++R+EP F    ++PFFS++   GI+F   F+VNA+VH+GIINQH L+
Sbjct: 295  HRIPESRPRRPLLLRNEPGFAVPMAEPFFSIKPTTGISFGTLFMVNAVVHKGIINQHHLT 354

Query: 724  EEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSDDT 903
             EFF +LR QSD + N+ +L HI +Y+ PIFDA RRLK+VQ WLL+NPKL   +K +DD 
Sbjct: 355  GEFFDLLRTQSDKL-NDAALRHIWAYKRPIFDACRRLKVVQDWLLRNPKLANGSKVADDN 413

Query: 904  IAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYYVA 1083
              VRR+VITPT+A+CLP E+ELSNRVLR Y+E +DRFLRVTF DE MQ+LN++VLNYYVA
Sbjct: 414  AEVRRVVITPTKAHCLPPEVELSNRVLRHYREVADRFLRVTFTDESMQQLNSSVLNYYVA 473

Query: 1084 PIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVPKI 1263
            PIV++I SN+FPQKT VF RI +IL++GFHLCG++Y+FLAFS+NQLRDQSAWFFA+  K+
Sbjct: 474  PIVRDIISNAFPQKTTVFPRIKSILSDGFHLCGRRYSFLAFSSNQLRDQSAWFFADSEKV 533

Query: 1264 LTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFSDG 1443
             TV++IR WMG+F+NK+VAKCAARMGQCFSSTYATV + P+E N + ED+ RNGY+FSDG
Sbjct: 534  -TVASIRRWMGRFTNKNVAKCAARMGQCFSSTYATVRLMPEEVNEELEDVERNGYVFSDG 592

Query: 1444 IGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKFES 1623
            IGKI+P L +EVA++LQLTE+PPSAYQIRYAGCKGVVAVWP   D IRL LRPSMNKFES
Sbjct: 593  IGKISPGLGMEVAERLQLTESPPSAYQIRYAGCKGVVAVWPEKDDKIRLSLRPSMNKFES 652

Query: 1624 NHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            NH  LE+VSWTRFQPGFLNRQIVTLL SL+VPD
Sbjct: 653  NHNVLEIVSWTRFQPGFLNRQIVTLLSSLEVPD 685


>gb|PNS92355.1| hypothetical protein POPTR_018G028100v3 [Populus trichocarpa]
          Length = 869

 Score =  755 bits (1950), Expect = 0.0
 Identities = 370/578 (64%), Positives = 456/578 (78%), Gaps = 4/578 (0%)
 Frame = +1

Query: 1    MGTENSFRAN-RRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            +G +N F  N RRRT  PFK ++V  EIGN +SRDEF V W+ P S  DF++DPFD  CK
Sbjct: 112  LGPKNPFTLNQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCK 171

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
              F+++T FS K+  E A IKC+FKVEFL RDI+E+  + + +  V+  QL   S P V 
Sbjct: 172  FCFSRNTAFSLKSTSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLA--SAPWVW 229

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI   VPF LLDD+DPWIRTTDFT   AIGR ++YR+ + PR G+KL++A+ YL
Sbjct: 230  YRTADDDIEAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYL 289

Query: 538  KERRVS---EIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIIN 708
            KERRV    E   R ++ + DEP+FG   SDPFF + + EGI F   FLVNA++H+GI N
Sbjct: 290  KERRVQVLQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFN 349

Query: 709  QHQLSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAK 888
            QHQLS +FF +LR Q  + VN ++L HI +YR P+F+A RRLK VQ WLLKNP L ++ K
Sbjct: 350  QHQLSNDFFDLLRNQHTE-VNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPK 408

Query: 889  QSDDTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVL 1068
            Q  D + +RRLVITPT+AYCLP E+ELSNRVLR+YK+ +DRFLRVTFMDEG+QR+N+NVL
Sbjct: 409  QLGDVVEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVL 468

Query: 1069 NYYVAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFA 1248
            NYYVAPIV++ITSNSFPQKT +FKR+ +ILT GF+LCG++Y+FLAFSANQLRDQSAWFF+
Sbjct: 469  NYYVAPIVRDITSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFS 528

Query: 1249 EVPKILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGY 1428
            E   I +V +++SWMGKF+N+++AKCAARMGQCFSSTYAT+ VPP+E N D  DI RNGY
Sbjct: 529  EERNI-SVLDVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGY 587

Query: 1429 IFSDGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSM 1608
            +FSDGIG ITPDLA EVA+KL+L  +PP AYQIRYAGCKGVVA WPG GDG+RL LRPSM
Sbjct: 588  VFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSM 647

Query: 1609 NKFESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            NKF+SNHTTLE+ SWTRFQPGFLNRQI+TLL +L VPD
Sbjct: 648  NKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNVPD 685


>ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  764 bits (1974), Expect = 0.0
 Identities = 391/577 (67%), Positives = 456/577 (79%), Gaps = 3/577 (0%)
 Frame = +1

Query: 1    MGTENSFRAN-RRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            +G E  F  N RRRT  PFKF +V +EIG  +SRDE+   W+ PSS  DF++DPFD  CK
Sbjct: 112  LGPETPFHLNQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCK 171

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
             LFTKDT FSFK  P+ A IKCNFKVEFL R+I+E+R   D +  ++  QL   S P V+
Sbjct: 172  FLFTKDTAFSFKGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQL--SSSPFVY 229

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI E+VPF LLDD+DPWIRTTDFT   AIGR N+YRI + PR+GAKLK+A+ YL
Sbjct: 230  YRTADDDIEETVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYL 289

Query: 538  KERRVS--EIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQ 711
            + RRV+  E   + QL VRDEP+FG   SDPFF +Q+ EGI+F   FLVNA++H+GIINQ
Sbjct: 290  RARRVNVLEDSPKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQ 349

Query: 712  HQLSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQ 891
            HQLS++FF +LR Q  DI N  +L HI SYRHP+FDA +RLKLV  WLLKNPKLL+  K+
Sbjct: 350  HQLSDKFFDLLRSQQKDI-NIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKE 408

Query: 892  SDDTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLN 1071
             DD + VRRLVITP++AYCLP E+ELSNRVLR YKE SDRFLRVTFMDEGMQ +N NVLN
Sbjct: 409  LDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLN 468

Query: 1072 YYVAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAE 1251
            YYVAPIVK ITSNSFPQKT VFKR+  ILT+GF+LCG+KY+FLAFS+NQLRD+SAWFFAE
Sbjct: 469  YYVAPIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAE 528

Query: 1252 VPKILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYI 1431
              K  +V  I+SWMGKF+N++VAKCAARMGQCFSSTYATV VP  E   +  DI RNGY 
Sbjct: 529  -DKKTSVRAIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK-ELPDIKRNGYD 586

Query: 1432 FSDGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMN 1611
            FSDGIGKI PDLA+EVA+KL+L E  PSAYQIRYAGCKGVVA WP D DGIRL  RPSMN
Sbjct: 587  FSDGIGKIVPDLAMEVAEKLKL-EGTPSAYQIRYAGCKGVVACWPSDNDGIRLSWRPSMN 645

Query: 1612 KFESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            KF S+HT LE+ SWTRFQPGFLNRQIVTLL +L VPD
Sbjct: 646  KFLSDHTILEICSWTRFQPGFLNRQIVTLLSALNVPD 682


>ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
          Length = 1196

 Score =  761 bits (1965), Expect = 0.0
 Identities = 378/575 (65%), Positives = 454/575 (78%), Gaps = 1/575 (0%)
 Frame = +1

Query: 1    MGTENSFRANRRR-TVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            MG EN +  NRRR T  PFK ++V VEIG+ + +DEF VSW+ P    DF++DPFD  CK
Sbjct: 111  MGLENPYFLNRRRRTKTPFKLSDVHVEIGSLVRQDEFFVSWRGPPYGVDFIVDPFDGTCK 170

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
              FT DT FSFK   + A IKC+FKVEFL R+I+E++ + D +  V+  +L   S P V 
Sbjct: 171  FCFTMDTAFSFKGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVILLRLT--SSPWVS 228

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI +SVPF LLDD+DPWIRTTDFTP  AIGR N+YR+L+ PR GAKLK+A++YL
Sbjct: 229  YRTADDDIDQSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYL 288

Query: 538  KERRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQ 717
            +ERRV E+ ++    ++DEP+FG   ++PFFS+Q  E I+F   FLVNA++H+G +NQHQ
Sbjct: 289  RERRVKEVCIKWPPRIQDEPDFGMSNTEPFFSIQYEEDISFEIMFLVNAVMHKGTVNQHQ 348

Query: 718  LSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSD 897
            LS+ FF +LR Q  +I N  +L H+ SYR+P+FDA  RLK+VQ WLLKNPKL++  K+ D
Sbjct: 349  LSDSFFHLLRSQPKEI-NVAALKHLCSYRNPVFDACERLKVVQDWLLKNPKLVKDPKRLD 407

Query: 898  DTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYY 1077
            D + VRRLVITPT+AYCLP E+ELSNRVLR+YKE +DRFLRVTFMDEGMQ++N+NVLNYY
Sbjct: 408  DIVEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYY 467

Query: 1078 VAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVP 1257
            VAPIVKEITSNSF QKT VFKR  NIL +GF+LCG+KYTFLAFS+NQLRD+SAWFFAE  
Sbjct: 468  VAPIVKEITSNSFLQKTNVFKRFRNILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECV 527

Query: 1258 KILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFS 1437
             I +V  I SWMGKF+NK+VAKCAARMGQCFSSTYATV VP  E N D  DI RNGYIFS
Sbjct: 528  NI-SVGKITSWMGKFNNKNVAKCAARMGQCFSSTYATVEVPSSEVN-DIPDIERNGYIFS 585

Query: 1438 DGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKF 1617
            DGIG ITPDLALEVA+KL+L  NPP AYQIR+AGCKGVVA WP  GD  RL LR SMNKF
Sbjct: 586  DGIGMITPDLALEVAEKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDRFRLSLRTSMNKF 645

Query: 1618 ESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            ES H TLE+ SWTR+QPGFLNRQI+TLL +LKV D
Sbjct: 646  ESKHATLEICSWTRYQPGFLNRQIITLLSTLKVED 680


>gb|OVA07789.1| RNA recognition motif domain [Macleaya cordata]
          Length = 1200

 Score =  758 bits (1958), Expect = 0.0
 Identities = 376/575 (65%), Positives = 452/575 (78%), Gaps = 1/575 (0%)
 Frame = +1

Query: 1    MGTENSFRAN-RRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            +G E+SF  N RRR+ +PFKF+NV VEIG  +SRDEF + WK P S  DFVIDPFD  CK
Sbjct: 115  LGPESSFHINQRRRSKNPFKFSNVRVEIGTLVSRDEFFIGWKGPLSGVDFVIDPFDSSCK 174

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
            ILFTK+T FS K+    A +KC+FKVE   R+I E++ + D +  ++  QL   S P + 
Sbjct: 175  ILFTKETAFSIKDTTNHAVMKCDFKVELFVREIIEVKKYKDTSSLIMVLQLA--SSPFLF 232

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI+ SVPF LLDDEDPWIRTTDFTP   IGR N YRI +SPRFG+K  +A+SYL
Sbjct: 233  YRTADDDIHVSVPFDLLDDEDPWIRTTDFTPGGVIGRCNCYRISVSPRFGSKFDKAMSYL 292

Query: 538  KERRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQ 717
            KE R+     R QL VR+EP+FG  +SD FF +Q  EGI+F   F+VNA+VH+GI N HQ
Sbjct: 293  KEWRIPNDCPRQQLRVREEPDFGMPSSDSFFCIQFKEGISFELLFMVNAVVHKGIFNIHQ 352

Query: 718  LSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSD 897
            LS+ FF +LR Q+ + VN  +L HI SYR P+FDA +RLKLVQ WLL+NP+L++  K  D
Sbjct: 353  LSDRFFELLRSQTKE-VNVAALAHICSYRRPVFDASKRLKLVQEWLLRNPELIKSCKGHD 411

Query: 898  DTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYY 1077
            D + VRRLVITPT+AYCLP  +ELSNRVLRQYKE +DRFLRVTFMDEG+Q+LN NVL+YY
Sbjct: 412  DNVEVRRLVITPTKAYCLPPAVELSNRVLRQYKEVADRFLRVTFMDEGLQQLNYNVLSYY 471

Query: 1078 VAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVP 1257
            VAPIVK+IT+NSFPQKT V++R+  I  +GF+LCG+KY+FLAFS+NQLRDQSAWFFAE  
Sbjct: 472  VAPIVKDITNNSFPQKTAVYRRVKTIAKDGFYLCGRKYSFLAFSSNQLRDQSAWFFAEGE 531

Query: 1258 KILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFS 1437
            KI  VSNI+SWMGKF++++VAKCAARMGQCFSSTYATV VP  + NP   DI RNGY+FS
Sbjct: 532  KI-KVSNIKSWMGKFNDRNVAKCAARMGQCFSSTYATVEVPTNQINPGLPDIERNGYVFS 590

Query: 1438 DGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKF 1617
            DGIG +TPDLA EVA+KLQL  NPP AYQIR+AGCKGV+A W G  DGIRL LRPSM KF
Sbjct: 591  DGIGMLTPDLAKEVAEKLQLGANPPCAYQIRFAGCKGVIACWEGKDDGIRLSLRPSMIKF 650

Query: 1618 ESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            +S H+ LE+VSWTRFQPGFLNRQI+TLL SL VPD
Sbjct: 651  QSTHSILEIVSWTRFQPGFLNRQIITLLSSLGVPD 685


>ref|XP_007225440.1| RNA-dependent RNA polymerase 6 [Prunus persica]
 ref|XP_020409777.1| RNA-dependent RNA polymerase 6 [Prunus persica]
 gb|ONI34398.1| hypothetical protein PRUPE_1G480300 [Prunus persica]
 gb|ONI34399.1| hypothetical protein PRUPE_1G480300 [Prunus persica]
          Length = 1196

 Score =  756 bits (1953), Expect = 0.0
 Identities = 375/575 (65%), Positives = 451/575 (78%), Gaps = 1/575 (0%)
 Frame = +1

Query: 1    MGTENSFRANRRR-TVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            +G EN +  NRRR T  PFK ++V VEIG+ + +DEF  SW+ P    DF++DPFD  CK
Sbjct: 111  LGPENPYFLNRRRRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGTCK 170

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
              FT DT FSFK   + A IKC+FKVEFL R+I+E++ + D +  V+  +L   S P V 
Sbjct: 171  FCFTMDTAFSFKGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVILLRLT--SSPWVS 228

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI +SVPF LLDD+DPWIRTTDFTP  AIGR N+YR+L+ PR GAKLK+A++YL
Sbjct: 229  YRTADDDIDQSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYL 288

Query: 538  KERRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQ 717
            +ERRV E+ ++    ++DEP+FG   ++PFFS+Q  EGI+F   FLVNA++H+G +NQHQ
Sbjct: 289  RERRVKEVCIKWPPKIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNAVMHKGTVNQHQ 348

Query: 718  LSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSD 897
            LS+ FF +LR Q  +I N  +L H+ SYR P+FDA  RLK+VQ WLLKNPKL++  K+ D
Sbjct: 349  LSDSFFHLLRSQPKEI-NVAALKHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLD 407

Query: 898  DTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYY 1077
            D   VRRLVITPT+AYCLP E+ELSNRVLR+YKE +DRFLRVTFMDEGMQ++N+NVLNYY
Sbjct: 408  DIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYY 467

Query: 1078 VAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVP 1257
            VAPIVKEITSNSF QKT VFKR   IL +GF+LCG+KYTFLAFS+NQLRD+SAWFFAE  
Sbjct: 468  VAPIVKEITSNSFLQKTNVFKRFRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECV 527

Query: 1258 KILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFS 1437
             I +V  I SWMGKF+NK+VAKCAARMGQCFSSTYATV V   E N D  DI RNGY+FS
Sbjct: 528  NI-SVGKITSWMGKFNNKNVAKCAARMGQCFSSTYATVEVTSSEVN-DIPDIKRNGYVFS 585

Query: 1438 DGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKF 1617
            DGIG ITPDLALEVA+KL+L  NPP AYQIR+AGCKGVVA WP  GDG RL LR SMNKF
Sbjct: 586  DGIGMITPDLALEVAEKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDGFRLSLRTSMNKF 645

Query: 1618 ESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            ES HTTLE+ SWTR+QPGFLNRQI+TLL +L V D
Sbjct: 646  ESKHTTLEICSWTRYQPGFLNRQIITLLSTLNVED 680


>ref|XP_002515520.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ricinus communis]
 gb|EEF46969.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  756 bits (1952), Expect = 0.0
 Identities = 377/575 (65%), Positives = 449/575 (78%), Gaps = 1/575 (0%)
 Frame = +1

Query: 1    MGTENSFRAN-RRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            +G EN F  N RRRT  PFK ++V VEIG  +SRDEF+V W+ P S  DF++DPFD  CK
Sbjct: 112  LGPENPFHLNQRRRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCK 171

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
              FT+DT FSFK   E A I+C+FK+EFL RDI+E++ + D +  V+  QL   S PSV 
Sbjct: 172  FCFTRDTAFSFKGTTEHAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLA--SAPSVW 229

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI   VPF LLDD+DPWIRTTDFTP  AIGR N+YR+ + PR GAKLKRAL++L
Sbjct: 230  YRTADDDIEVLVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFL 289

Query: 538  KERRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQ 717
            +ERRV E  LR  L V  EP +    SDPFF + + EG++F+  FLVNA++H+GI NQHQ
Sbjct: 290  RERRVQEDCLRRPLHVTAEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQ 349

Query: 718  LSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSD 897
            LS+ FF +LR Q  D VN  +L HI SY+HP+FDA +RLK VQ WLLKNPKL R +KQ D
Sbjct: 350  LSDSFFDLLRNQPLD-VNIAALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLD 408

Query: 898  DTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYY 1077
            D + +RRL ITPTRAYCLP E+ELSNRVLR+YK+ +D+FLRVTFMDEG+Q +N N L YY
Sbjct: 409  DIVEIRRLAITPTRAYCLPPEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYY 468

Query: 1078 VAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVP 1257
             APIV++ITSNSF QKT +FKR+ +ILT+GF+LCG+KY+FLAFS+NQLRD+SAWFFAE  
Sbjct: 469  CAPIVRDITSNSFSQKTRIFKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDG 528

Query: 1258 KILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFS 1437
            K  +VS IR+WMGKF+N+++AKCAARMGQCFSSTYATV VP  EA  D  DI RN YIFS
Sbjct: 529  K-TSVSKIRNWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFS 587

Query: 1438 DGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKF 1617
            DGIG ITPDLA EVA+KL+L  NPP AYQIRYAGCKGVVA WP   DGIRL LR SMNKF
Sbjct: 588  DGIGMITPDLAKEVAEKLKLEVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKF 647

Query: 1618 ESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
             SNHTTLE+ SWTRFQPGFLNRQI+TLL +L VPD
Sbjct: 648  HSNHTTLEICSWTRFQPGFLNRQIITLLSTLDVPD 682


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
 gb|PNS92354.1| hypothetical protein POPTR_018G028100v3 [Populus trichocarpa]
          Length = 1200

 Score =  755 bits (1950), Expect = 0.0
 Identities = 370/578 (64%), Positives = 456/578 (78%), Gaps = 4/578 (0%)
 Frame = +1

Query: 1    MGTENSFRAN-RRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            +G +N F  N RRRT  PFK ++V  EIGN +SRDEF V W+ P S  DF++DPFD  CK
Sbjct: 112  LGPKNPFTLNQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCK 171

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
              F+++T FS K+  E A IKC+FKVEFL RDI+E+  + + +  V+  QL   S P V 
Sbjct: 172  FCFSRNTAFSLKSTSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLA--SAPWVW 229

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI   VPF LLDD+DPWIRTTDFT   AIGR ++YR+ + PR G+KL++A+ YL
Sbjct: 230  YRTADDDIEAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYL 289

Query: 538  KERRVS---EIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIIN 708
            KERRV    E   R ++ + DEP+FG   SDPFF + + EGI F   FLVNA++H+GI N
Sbjct: 290  KERRVQVLQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFN 349

Query: 709  QHQLSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAK 888
            QHQLS +FF +LR Q  + VN ++L HI +YR P+F+A RRLK VQ WLLKNP L ++ K
Sbjct: 350  QHQLSNDFFDLLRNQHTE-VNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPK 408

Query: 889  QSDDTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVL 1068
            Q  D + +RRLVITPT+AYCLP E+ELSNRVLR+YK+ +DRFLRVTFMDEG+QR+N+NVL
Sbjct: 409  QLGDVVEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVL 468

Query: 1069 NYYVAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFA 1248
            NYYVAPIV++ITSNSFPQKT +FKR+ +ILT GF+LCG++Y+FLAFSANQLRDQSAWFF+
Sbjct: 469  NYYVAPIVRDITSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFS 528

Query: 1249 EVPKILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGY 1428
            E   I +V +++SWMGKF+N+++AKCAARMGQCFSSTYAT+ VPP+E N D  DI RNGY
Sbjct: 529  EERNI-SVLDVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGY 587

Query: 1429 IFSDGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSM 1608
            +FSDGIG ITPDLA EVA+KL+L  +PP AYQIRYAGCKGVVA WPG GDG+RL LRPSM
Sbjct: 588  VFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSM 647

Query: 1609 NKFESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            NKF+SNHTTLE+ SWTRFQPGFLNRQI+TLL +L VPD
Sbjct: 648  NKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNVPD 685


>ref|XP_021822322.1| RNA-dependent RNA polymerase 6 [Prunus avium]
          Length = 1196

 Score =  755 bits (1949), Expect = 0.0
 Identities = 375/575 (65%), Positives = 452/575 (78%), Gaps = 1/575 (0%)
 Frame = +1

Query: 1    MGTENSFRANRRR-TVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            +G EN +  NRRR T  PFK ++V VEIG+ + +DEF VSW+ P    DF++DPFD  CK
Sbjct: 111  LGLENPYFLNRRRRTTTPFKLSDVHVEIGSLVRQDEFFVSWRGPPYGVDFIVDPFDGTCK 170

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
              FT DT FSFK   + A IKC+FKVEFL R+I+E++ + D +  V+  +L   S P V 
Sbjct: 171  FCFTMDTAFSFKGTKKHAVIKCDFKVEFLVREIAEVKQYRDTSYLVILLRLT--SSPWVS 228

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI +SVPF LLDD+DPWIRTTDFTP  AIGR N+YR+L+ PR GAKLK+A++YL
Sbjct: 229  YRTADDDIDQSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYL 288

Query: 538  KERRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQ 717
            + RRV E+ ++    ++DEP+FG   ++PFFS+Q  E I+F   FLVNA++H+G +NQHQ
Sbjct: 289  RGRRVKEVCIKWPPRIQDEPDFGMSNTEPFFSIQYEEDISFEIMFLVNAVMHKGTVNQHQ 348

Query: 718  LSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSD 897
            LS+ FF +LR Q  +I N  +L H+ SYR P+FDA  RLK+VQ WLLKNPKL++  K+ D
Sbjct: 349  LSDSFFHLLRSQPKEI-NVAALKHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLD 407

Query: 898  DTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYY 1077
            D   VRRLVITPT+AYCLP E+ELSNRVLR+YKE +DRFLRVTFMDEGMQ++N+NVLNYY
Sbjct: 408  DIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYY 467

Query: 1078 VAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVP 1257
            VAPIVKEITSNS+ QKT VFKR   IL +GF+LCG+KYTFLAFS+NQLRD+SAWFFAE  
Sbjct: 468  VAPIVKEITSNSYFQKTNVFKRFRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECV 527

Query: 1258 KILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFS 1437
             I +V NI SWMGKF+NK+VAKCAARMGQCFSSTYATV VP  E N D  DI RNGY+FS
Sbjct: 528  NI-SVGNITSWMGKFNNKNVAKCAARMGQCFSSTYATVEVPSSEVN-DIPDIERNGYVFS 585

Query: 1438 DGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKF 1617
            DGIG ITPDLALEVA+KL+L  NPP AYQIR+AGCKGVVA WP   DG RL LR SMNKF
Sbjct: 586  DGIGMITPDLALEVAEKLKLDRNPPCAYQIRFAGCKGVVACWPSKDDGFRLSLRTSMNKF 645

Query: 1618 ESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            ES HTTLE+ SWTR+QPGFLNRQI+TLL +LKV D
Sbjct: 646  ESKHTTLEICSWTRYQPGFLNRQIITLLSTLKVED 680


>ref|XP_018847783.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia]
 ref|XP_018847785.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia]
 ref|XP_018847786.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia]
 ref|XP_018847787.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia]
 ref|XP_018847788.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia]
          Length = 931

 Score =  742 bits (1915), Expect = 0.0
 Identities = 367/575 (63%), Positives = 445/575 (77%), Gaps = 1/575 (0%)
 Frame = +1

Query: 1    MGTENSFRAN-RRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            +G ++ F    RRRT  P K ++V VE+G  +SRDEF V+W+      DF++DPFD  CK
Sbjct: 114  LGFQSPFHLRQRRRTTTPHKLSDVLVEVGTLVSRDEFFVAWRGAPYGVDFLVDPFDGTCK 173

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
              FT+DTVFSFK+  + A IKCNFK+EF+ RDISE++ + D +  V+   L   S P + 
Sbjct: 174  FCFTRDTVFSFKSTSKYAVIKCNFKMEFVVRDISEIKRYNDTSYLVILLHLA--SSPCIW 231

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI ESVP+ LLDD+DPWIRTTDFTP  AIGR ++YR+ + PR G KL+R + YL
Sbjct: 232  YRTADDDIEESVPYDLLDDDDPWIRTTDFTPSGAIGRCSSYRVSIPPRHGVKLRRTMEYL 291

Query: 538  KERRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQ 717
            KE+RV EI L   L +RDEP FG   SDPF+ +Q  +GI F   FLVNA++H+GI +QHQ
Sbjct: 292  KEQRVHEICLEKPLRIRDEPEFGLPLSDPFYCIQYKQGIAFEIMFLVNAVLHKGIFSQHQ 351

Query: 718  LSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSD 897
            LS+ FFS+LR Q  + VN  +L HI SYR P+F+A RRLK VQ WLL+NPKL +  ++ D
Sbjct: 352  LSDNFFSLLRSQPKE-VNIAALKHICSYRRPVFNALRRLKTVQDWLLRNPKLFKSPRRLD 410

Query: 898  DTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYY 1077
            D + VRRLVITP +AYCLP E+ELSNRVLR+YK  +DRFLRVTFMDEGMQ +N+NVLN Y
Sbjct: 411  DIVEVRRLVITPAKAYCLPPEVELSNRVLRKYKGVADRFLRVTFMDEGMQTMNSNVLNSY 470

Query: 1078 VAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVP 1257
            VAPIVK ITSNS+PQKT +F+R+N IL +GFH+CG++Y+FLAFS+NQLRD+SAWFFAE  
Sbjct: 471  VAPIVKLITSNSYPQKTKIFQRVNTILKSGFHVCGREYSFLAFSSNQLRDRSAWFFAEDG 530

Query: 1258 KILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFS 1437
            K   V NIR WMGKF+ K++AKCAARMGQCFSSTYATV VPPKE NP+  DI RN Y FS
Sbjct: 531  KT-NVVNIRKWMGKFTQKNIAKCAARMGQCFSSTYATVEVPPKEVNPELPDIERNNYNFS 589

Query: 1438 DGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKF 1617
            DGIG ITPDLA +VA+KL+L  NPP AYQIRYAG KGVVA WP  GDG+RL LRPSMNKF
Sbjct: 590  DGIGMITPDLANKVAEKLKLDGNPPCAYQIRYAGFKGVVACWPAKGDGVRLSLRPSMNKF 649

Query: 1618 ESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
             S+HTTLE+ SWTRFQPGFLNRQIVTLL +L VPD
Sbjct: 650  ISDHTTLEICSWTRFQPGFLNRQIVTLLSTLNVPD 684


>ref|XP_023881956.1| RNA-dependent RNA polymerase 6 [Quercus suber]
 ref|XP_023881957.1| RNA-dependent RNA polymerase 6 [Quercus suber]
 ref|XP_023881958.1| RNA-dependent RNA polymerase 6 [Quercus suber]
 ref|XP_023881959.1| RNA-dependent RNA polymerase 6 [Quercus suber]
 ref|XP_023881960.1| RNA-dependent RNA polymerase 6 [Quercus suber]
 gb|POE73687.1| rna-dependent rna polymerase 6 [Quercus suber]
          Length = 1200

 Score =  749 bits (1934), Expect = 0.0
 Identities = 371/575 (64%), Positives = 448/575 (77%), Gaps = 1/575 (0%)
 Frame = +1

Query: 1    MGTENSFRAN-RRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            +G EN F  N RRR   P K ++V VEIG+ ++RD+F V+W+ PS   +F++DPFD  CK
Sbjct: 109  LGPENPFCLNKRRRATTPIKLSDVLVEIGSLVNRDDFFVAWRGPSRGVEFLVDPFDGTCK 168

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
              FT+DT F+FK+  + A +KC+FKVEFL RDI+E++ + + +  V+  QL   S P V 
Sbjct: 169  FCFTRDTTFTFKDTGKHAMVKCDFKVEFLVRDINEIKQYREPSYLVILLQL--SSSPWVW 226

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI E+V F LLDD+DPWIRTTDFTP  AIGR N+YR+ + PR+G KL++A+ YL
Sbjct: 227  YRTADDDIEETVSFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRYGRKLEKAIDYL 286

Query: 538  KERRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQ 717
            KERRV E  L+  L +RDEP+FG   SDPFF +Q  EGI F   FLVNA +H+GI NQHQ
Sbjct: 287  KERRVREFCLKSPLRIRDEPDFGLPMSDPFFCIQYKEGIAFEIMFLVNAALHKGIFNQHQ 346

Query: 718  LSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSD 897
            LS  FF +L+ Q+ D VN  +L HI SYR P+FDA +RLK VQ WLL+NPKL +  KQ D
Sbjct: 347  LSGNFFDLLKSQAMD-VNVAALKHICSYRSPVFDASKRLKSVQDWLLRNPKLFKSPKQLD 405

Query: 898  DTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYY 1077
            D + VRRLVITPT+AYCLP E+ELSNRVLR+YKE +DRFLRVTFMDEGMQ +N+NVL+YY
Sbjct: 406  DIVEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTMNSNVLSYY 465

Query: 1078 VAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVP 1257
            VAPIV+EIT NSF QKT +F+R+   L +GFH+CG+KY+FLAFSANQLRD+SAWFFAE  
Sbjct: 466  VAPIVREITLNSFQQKTKIFQRVCTFLRDGFHVCGRKYSFLAFSANQLRDRSAWFFAE-D 524

Query: 1258 KILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFS 1437
            + L+V+NIR WMGKF +K++AKCAARMGQCFSSTYATV VP  E NP   DI RNGY FS
Sbjct: 525  RNLSVNNIRDWMGKFDHKNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYCFS 584

Query: 1438 DGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKF 1617
            DGIG ITPDLA+EVA+KL+L  NPPSAYQIRYAGCKGVVA WP   DG RL LRPSMNKF
Sbjct: 585  DGIGIITPDLAVEVAEKLKLDMNPPSAYQIRYAGCKGVVACWPAKDDGARLSLRPSMNKF 644

Query: 1618 ESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            +S HT LE+ SWTRFQPGFLNRQIVTLL +L V D
Sbjct: 645  QSRHTILEICSWTRFQPGFLNRQIVTLLSTLNVRD 679


>gb|ASZ85186.1| RNA-dependent RNA polymerase 6, partial [Hylocereus polyrhizus]
          Length = 730

 Score =  732 bits (1889), Expect = 0.0
 Identities = 360/576 (62%), Positives = 449/576 (77%), Gaps = 3/576 (0%)
 Frame = +1

Query: 4    GTENSFRANRRR-TVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCKI 180
            G +N FR N+RR  + PFK ++V + +G  +S+D+ +VSW+ P++  DF++DPFDD CK 
Sbjct: 113  GPKNPFRTNKRREAIIPFKLSDVHLNVGTLVSQDQLLVSWRGPAAGLDFLVDPFDDTCKF 172

Query: 181  LFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVHY 360
             F KDTVF+FK   + A IKC++KVEFL RDI+E++ + D + +V+  QL   S P ++Y
Sbjct: 173  CFRKDTVFAFKGEDKKAVIKCDYKVEFLVRDINEVKRYTDFSAWVILLQLA--SAPFIYY 230

Query: 361  RTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYLK 540
            RTA+DDIYESV + LLDD+DPWIRT DFTP  AIGR N+ RI++ PR G  L++A+ YL 
Sbjct: 231  RTANDDIYESVSYDLLDDDDPWIRTMDFTPSRAIGRCNSCRIVIPPRKGPTLEKAIRYLV 290

Query: 541  ERRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQL 720
            ERRV     R QL V+DEPNFG    DPF+ +Q+ EG+ F   FL+NA+VH+GIINQHQL
Sbjct: 291  ERRVPVDHPRQQLKVKDEPNFGMTMWDPFYFVQHEEGVPFEVTFLLNAVVHKGIINQHQL 350

Query: 721  SEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSDD 900
            S+ FF ++RC+S + VN  +L HI SY+ P+FDA +RLK VQ WLLKNP+LL+  K+  D
Sbjct: 351  SDRFFDLIRCKSTE-VNLAALRHICSYKRPLFDAYKRLKEVQSWLLKNPRLLKEPKELTD 409

Query: 901  TIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYYV 1080
             + VRRL+ITPT+AYCLP E+ELSNRVLR YK  +DRFLRVTFMDEGMQ LN+NVL+YY 
Sbjct: 410  VVEVRRLIITPTKAYCLPPEVELSNRVLRHYKHVADRFLRVTFMDEGMQMLNSNVLSYYA 469

Query: 1081 APIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFA--EV 1254
            APIVK IT NSF Q+T VFKRIN+IL +GF+L G+ Y+FLAFS+NQLRD+SAWFFA  + 
Sbjct: 470  APIVKMITLNSFLQRTSVFKRINSILKHGFYLSGRMYSFLAFSSNQLRDRSAWFFAADKR 529

Query: 1255 PKILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIF 1434
             + LTVSNIR WMG+FS+++VAKCAARMGQCFSSTYATV V         EDI RNGY+F
Sbjct: 530  NRNLTVSNIRKWMGEFSDRNVAKCAARMGQCFSSTYATVEVSLDGVESGLEDIKRNGYVF 589

Query: 1435 SDGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNK 1614
            SDGIG ITPDLA+EVA+KLQL +NPP AYQIR+AGCKGVVA WPG  DGIRL+LR SMNK
Sbjct: 590  SDGIGMITPDLAMEVAEKLQLKDNPPCAYQIRFAGCKGVVACWPGKVDGIRLYLRQSMNK 649

Query: 1615 FESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            F S H  LE+ SWTRFQPGFLNRQI+TLL +L+VPD
Sbjct: 650  FHSKHRVLEICSWTRFQPGFLNRQIITLLSALEVPD 685


>gb|PNT33710.1| hypothetical protein POPTR_006G253500v3 [Populus trichocarpa]
 gb|PNT33712.1| hypothetical protein POPTR_006G253500v3 [Populus trichocarpa]
          Length = 929

 Score =  739 bits (1907), Expect = 0.0
 Identities = 360/575 (62%), Positives = 444/575 (77%), Gaps = 1/575 (0%)
 Frame = +1

Query: 1    MGTENSFRAN-RRRTVDPFKFANVSVEIGNQISRDEFVVSWKVPSSAADFVIDPFDDCCK 177
            +G EN F  N RRR   PFK + V VEIG  +SRDEF V W+ P +  DF++DPFD  C+
Sbjct: 112  LGPENPFTLNQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCR 171

Query: 178  ILFTKDTVFSFKNRPEMASIKCNFKVEFLARDISEMRVFVDDAPFVVQFQLVPGSGPSVH 357
              F+++T FSFK+  E A IKC+FKVEFL RDI+E++ + + +  V+  QL   S P V 
Sbjct: 172  FCFSRNTAFSFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLA--SAPRVW 229

Query: 358  YRTADDDIYESVPFSLLDDEDPWIRTTDFTPCAAIGRSNAYRILLSPRFGAKLKRALSYL 537
            YRTADDDI  SVPF LLDD+DPWIRTTDFT   AIGR ++YR+ + PR G KL++A+ +L
Sbjct: 230  YRTADDDIEVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFL 289

Query: 538  KERRVSEIRLRHQLVVRDEPNFGAHTSDPFFSLQNVEGINFSAKFLVNALVHRGIINQHQ 717
            KERRV E  LR  + +RDEP+FG   +DPFF + + EGI F   FLVNA++H+GI NQHQ
Sbjct: 290  KERRVQEEYLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQ 349

Query: 718  LSEEFFSVLRCQSDDIVNETSLMHILSYRHPIFDAPRRLKLVQGWLLKNPKLLRHAKQSD 897
            LS +FF +LR Q  + VN  +L HI  YR P+FDA ++LK+ Q WLLKNPK  ++ K+ D
Sbjct: 350  LSNDFFDLLRNQPTE-VNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLD 408

Query: 898  DTIAVRRLVITPTRAYCLPSELELSNRVLRQYKEFSDRFLRVTFMDEGMQRLNNNVLNYY 1077
            D   +RRLVITPT+AYCLP E+ELSNRVLR+YK+ +DRFLRVTFMDEG+Q +N+N LNY+
Sbjct: 409  DIAEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYF 468

Query: 1078 VAPIVKEITSNSFPQKTIVFKRINNILTNGFHLCGQKYTFLAFSANQLRDQSAWFFAEVP 1257
             APIV+ ITS SFPQKT +FKR+ +ILT GF+LCG++Y+FLAFS+NQLRD+SAWFFAE  
Sbjct: 469  AAPIVRAITSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAE-D 527

Query: 1258 KILTVSNIRSWMGKFSNKSVAKCAARMGQCFSSTYATVNVPPKEANPDFEDITRNGYIFS 1437
            + + V  I+SWMGKF+NK++AKCAARMGQCFSSTYAT+ VPP+E N D  DI RNGY FS
Sbjct: 528  RNINVMAIKSWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFS 587

Query: 1438 DGIGKITPDLALEVADKLQLTENPPSAYQIRYAGCKGVVAVWPGDGDGIRLFLRPSMNKF 1617
            DGIG ITPDLA EVA+KL+   +PP AYQIRYAGCKGVVA WP  GDGIRL LR SMNKF
Sbjct: 588  DGIGMITPDLAREVAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKF 647

Query: 1618 ESNHTTLEVVSWTRFQPGFLNRQIVTLLLSLKVPD 1722
            +SNHT LE+ SWTRFQPGFLNRQI+TLL +L VPD
Sbjct: 648  QSNHTILEICSWTRFQPGFLNRQIITLLSALNVPD 682