BLASTX nr result

ID: Cheilocostus21_contig00030031 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00030031
         (1050 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018682764.1| PREDICTED: RNA-binding protein 28 isoform X2...    76   3e-11
ref|XP_009399368.1| PREDICTED: RNA-binding protein 28 isoform X1...    76   3e-11
ref|XP_020091972.1| RNA-binding protein 28 isoform X1 [Ananas co...    65   8e-08
gb|OAY75116.1| RNA-binding protein 28 [Ananas comosus]                 65   8e-08
ref|XP_008792245.1| PREDICTED: RNA-binding protein 28 isoform X3...    63   4e-07
ref|XP_020091974.1| RNA-binding protein 28 isoform X2 [Ananas co...    62   7e-07
ref|XP_008792244.1| PREDICTED: RNA-binding protein 28 isoform X2...    62   1e-06
ref|XP_008792243.1| PREDICTED: RNA-binding protein 28 isoform X1...    62   1e-06
ref|XP_011092825.1| RNA-binding protein 28 isoform X2 [Sesamum i...    60   3e-06

>ref|XP_018682764.1| PREDICTED: RNA-binding protein 28 isoform X2 [Musa acuminata subsp.
            malaccensis]
          Length = 984

 Score = 75.9 bits (185), Expect = 3e-11
 Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
 Frame = +3

Query: 780  ATVEDAERSIKLKNGSNKDGRKIRVKLAKYRLPREERKLKIKN---ENNDTKNDKIVHPE 950
            ATVEDAERSI+LKN    DGRKI VKLAK+RLP EER+ K KN   ++ DTK+++I+H  
Sbjct: 71   ATVEDAERSIQLKNRLAVDGRKISVKLAKHRLPLEERQQKAKNVHSDDIDTKHNEILHST 130

Query: 951  SEIESKGRPQPHDISCDITE-SSGCIDDGE 1037
            S  E KG  +  D     T+     +DDG+
Sbjct: 131  SVTEHKGCLRAQDTGSYTTKPPRSIVDDGK 160


>ref|XP_009399368.1| PREDICTED: RNA-binding protein 28 isoform X1 [Musa acuminata subsp.
            malaccensis]
 ref|XP_009399376.1| PREDICTED: RNA-binding protein 28 isoform X1 [Musa acuminata subsp.
            malaccensis]
          Length = 987

 Score = 75.9 bits (185), Expect = 3e-11
 Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
 Frame = +3

Query: 780  ATVEDAERSIKLKNGSNKDGRKIRVKLAKYRLPREERKLKIKN---ENNDTKNDKIVHPE 950
            ATVEDAERSI+LKN    DGRKI VKLAK+RLP EER+ K KN   ++ DTK+++I+H  
Sbjct: 71   ATVEDAERSIQLKNRLAVDGRKISVKLAKHRLPLEERQQKAKNVHSDDIDTKHNEILHST 130

Query: 951  SEIESKGRPQPHDISCDITE-SSGCIDDGE 1037
            S  E KG  +  D     T+     +DDG+
Sbjct: 131  SVTEHKGCLRAQDTGSYTTKPPRSIVDDGK 160


>ref|XP_020091972.1| RNA-binding protein 28 isoform X1 [Ananas comosus]
          Length = 945

 Score = 65.5 bits (158), Expect = 8e-08
 Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = +3

Query: 780  ATVEDAERSIKLKNGSNKDGRKIRVKLAKYRLPREERKLKIKNENND---TKNDKIVHPE 950
            A   DAER+I+LKNGS   GRKIRVKLA +RLPRE+R  K KN N++    +N+K+    
Sbjct: 68   AAASDAERAIELKNGSAISGRKIRVKLAMHRLPREQRSQKEKNVNSEDSTLQNEKVDQSS 127

Query: 951  SEIESKGRPQPHDISCDITESSGCIDD 1031
               E+K   Q      + TE++G I D
Sbjct: 128  RARENKETSQE-----EKTETAGAIKD 149


>gb|OAY75116.1| RNA-binding protein 28 [Ananas comosus]
          Length = 945

 Score = 65.5 bits (158), Expect = 8e-08
 Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = +3

Query: 780  ATVEDAERSIKLKNGSNKDGRKIRVKLAKYRLPREERKLKIKNENND---TKNDKIVHPE 950
            A   DAER+I+LKNGS   GRKIRVKLA +RLPRE+R  K KN N++    +N+K+    
Sbjct: 68   AAASDAERAIELKNGSAISGRKIRVKLAMHRLPREQRSQKEKNVNSEDSTLQNEKVDQSS 127

Query: 951  SEIESKGRPQPHDISCDITESSGCIDD 1031
               E+K   Q      + TE++G I D
Sbjct: 128  RARENKETSQE-----EKTETAGAIKD 149


>ref|XP_008792245.1| PREDICTED: RNA-binding protein 28 isoform X3 [Phoenix dactylifera]
          Length = 917

 Score = 63.2 bits (152), Expect = 4e-07
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +3

Query: 777 SATVEDAERSIKLKNGSNKDGRKIRVKLAKYRLPREERKLKIKNE 911
           SA+VEDAER+I+LKNGS   GRKI+VKLA +RLP E+RK K KNE
Sbjct: 5   SASVEDAERAIQLKNGSAIGGRKIKVKLAMHRLPLEQRKKKAKNE 49


>ref|XP_020091974.1| RNA-binding protein 28 isoform X2 [Ananas comosus]
          Length = 942

 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
 Frame = +3

Query: 780  ATVEDAERSIKLKNGSNKDGRKIRVKLAKYRLPREERKLKIKNENND---TKNDKIVHPE 950
            A   DAER+I+LKNGS   GRKIRVKLA +RLPRE+R  K KN N++    +N+K+    
Sbjct: 68   AAASDAERAIELKNGSAISGRKIRVKLAMHRLPREQRSQKEKNVNSEDSTLQNEKVDQSS 127

Query: 951  SEIESKGRPQPHDISCDITESSGCIDD 1031
               E+K   Q         E +G I D
Sbjct: 128  RARENKETSQ--------EEKTGAIKD 146


>ref|XP_008792244.1| PREDICTED: RNA-binding protein 28 isoform X2 [Phoenix dactylifera]
          Length = 980

 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +3

Query: 780 ATVEDAERSIKLKNGSNKDGRKIRVKLAKYRLPREERKLKIKNE 911
           A+VEDAER+I+LKNGS   GRKI+VKLA +RLP E+RK K KNE
Sbjct: 72  ASVEDAERAIQLKNGSAIGGRKIKVKLAMHRLPLEQRKKKAKNE 115


>ref|XP_008792243.1| PREDICTED: RNA-binding protein 28 isoform X1 [Phoenix dactylifera]
          Length = 983

 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +3

Query: 780 ATVEDAERSIKLKNGSNKDGRKIRVKLAKYRLPREERKLKIKNE 911
           A+VEDAER+I+LKNGS   GRKI+VKLA +RLP E+RK K KNE
Sbjct: 72  ASVEDAERAIQLKNGSAIGGRKIKVKLAMHRLPLEQRKKKAKNE 115


>ref|XP_011092825.1| RNA-binding protein 28 isoform X2 [Sesamum indicum]
          Length = 943

 Score = 60.5 bits (145), Expect = 3e-06
 Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
 Frame = +3

Query: 780  ATVEDAERSIKLKNGSNKDGRKIRVKLAKYRLPREERKLKIKNENNDTKNDKIV------ 941
            A V+DA+R+I+LKNGS   GRK+ VK A +R P E+R+ K+  +   T+NDK V      
Sbjct: 67   AAVDDAKRAIELKNGSTVGGRKVVVKQATHRAPLEQRRGKVNEDAGHTENDKAVGTAVDK 126

Query: 942  -HPESEIESKGRPQPHDISCDITESSGCIDDGE 1037
                S I++KG  +  D       S+G +D+G+
Sbjct: 127  IDKSSNIKAKG--ESRDKRKGTAVSTGLLDEGK 157


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