BLASTX nr result

ID: Cheilocostus21_contig00030482 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00030482
         (888 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008789336.1| PREDICTED: tetraspanin-19-like isoform X2 [P...    60   2e-07
ref|XP_009394190.1| PREDICTED: tetraspanin-19-like [Musa acumina...    58   3e-07
ref|XP_008789335.1| PREDICTED: tetraspanin-19-like isoform X1 [P...    60   4e-07

>ref|XP_008789336.1| PREDICTED: tetraspanin-19-like isoform X2 [Phoenix dactylifera]
          Length = 173

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/40 (70%), Positives = 29/40 (72%)
 Frame = +2

Query: 605 MMFQVTVLVLSIVLWALGPQPRNHCDGRTVPELTCSFLVV 724
           M+ QV VLVL IVLWALGP PRNHC     P L CSFLVV
Sbjct: 107 MVAQVNVLVLDIVLWALGPPPRNHCGSPATPNLRCSFLVV 146


>ref|XP_009394190.1| PREDICTED: tetraspanin-19-like [Musa acuminata subsp. malaccensis]
          Length = 225

 Score = 44.7 bits (104), Expect(2) = 3e-07
 Identities = 23/36 (63%), Positives = 25/36 (69%)
 Frame = +3

Query: 345 VISRSVEGNTKFVATFVLHANICRLVEVVILLEQVN 452
           VIS   +G+TKFVA F  H NICRLV VVI   QVN
Sbjct: 117 VISGHHDGDTKFVAFFTFHVNICRLVGVVISAAQVN 152



 Score = 39.3 bits (90), Expect(2) = 3e-07
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +2

Query: 185 YIIFISLDLTFQIVGTVQILFKIDWSTV 268
           YI+F+   L FQIV  V++LFKIDW TV
Sbjct: 90  YIVFVCFILLFQIVVIVEVLFKIDWPTV 117



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 34/77 (44%), Positives = 42/77 (54%)
 Frame = +2

Query: 614 QVTVLVLSIVLWALGPQPRNHCDGRTVPELTCSFLVVGGXXXXXXXXXXXXXRQEHLNLE 793
           QV VLV++IVL AL PQ  NHC+G TVP L  SFLV+ G                  N E
Sbjct: 150 QVNVLVMAIVLRALRPQSSNHCEGPTVPALRYSFLVMNGSDSPPGLPAPATPPPGDHNCE 209

Query: 794 PAFRTLLRTAYFRWMNA 844
           PA + + R +  RWM+A
Sbjct: 210 PALK-IFRASEVRWMSA 225


>ref|XP_008789335.1| PREDICTED: tetraspanin-19-like isoform X1 [Phoenix dactylifera]
          Length = 212

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 28/40 (70%), Positives = 29/40 (72%)
 Frame = +2

Query: 605 MMFQVTVLVLSIVLWALGPQPRNHCDGRTVPELTCSFLVV 724
           M+ QV VLVL IVLWALGP PRNHC     P L CSFLVV
Sbjct: 146 MVAQVNVLVLDIVLWALGPPPRNHCGSPATPNLRCSFLVV 185


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