BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00030240
         (980 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinen...   521   0.0  
gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen...   524   e-173
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            502   e-172
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   509   e-167
gb|KYP63120.1| Retrovirus-related Pol polyprotein from transposo...   481   e-166
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo...   504   e-165
gb|KYP77046.1| Retrovirus-related Pol polyprotein from transposo...   466   e-162
gb|KYP50580.1| Retrovirus-related Pol polyprotein from transposo...   469   e-162
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         497   e-162
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           491   e-160
gb|OMO51796.1| Reverse transcriptase, RNA-dependent DNA polymera...   491   e-159
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo...   486   e-158
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo...   486   e-158
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo...   486   e-158
emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]   448   e-155
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]      481   e-155
gb|KYP42640.1| Retrovirus-related Pol polyprotein from transposo...   448   e-154
ref|XP_017609491.1| PREDICTED: retrovirus-related Pol polyprotei...   466   e-152
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]   453   e-151
gb|KYP42630.1| Retrovirus-related Pol polyprotein from transposo...   448   e-150

>gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 501

 Score =  521 bits (1341), Expect = 0.0
 Identities = 247/326 (75%), Positives = 286/326 (87%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF QK+G+DFDEIFSPVVKMTSIR +LG+AAS+DLE+EQLDVKTAFLHGDLEEEIYME
Sbjct: 51   VKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYME 110

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF V+  +HMVCKLKKSLYGLKQAPRQWYKKFDSFM+   Y +TDAD CVY ++F  
Sbjct: 111  QPEGFEVERKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTG 170

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
             +FIILLLYVDDMLIVGKD+ +I  LK +LS SFDMKDLG  K+ILGM I RDR+AKK+W
Sbjct: 171  GNFIILLLYVDDMLIVGKDVSMIRKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLW 230

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ YVE+VLERFNMKEAK VS+PL  HFKLS + CP+ + EK+++  IPY+SAVGSLM
Sbjct: 231  LSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLM 290

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIA+AVG+VSR+L+NPG+ HWEAVKWIL+YL+GTS  CLCFG SEPILEGFT
Sbjct: 291  YAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCFGGSEPILEGFT 350

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGDLD RKSTS YLFTF+GGA+
Sbjct: 351  DADLAGDLDNRKSTSAYLFTFSGGAV 376


>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1340

 Score =  524 bits (1350), Expect = e-173
 Identities = 248/326 (76%), Positives = 288/326 (88%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF QK+G+DFDEIFSPVVKMTSIR +LG+AAS+DLE+EQLDVKTAFLHGDLEEEIYME
Sbjct: 890  VKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYME 949

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF V+G +HMVCKLKKSLYGLKQAPRQWYKKFDSFM+   Y +TDAD CVY ++F  
Sbjct: 950  QPEGFEVEGKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTG 1009

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
             +FIILLLYVDDMLIVGKD+ +I+ LK +LS SFDMKDLG  K+ILGM I RDR+AKK+W
Sbjct: 1010 GNFIILLLYVDDMLIVGKDVSMIHKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLW 1069

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ YVE+VLERFNMKEAK VS+PL  HFKLS + CP+ + EK+++  IPY+SAVGSLM
Sbjct: 1070 LSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLM 1129

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIA+AVG+VSR+L+NPG+ HWEAVKWIL+YL+GTS  CLCFG SEPILEGFT
Sbjct: 1130 YAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCFGGSEPILEGFT 1189

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGDLD RKSTS YLFTF+GGA+
Sbjct: 1190 DADLAGDLDNRKSTSAYLFTFSGGAV 1215


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  502 bits (1293), Expect = e-172
 Identities = 245/326 (75%), Positives = 275/326 (84%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKG  QK+G+DFDEIF+PVVKMTSIR +LGLA  L+LE+EQLDVKTAFLHGDL EEIYME
Sbjct: 240  VKGCHQKKGIDFDEIFAPVVKMTSIRMILGLATCLNLELEQLDVKTAFLHGDLHEEIYME 299

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF VKG E+ VCKLKKSLYGLKQAPRQWY KFDSFM N  Y +T AD CVYF+KF  
Sbjct: 300  QPEGFEVKGKENFVCKLKKSLYGLKQAPRQWYHKFDSFMSNNEYKRTTADPCVYFRKFSE 359

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
             +FIIL LYVDDMLIVG+D+ +I  LK++LS SFDMKDLG  K+ILGM I RDRKA K+W
Sbjct: 360  GNFIILCLYVDDMLIVGQDVEMICRLKEDLSKSFDMKDLGPAKQILGMEIARDRKAGKLW 419

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+E+VLERFNMK AKPV+TPLA HFKLS   CP+ EKEK  + +IPY+S VGSLM
Sbjct: 420  LSQENYIERVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTEKEKESMSHIPYSSVVGSLM 479

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIA+AVG+VSR+LANP K HWEAVKWILRYL+GTS   LCFG  EPILEGFT
Sbjct: 480  YAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKWILRYLRGTSNLSLCFGGGEPILEGFT 539

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGDLD RKSTSGYLF FA GAI
Sbjct: 540  DADMAGDLDNRKSTSGYLFKFARGAI 565


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score =  509 bits (1312), Expect = e-167
 Identities = 244/326 (74%), Positives = 282/326 (86%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF QK+G+DFDEIFSPVVKMTSIR +L LAASLDLE+EQLDVKTAFLHGDLEEEIYME
Sbjct: 880  VKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYME 939

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF V G +HMVCKL KSLYGLKQAPRQWY KFDSFM +Q Y KT +D CVYFK+F  
Sbjct: 940  QPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSE 999

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            ++FIILLLYVDDMLIVGKD  LI  LK +LS SFDMKDLG  ++ILGM I+R+R ++K+W
Sbjct: 1000 NNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLW 1059

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+E+VLERFNMK AKPVSTPLAGH KLS   CP+  +EK  +  +PY+SAVGSLM
Sbjct: 1060 LSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLM 1119

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIA+AVG+VSRFL NPGK HWEAVKWILRYL+GT+  CLCFG S+PIL+G+T
Sbjct: 1120 YAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYT 1179

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGD+D RKS++GYLFTF+GGAI
Sbjct: 1180 DADMAGDIDNRKSSTGYLFTFSGGAI 1205


>gb|KYP63120.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 501

 Score =  481 bits (1239), Expect = e-166
 Identities = 228/326 (69%), Positives = 275/326 (84%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGFSQ++G+DF++IFSPVVKM+SIR +LG+AA+ DLEIEQLDVKTAFLHGDLEEEI ME
Sbjct: 51   VKGFSQEKGIDFEKIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEICME 110

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF V G +++VC+L KSLYGLKQAPRQWYKKF+ FM    + +T++DHCV+ K++ +
Sbjct: 111  QPEGFKVPGKQNLVCRLTKSLYGLKQAPRQWYKKFEFFMAEHEFKRTESDHCVFIKRYAS 170

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
              F+ILLLYVDDMLIVG+D   I  LKK+LS SF MKDLG  K+ILGM I RDR  + +W
Sbjct: 171  GDFLILLLYVDDMLIVGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLW 230

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+E+VLE+FNM + KPV+TPLAGHF+LSS Q P++E+E  E+K IPY+S VGSLM
Sbjct: 231  LSQERYIEKVLEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLM 290

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAMICTRPDIAYAVG+VSRFLANPG  HW AVKWILRYL+GTS  CLCFG  +P+LEG+T
Sbjct: 291  YAMICTRPDIAYAVGVVSRFLANPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLEGYT 350

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGD+D RKSTSGYL TF GGA+
Sbjct: 351  DADLAGDIDSRKSTSGYLTTFVGGAV 376


>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1321

 Score =  504 bits (1298), Expect = e-165
 Identities = 242/326 (74%), Positives = 282/326 (86%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGFSQKQG+DF+EIFSPVVKM SIR +LGL AS+DLE+EQLDVKTAFLHGDL+EEIYME
Sbjct: 877  VKGFSQKQGIDFEEIFSPVVKMCSIRVILGLVASMDLELEQLDVKTAFLHGDLDEEIYME 936

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF VKG E MVCKLKKSLYGLKQAPRQWYKKFDSF+ +Q + +TDAD CVY  ++PN
Sbjct: 937  QPEGFEVKGKEDMVCKLKKSLYGLKQAPRQWYKKFDSFIKSQGFKRTDADPCVYINRYPN 996

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
              F+ILLLYVDDMLIVG+D+ +I  LK ELS +FDMKD+G  K ILGM I+RDRKA K+W
Sbjct: 997  GKFLILLLYVDDMLIVGQDVQMIKNLKVELSKAFDMKDMGAAKHILGMDIIRDRKAGKLW 1056

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+E+VLERFNMK AKPV TPL GHFKLS   CP+    + ++  IPY+SAVGSLM
Sbjct: 1057 LSQERYIERVLERFNMKNAKPVITPLVGHFKLSKKSCPT---IREKMSTIPYSSAVGSLM 1113

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIA+AVG+VSR+L+NPGK+HWEAVKWILRYL+GTS  CL FG ++PILEG+T
Sbjct: 1114 YAMVCTRPDIAHAVGVVSRYLSNPGKTHWEAVKWILRYLRGTSKLCLRFGGAKPILEGYT 1173

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGDLD RKSTSGY+FTF+GGAI
Sbjct: 1174 DADMAGDLDDRKSTSGYIFTFSGGAI 1199


>gb|KYP77046.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 382

 Score =  466 bits (1200), Expect = e-162
 Identities = 222/326 (68%), Positives = 268/326 (82%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF Q++GVDF+EIFSPVV+MTSIR VL LAA+LDLE+EQ+DVKT FLHGDLEEEIYM+
Sbjct: 56   VKGFRQRKGVDFNEIFSPVVRMTSIRTVLSLAATLDLEVEQMDVKTTFLHGDLEEEIYMK 115

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QP+GF+++G E  VC+L+KSLYGLKQAPRQWYKKF+S M  Q Y KT +DHCV+ +KF +
Sbjct: 116  QPDGFLIEGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVRKFSD 175

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            D FIILLLYVDDMLIVGKD+  I+ LKK+   SF MKD+G  KKILG++I+RDRK KK+W
Sbjct: 176  DDFIILLLYVDDMLIVGKDVSKIDRLKKQSGESFAMKDMGADKKILGISIIRDRKDKKLW 235

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LS + Y+++VL+RF M+  K VSTPLA HFKLS  QCPSNE EK  +  +PYASAVGSLM
Sbjct: 236  LSHEHYIQKVLQRFQMENVKAVSTPLAAHFKLSVKQCPSNEAEKIIMSRVPYASAVGSLM 295

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIA+AVG VSRFL+NP + HW  VKWILRYL+GTS   L FG  +P L G++
Sbjct: 296  YAMVCTRPDIAHAVGTVSRFLSNPCREHWNVVKWILRYLRGTSGLKLYFGGDKPTLVGYS 355

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            D+D AGD+D RKSTSGYL  FAGG +
Sbjct: 356  DSDMAGDIDSRKSTSGYLVKFAGGVV 381


>gb|KYP50580.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 478

 Score =  469 bits (1208), Expect = e-162
 Identities = 221/326 (67%), Positives = 271/326 (83%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF Q++GVDF+EIFSPVV+M+SIR +L LA +LDLE+E++DVKT FLHGDLEEEIYM+
Sbjct: 77   VKGFRQRKGVDFNEIFSPVVRMSSIRTMLSLATTLDLEVEKMDVKTIFLHGDLEEEIYMK 136

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QP+GF+++G E  VC+L+KSLYGLKQAPRQWYKKF+S M  Q+Y KT +DHCV+ +KF +
Sbjct: 137  QPDGFLIEGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMCEQDYKKTTSDHCVFVRKFSD 196

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            D FIILLLYVDDMLIVGKD+  I+ LKK+L  SF MKD+G  KKILG++I+RDRK KK+W
Sbjct: 197  DDFIILLLYVDDMLIVGKDVSKIDRLKKQLGESFSMKDMGAAKKILGISIIRDRKDKKLW 256

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y++ VL+RF+M+  K VSTPLA HFKLS  QCPSNE EK  +  +PYA AVGSLM
Sbjct: 257  LSQEHYIQNVLQRFHMENVKAVSTPLAAHFKLSVKQCPSNEVEKINMSRVPYAYAVGSLM 316

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIA+AVG VSRFL+NPG+ HW AVKWILRYL+GTS   L FG  +P L G++
Sbjct: 317  YAMVCTRPDIAHAVGTVSRFLSNPGREHWNAVKWILRYLRGTSGLKLYFGGDKPTLVGYS 376

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            D+D AGD+D RKSTSGYL  FAGG +
Sbjct: 377  DSDMAGDIDSRKSTSGYLVKFAGGVV 402


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  497 bits (1279), Expect = e-162
 Identities = 235/326 (72%), Positives = 279/326 (85%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGFSQK+G+DFDEIFSPVVK +SIR VLGLAA LD+EIEQ+DVKTAFLHGDL+EEIYME
Sbjct: 878  VKGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEIEQMDVKTAFLHGDLDEEIYME 937

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF VKG E  VC+LKKSLYGLKQAPRQWYKKF S M    Y KT +DHCV+  ++ +
Sbjct: 938  QPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKTSSDHCVFVNRYSD 997

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            D F+ILLLYVDDMLIVG++   I  LK+ELS SF MKD+G  K+ILGM I+RDR+ KK+W
Sbjct: 998  DDFVILLLYVDDMLIVGRNASRIQELKQELSKSFSMKDMGPAKQILGMKIIRDRQNKKLW 1057

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+E+VLERF+M EAKPVSTPL  HFKL   QCPS+EKEK E++ +PY+SAVGSLM
Sbjct: 1058 LSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLM 1117

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIA+AVG+VSRFL+NPG+ HW+AVKWILRYL+GTS+  LCFGT +PIL G+T
Sbjct: 1118 YAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTGKPILTGYT 1177

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            D+D AGD+D RKSTSGYL T+AGGA+
Sbjct: 1178 DSDMAGDIDTRKSTSGYLITYAGGAV 1203


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  491 bits (1264), Expect = e-160
 Identities = 232/326 (71%), Positives = 279/326 (85%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF+Q++G+DFDEIFSPVVKMTSIR VLGLAASL+LE+EQ+DVKTAFLHGDLEEEIYME
Sbjct: 881  VKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAASLNLEVEQMDVKTAFLHGDLEEEIYME 940

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QP+GF  KG E  VC+L+KSLYGLKQAPRQWYKKF+S M    Y KT +DHCV+ +KF +
Sbjct: 941  QPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGYKKTTSDHCVFAQKFSD 1000

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            D FIILLLYVDDMLIVG+++  IN LK++LS  F MKDLG  K+ILGM IMRDR+AKK+W
Sbjct: 1001 DDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKDLGPAKQILGMRIMRDREAKKLW 1060

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+E+VL+RFNM++ K VS PLA HF+LS+ Q PS + E+ +++ IPYASAVGSLM
Sbjct: 1061 LSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLM 1120

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIA+AVG+VSRFL+NPGK HW+AVKWILRYL+GTS  CLCFG   P+L G+T
Sbjct: 1121 YAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGEDNPVLVGYT 1180

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGD+D RKSTSGYL  F+GGA+
Sbjct: 1181 DADMAGDVDSRKSTSGYLINFSGGAV 1206


>gb|OMO51796.1| Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
            capsularis]
          Length = 1500

 Score =  491 bits (1263), Expect = e-159
 Identities = 241/326 (73%), Positives = 282/326 (86%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF+QK  +DFDEIFSPVVKM+SIR VLGLAASL+LEIEQLDVKTAFLHGDL+EEIYM+
Sbjct: 974  VKGFAQKACIDFDEIFSPVVKMSSIRVVLGLAASLNLEIEQLDVKTAFLHGDLQEEIYMD 1033

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF VKG EHMVC+LKKSLYGLKQA RQWYKKFDSFM++  + +T  D CVYF+ F N
Sbjct: 1034 QPEGFKVKGKEHMVCRLKKSLYGLKQALRQWYKKFDSFMVSHLFKRTATDPCVYFRSFGN 1093

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            + FIILLLYVDDMLIVG+D+ LI+ LK +LS SFDMKDLG  K+ILGM I+RDRKA K+W
Sbjct: 1094 N-FIILLLYVDDMLIVGQDVELISKLKDDLSRSFDMKDLGPAKQILGMDIIRDRKAGKLW 1152

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ YVE++L+RFNM++AK VSTPLA HFKL+   CP +EK+K+E+  I Y+S VGSLM
Sbjct: 1153 LSQEKYVERILKRFNMQDAKSVSTPLANHFKLTKKSCPVSEKKKDEMAVILYSSVVGSLM 1212

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            Y M+CTRPDIA+AVG++SRFL+NPGK HWEAVKWI RYL+GTS  CL F TS+ ILEGFT
Sbjct: 1213 YLMVCTRPDIAHAVGVMSRFLSNPGKVHWEAVKWIFRYLRGTSKMCLSFETSQTILEGFT 1272

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGDLD RKSTSGY+FTFAGGA+
Sbjct: 1273 DADMAGDLDSRKSTSGYIFTFAGGAV 1298


>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  486 bits (1251), Expect = e-158
 Identities = 230/326 (70%), Positives = 276/326 (84%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF Q++G+DF+EIFSPVVKM+SIR +LG+AA+ DLEIEQLDVKTAFLHGDLEEEIYME
Sbjct: 855  VKGFGQEKGIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEIYME 914

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF V G E++VC+L KSLYGLKQAPRQWYKKF+SFM    + KT++DHCV+ K++ +
Sbjct: 915  QPEGFKVPGKENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYAS 974

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
              F+ILLLYVDDMLI G+D   I  LKK+LS SF MKDLG  K+ILGM I RDR  + +W
Sbjct: 975  GDFLILLLYVDDMLIFGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLW 1034

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+E+VLE+FNM + KPV+TPLAGHF+LSS Q P++E+E  E+K IPY+S VGSLM
Sbjct: 1035 LSQERYIEKVLEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLM 1094

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAMICTRPDIAYAVG+VSRFLA+PG  HW AVKWILRYL+GTS  CLCFG  +P+L+G+T
Sbjct: 1095 YAMICTRPDIAYAVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYT 1154

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGD+D RKSTSGYL TFAGGA+
Sbjct: 1155 DADLAGDIDSRKSTSGYLTTFAGGAV 1180


>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  486 bits (1251), Expect = e-158
 Identities = 230/326 (70%), Positives = 276/326 (84%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF Q++G+DF+EIFSPVVKM+SIR +LG+AA+ DLEIEQLDVKTAFLHGDLEEEIYME
Sbjct: 855  VKGFGQEKGIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEIYME 914

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF V G E++VC+L KSLYGLKQAPRQWYKKF+SFM    + KT++DHCV+ K++ +
Sbjct: 915  QPEGFKVPGKENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYAS 974

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
              F+ILLLYVDDMLI G+D   I  LKK+LS SF MKDLG  K+ILGM I RDR  + +W
Sbjct: 975  GDFLILLLYVDDMLIFGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLW 1034

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+E+VLE+FNM + KPV+TPLAGHF+LSS Q P++E+E  E+K IPY+S VGSLM
Sbjct: 1035 LSQERYIEKVLEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLM 1094

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAMICTRPDIAYAVG+VSRFLA+PG  HW AVKWILRYL+GTS  CLCFG  +P+L+G+T
Sbjct: 1095 YAMICTRPDIAYAVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYT 1154

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGD+D RKSTSGYL TFAGGA+
Sbjct: 1155 DADLAGDIDSRKSTSGYLTTFAGGAV 1180


>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score =  486 bits (1250), Expect = e-158
 Identities = 237/326 (72%), Positives = 267/326 (81%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKG +QK+G+DF+EIFSPVVKMTSIRA+LGLAA LDLEIEQLDVKTAFLHGDLEEEIYME
Sbjct: 865  VKGCNQKKGIDFEEIFSPVVKMTSIRAILGLAAKLDLEIEQLDVKTAFLHGDLEEEIYME 924

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGF   G EH+VC+LKKSLYGLKQAPRQWYKKFD FM   N+ KT AD CV+ K + N
Sbjct: 925  QPEGFAEPGKEHLVCRLKKSLYGLKQAPRQWYKKFDLFMAQHNFKKTSADQCVFVKNYEN 984

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
               IILLLYVDDMLIVGKD   I  LKK LS SF MKDLG  KKILGM I+RDR  + +W
Sbjct: 985  GESIILLLYVDDMLIVGKDKTKIAALKKALSKSFAMKDLGSVKKILGMKIIRDRSKRMLW 1044

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            +SQ+ Y+++VLERFNM  AK V  PL GH KLS  QCP NE EK E+  +PY+SAVGSLM
Sbjct: 1045 MSQEDYIKKVLERFNMHNAKSVHVPLPGHLKLSKKQCPVNE-EKEEMSKVPYSSAVGSLM 1103

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIAYAVG+VSRFL+NPGK HW AVKWILRYLKGT+ +CLCFG    +L G++
Sbjct: 1104 YAMVCTRPDIAYAVGVVSRFLSNPGKEHWNAVKWILRYLKGTAKSCLCFGNGNLMLTGYS 1163

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            DAD AGD+D RKSTSGYL TFAGGAI
Sbjct: 1164 DADMAGDVDSRKSTSGYLITFAGGAI 1189


>emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]
          Length = 384

 Score =  448 bits (1152), Expect = e-155
 Identities = 218/324 (67%), Positives = 264/324 (81%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            +KGF QK+GVDF+EIF PVVKM+SIR V    A L+LEIEQLD KTAFLHG LEEEIYME
Sbjct: 51   MKGFGQKRGVDFEEIFFPVVKMSSIRVV---NAQLNLEIEQLDDKTAFLHGVLEEEIYME 107

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            Q EGF VKG E+ V KL+K+LY LKQAPRQWYKKFDSFM++  Y++T +DHCV+ K+F +
Sbjct: 108  QLEGFKVKGKENFVYKLRKNLYRLKQAPRQWYKKFDSFMISHGYNRTTSDHCVFTKRFSD 167

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            D FIILLLYVDDMLI+  D   I  LK+ELS SF MKDLG  K+ILGM I  DRK +K+W
Sbjct: 168  DDFIILLLYVDDMLIIDHDASKIEKLKRELSKSFAMKDLGYAKQILGMKISHDRKNEKLW 227

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+E++LERFN+ +AK V +PLAGHFKL S QCP++EKE  E+  +PY+S VG+LM
Sbjct: 228  LSQEAYIEKILERFNISKAKIVGSPLAGHFKLISKQCPTSEKENEEMSKVPYSSVVGNLM 287

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            +AM+CTRPDIA+AV +VSRFL+NP K HW A+KWILRYL+GTS  CLCFG+ EPIL+G++
Sbjct: 288  HAMVCTRPDIAHAVRVVSRFLSNPRKEHWAALKWILRYLRGTSRMCLCFGSGEPILKGYS 347

Query: 80   DADWAGDLDGRKSTSGYLFTFAGG 9
            DAD AGDLD RKST  +L TFAGG
Sbjct: 348  DADMAGDLDSRKSTLRFLMTFAGG 371


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score =  481 bits (1238), Expect = e-155
 Identities = 228/326 (69%), Positives = 277/326 (84%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF Q++G+DF+EIFSPVVKM+SIR VL LAA+LDLE+EQ+DVKTAFLHGDLEEEIYM+
Sbjct: 824  VKGFRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMK 883

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QP+GF+V+G E  VC+L+KSLYGLKQAPRQWYKKF+S M  Q Y KT +DHCV+ KKF N
Sbjct: 884  QPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFAN 943

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            D FIILLLYVDD+LIVGKDI +IN LKK+LS SF MKD+G  K+ILG+ IMRDR+ KK+W
Sbjct: 944  DDFIILLLYVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLW 1003

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ YV++VL+RF M+ AK VSTPLA HFKLS+ Q PS E EK++++ IPYASAVGSLM
Sbjct: 1004 LSQENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLM 1063

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPDIA+ VG VSRF++NPG+ HW AVKWILRYL+GT+   LCFG  +P L G+T
Sbjct: 1064 YAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFGGDKPTLVGYT 1123

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            D+D  GD+D R+STSGY+  FAGGA+
Sbjct: 1124 DSDMGGDIDSRRSTSGYVIKFAGGAV 1149


>gb|KYP42640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 448

 Score =  448 bits (1153), Expect = e-154
 Identities = 216/326 (66%), Positives = 260/326 (79%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF Q+  VDF+EIFSPVVKM+SIR VL L A+LDLE+EQ+DVKTAFLHG+LEEEIYM+
Sbjct: 51   VKGFRQRNDVDFNEIFSPVVKMSSIRTVLSLVATLDLEVEQMDVKTAFLHGNLEEEIYMK 110

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QP+GF+V+G E  VC+L+KSLYGLKQAPRQWYKKF+SFM  Q Y KT +DHCV+ KKF +
Sbjct: 111  QPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESFMCEQGYKKTTSDHCVFVKKFSD 170

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            D FIILLLYVDDMLIV KD+  I+ LKK+L  +F MKDLG  KKILG++I    K KK+W
Sbjct: 171  DDFIILLLYVDDMLIVEKDVSRIDRLKKQLGEAFAMKDLGAAKKILGISI----KEKKLW 226

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+++VL+RF M+ +K V TPLA HFKLS  Q PSNE EK  +  +PY  AVGSLM
Sbjct: 227  LSQEHYIKKVLQRFQMENSKVVGTPLAAHFKLSVKQSPSNEAEKTYMSKVPYVYAVGSLM 286

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            Y M+CTRPD+AY VG VSRFL+NP + HW AVKWILRYL GTS   LCFG  +P L G++
Sbjct: 287  YPMVCTRPDVAYVVGTVSRFLSNPSREHWNAVKWILRYLHGTSGLRLCFGGDKPTLVGYS 346

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            ++D AGD+D RKSTSGYL  FAGG +
Sbjct: 347  NSDMAGDVDSRKSTSGYLINFAGGVV 372


>ref|XP_017609491.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Gossypium arboreum]
          Length = 1184

 Score =  466 bits (1199), Expect = e-152
 Identities = 221/326 (67%), Positives = 270/326 (82%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKG++QK+GVDF+EIFSPVVKM+SIR +L LAA  DLE+EQ+DVK AFLHGDLE+E+YME
Sbjct: 734  VKGYTQKKGVDFEEIFSPVVKMSSIRTILSLAACYDLEVEQMDVKIAFLHGDLEDELYME 793

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QPEGFV +  E  VC+LKKSLYGLKQAPRQWYKKF+S M  Q+Y KT +DHCV+ KKF  
Sbjct: 794  QPEGFVAQRKEDYVCRLKKSLYGLKQAPRQWYKKFESVMGEQSYKKTTSDHCVFVKKFSG 853

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            D FIILLLYVDDMLIVG++   I  LK+ELS SF MKDLG  K+ILG+ + RDRKAKK+W
Sbjct: 854  DDFIILLLYVDDMLIVGQNASRIEKLKQELSKSFAMKDLGPAKQILGIRLTRDRKAKKLW 913

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+E+VL++F+M +AK V+TP A HF+LS    PS EKEK E++ IPY+SAVGSLM
Sbjct: 914  LSQERYIEKVLQKFSMDKAKAVNTPFAMHFRLSVKHSPSTEKEKEEMQKIPYSSAVGSLM 973

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            YAM+CTRPD+AYAVG VSRFL+N G+ HW AVKWI+RYL+GTS   LCFG  +P+  G+T
Sbjct: 974  YAMVCTRPDLAYAVGTVSRFLSNLGREHWNAVKWIMRYLRGTSNMKLCFGNEKPVTVGYT 1033

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            D+D AGD+D R+STSGYL T+AGGA+
Sbjct: 1034 DSDMAGDIDSRRSTSGYLITYAGGAV 1059


>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
          Length = 809

 Score =  453 bits (1165), Expect = e-151
 Identities = 215/326 (65%), Positives = 268/326 (82%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF Q +G+DFDEIFSPVVKM+ IR VLGLAASLDLEIEQ+DVKT FLHGDL++EIYME
Sbjct: 359  VKGFIQNKGIDFDEIFSPVVKMSFIRVVLGLAASLDLEIEQMDVKTTFLHGDLDKEIYME 418

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            Q EGF++KG E   CKLKKSLYGLKQAPRQWYKKF+S M  Q Y KT ++HCV+  KF +
Sbjct: 419  QLEGFIIKGKEDYACKLKKSLYGLKQAPRQWYKKFESVMGEQGYKKTTSNHCVFVHKFSD 478

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            D F+ILLLYVDD+LIVG+++  I+ LKK+LS SF MKDLG  KKILG+ I RDR +KK++
Sbjct: 479  DDFVILLLYVDDILIVGRNVSRIDKLKKQLSKSFSMKDLGPVKKILGIRIERDRASKKLY 538

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            +SQ+ Y+E+VLERFNM +AK V++PLA HFKLS    PS +KEK +++ +PYASAVGSLM
Sbjct: 539  MSQEQYIEKVLERFNMSKAKVVNSPLASHFKLSRRHSPSIDKEKEDMRRVPYASAVGSLM 598

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
              M+CTRPDIAY +G+VSRFL+NPG+ HWEAVKWI+RYL+GTS   L F + +P+L  +T
Sbjct: 599  NPMVCTRPDIAYVIGVVSRFLSNPGRLHWEAVKWIMRYLQGTSKLKLTFESGKPVLVSYT 658

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            D++ AGD+D R+ T GYL TF+GGA+
Sbjct: 659  DSNMAGDVDNRRPTLGYLMTFSGGAV 684


>gb|KYP42630.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 701

 Score =  448 bits (1153), Expect = e-150
 Identities = 216/326 (66%), Positives = 260/326 (79%)
 Frame = -1

Query: 980  VKGFSQKQGVDFDEIFSPVVKMTSIRAVLGLAASLDLEIEQLDVKTAFLHGDLEEEIYME 801
            VKGF Q+  VDF+EIFSPVVKM+SIR VL L A+LDLE+EQ+DVKTAFLHG+LEEEIYM+
Sbjct: 304  VKGFRQRNDVDFNEIFSPVVKMSSIRTVLSLVATLDLEVEQMDVKTAFLHGNLEEEIYMK 363

Query: 800  QPEGFVVKGSEHMVCKLKKSLYGLKQAPRQWYKKFDSFMMNQNYHKTDADHCVYFKKFPN 621
            QP+GF+V+G E  VC+L+KSLYGLKQAPRQWYKKF+SFM  Q Y KT +DHCV+ KKF +
Sbjct: 364  QPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESFMCEQGYKKTTSDHCVFVKKFSD 423

Query: 620  DSFIILLLYVDDMLIVGKDICLINMLKKELSNSFDMKDLGQTKKILGMTIMRDRKAKKIW 441
            D FIILLLYVDDMLIV KD+  I+ LKK+L  +F MKDLG  KKILG++I    K KK+W
Sbjct: 424  DDFIILLLYVDDMLIVEKDVSRIDRLKKQLGEAFAMKDLGAAKKILGISI----KEKKLW 479

Query: 440  LSQKTYVEQVLERFNMKEAKPVSTPLAGHFKLSSMQCPSNEKEKNEVKNIPYASAVGSLM 261
            LSQ+ Y+++VL+RF M+ +K V TPLA HFKLS  Q PSNE EK  +  +PY  AVGSLM
Sbjct: 480  LSQEHYIKKVLQRFQMENSKVVGTPLAAHFKLSVKQSPSNEAEKTYMSKVPYVYAVGSLM 539

Query: 260  YAMICTRPDIAYAVGMVSRFLANPGKSHWEAVKWILRYLKGTSAACLCFGTSEPILEGFT 81
            Y M+CTRPD+AY VG VSRFL+NP + HW AVKWILRYL GTS   LCFG  +P L G++
Sbjct: 540  YPMVCTRPDVAYVVGTVSRFLSNPSREHWNAVKWILRYLHGTSGLRLCFGGDKPTLVGYS 599

Query: 80   DADWAGDLDGRKSTSGYLFTFAGGAI 3
            ++D AGD+D RKSTSGYL  FAGG +
Sbjct: 600  NSDMAGDVDSRKSTSGYLINFAGGVV 625